RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 MRAP2Q96G30 205 aa13.08□□□□□ -0.32
LIMD2-209ENST00000580222 DNAJC30Q96LL9 226 aa13.08□□□□□ -0.32
LIMD2-209ENST00000580222 EREGO14944 169 aa13.07□□□□□ -0.32
LIMD2-209ENST00000580222 NCR2O95944 276 aa13.07□□□□□ -0.32
LIMD2-209ENST00000580222 MRPL51Q4U2R6 128 aaKnown RBP13.07□□□□□ -0.32
LIMD2-209ENST00000580222 NIT2Q9NQR4 276 aa13.07□□□□□ -0.32
LIMD2-209ENST00000580222 UBE2D3P61077 147 aa13.06□□□□□ -0.32
LIMD2-209ENST00000580222 UBE2D2P62837 147 aa13.06□□□□□ -0.32
LIMD2-209ENST00000580222 ELOBQ15370 118 aa13.06□□□□□ -0.32
LIMD2-209ENST00000580222 OR10J3Q5JRS4 329 aa13.06□□□□□ -0.32
LIMD2-209ENST00000580222 CBLN2Q8IUK8 224 aa13.06□□□□□ -0.32
LIMD2-209ENST00000580222 RPL39LQ96EH5 51 aaKnown RBP13.06□□□□□ -0.32
LIMD2-209ENST00000580222 SMCO4Q9NRQ5 59 aa13.06□□□□□ -0.32
LIMD2-209ENST00000580222 RNF213Q63HN8 5207 aa13.06□□□□□ -0.32
LIMD2-209ENST00000580222 TGIF2-C20orf24A0A0A6YYL0 155 aa13.05□□□□□ -0.32
LIMD2-209ENST00000580222 SMKR1H3BMG3 65 aa13.05□□□□□ -0.32
LIMD2-209ENST00000580222 GCSHP23434 173 aa13.05□□□□□ -0.32
LIMD2-209ENST00000580222 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.05□□□□□ -0.32
LIMD2-209ENST00000580222 ATP6V1G1O75348 118 aa13.04□□□□□ -0.32
LIMD2-209ENST00000580222 COX19Q49B96 90 aa13.04□□□□□ -0.32
LIMD2-209ENST00000580222 SERTAD4-AS1Q5TG53 156 aa13.04□□□□□ -0.32
LIMD2-209ENST00000580222 LYPD5Q6UWN5 251 aa13.04□□□□□ -0.32
LIMD2-209ENST00000580222 TMEM136Q6ZRR5 245 aa13.04□□□□□ -0.32
LIMD2-209ENST00000580222 IGHV3-38A0A0C4DH36 116 aa13.03□□□□□ -0.32
LIMD2-209ENST00000580222 GAS8-AS1O95177 125 aa13.03□□□□□ -0.32
LIMD2-209ENST00000580222 HLA-DQA1P01909 254 aa13.03□□□□□ -0.32
LIMD2-209ENST00000580222 CKS2P33552 79 aa13.03□□□□□ -0.32
LIMD2-209ENST00000580222 GTSF1LQ9H1H1 148 aa13.03□□□□□ -0.32
LIMD2-209ENST00000580222 TRBV24-1A0A075B6N3 115 aa13.02□□□□□ -0.33
LIMD2-209ENST00000580222 D6R8Y8 96 aa13.02□□□□□ -0.33
LIMD2-209ENST00000580222 SIVA1O15304 175 aa13.01□□□□□ -0.33
LIMD2-209ENST00000580222 PPP1R17O96001 155 aa13.01□□□□□ -0.33
LIMD2-209ENST00000580222 RPS10P46783 165 aaKnown RBP13.01□□□□□ -0.33
LIMD2-209ENST00000580222 DAZ4Q86SG3 579 aaKnown RBP13.01□□□□□ -0.33
LIMD2-209ENST00000580222 GNB1LQ9BYB4 327 aa13.01□□□□□ -0.33
LIMD2-209ENST00000580222 ST20Q9HBF5 79 aa13.01□□□□□ -0.33
LIMD2-209ENST00000580222 DAZ3Q9NR90 486 aaKnown RBP13.01□□□□□ -0.33
LIMD2-209ENST00000580222 FAM30AQ9NZY2 134 aa13.01□□□□□ -0.33
LIMD2-209ENST00000580222 TRBV6-5A0A0K0K1A5 114 aa13□□□□□ -0.33
LIMD2-209ENST00000580222 PPBPP02775 128 aa13□□□□□ -0.33
LIMD2-209ENST00000580222 MT-ND6P03923 174 aa13□□□□□ -0.33
LIMD2-209ENST00000580222 S100A1P23297 94 aa13□□□□□ -0.33
LIMD2-209ENST00000580222 TIRAPP58753 221 aa13□□□□□ -0.33
LIMD2-209ENST00000580222 ORMDL3Q8N138 153 aa13□□□□□ -0.33
LIMD2-209ENST00000580222 YPEL4Q96NS1 127 aa13□□□□□ -0.33
LIMD2-209ENST00000580222 SDHAF1A6NFY7 115 aa12.99□□□□□ -0.33
LIMD2-209ENST00000580222 APCSP02743 223 aa12.99□□□□□ -0.33
LIMD2-209ENST00000580222 LELP1Q5T871 98 aa12.99□□□□□ -0.33
LIMD2-209ENST00000580222 NRACQ8N912 160 aa12.99□□□□□ -0.33
LIMD2-209ENST00000580222 PRELID3AQ96N28 172 aa12.98□□□□□ -0.33
LIMD2-209ENST00000580222 SCO1O75880 301 aa12.97□□□□□ -0.33
LIMD2-209ENST00000580222 TNFRSF6BO95407 300 aa12.97□□□□□ -0.33
LIMD2-209ENST00000580222 TMEM97Q5BJF2 176 aa12.97□□□□□ -0.33
LIMD2-209ENST00000580222 MRPL18Q9H0U6 180 aaKnown RBP12.97□□□□□ -0.33
LIMD2-209ENST00000580222 TRAV8-6A0A0B4J262 113 aa12.96□□□□□ -0.33
LIMD2-209ENST00000580222 NPYP01303 97 aa12.96□□□□□ -0.33
LIMD2-209ENST00000580222 SUMO2P61956 95 aaKnown RBP12.96□□□□□ -0.33
LIMD2-209ENST00000580222 COTL1Q14019 142 aa12.96□□□□□ -0.33
LIMD2-209ENST00000580222 KIAA1644Q3SXP7 199 aa12.96□□□□□ -0.33
LIMD2-209ENST00000580222 TMEM70Q9BUB7 260 aa12.96□□□□□ -0.33
LIMD2-209ENST00000580222 PLA2G2DQ9UNK4 145 aa12.96□□□□□ -0.33
LIMD2-209ENST00000580222 PHOX2AO14813 284 aa12.95□□□□□ -0.34
LIMD2-209ENST00000580222 PMCHP20382 165 aa12.95□□□□□ -0.34
LIMD2-209ENST00000580222 WFDC10BQ8IUB3 73 aa12.95□□□□□ -0.34
LIMD2-209ENST00000580222 DEFB104AQ8WTQ1 72 aa12.95□□□□□ -0.34
LIMD2-209ENST00000580222 LAMTOR2Q9Y2Q5 125 aa12.95□□□□□ -0.34
LIMD2-209ENST00000580222 TRAPPC1Q9Y5R8 145 aa12.95□□□□□ -0.34
LIMD2-209ENST00000580222 TRBV6-8A0A0A6YYG3 113 aa12.94□□□□□ -0.34
LIMD2-209ENST00000580222 FABP9Q0Z7S8 132 aa12.94□□□□□ -0.34
LIMD2-209ENST00000580222 C20orf78Q9BR46 151 aa12.94□□□□□ -0.34
LIMD2-209ENST00000580222 TRBV25-1A0A075B6N4 114 aa12.93□□□□□ -0.34
LIMD2-209ENST00000580222 I3L3M4 83 aa12.93□□□□□ -0.34
LIMD2-209ENST00000580222 POLR2KP53803 58 aaKnown RBP12.93□□□□□ -0.34
LIMD2-209ENST00000580222 NFE4Q86UQ8 179 aa12.93□□□□□ -0.34
LIMD2-209ENST00000580222 IGHV1-24A0A0C4DH33 117 aa12.92□□□□□ -0.34
LIMD2-209ENST00000580222 AMTP48728 403 aa12.92□□□□□ -0.34
LIMD2-209ENST00000580222 NTM-AS1Q6ZSK4 140 aa12.92□□□□□ -0.34
LIMD2-209ENST00000580222 SMIM2Q9BVW6 85 aa12.92□□□□□ -0.34
LIMD2-209ENST00000580222 MAP1LC3AQ9H492 121 aa12.92□□□□□ -0.34
LIMD2-209ENST00000580222 IGLV5-52A0A0A0MRZ9 124 aa12.91□□□□□ -0.34
LIMD2-209ENST00000580222 TRBV27A0A0K0K1C4 114 aa12.91□□□□□ -0.34
LIMD2-209ENST00000580222 VCYO14598 125 aa12.91□□□□□ -0.34
LIMD2-209ENST00000580222 CHCHD5Q9BSY4 110 aa12.91□□□□□ -0.34
LIMD2-209ENST00000580222 FCER1GP30273 86 aa12.9□□□□□ -0.34
LIMD2-209ENST00000580222 RPL32P62910 135 aaKnown RBP12.9□□□□□ -0.34
LIMD2-209ENST00000580222 KIR2DL4Q99706 377 aa12.9□□□□□ -0.34
LIMD2-209ENST00000580222 LOC389332A0A1B0GUA5 103 aa12.89□□□□□ -0.35
LIMD2-209ENST00000580222 IQCJQ1A5X6 159 aa12.89□□□□□ -0.35
LIMD2-209ENST00000580222 TMEM243Q9BU79 118 aa12.89□□□□□ -0.35
LIMD2-209ENST00000580222 LRCOL1A6NCL2 159 aa12.88□□□□□ -0.35
LIMD2-209ENST00000580222 TSHBP01222 138 aa12.88□□□□□ -0.35
LIMD2-209ENST00000580222 PLA2G1BP04054 148 aaKnown RBP12.88□□□□□ -0.35
LIMD2-209ENST00000580222 LINC00528Q8N1L1 170 aa12.88□□□□□ -0.35
LIMD2-209ENST00000580222 ALKBH7Q9BT30 221 aaPredicted RBP12.88□□□□□ -0.35
LIMD2-209ENST00000580222 COLCA2A8K830 154 aa12.87□□□□□ -0.35
LIMD2-209ENST00000580222 UBE2L6O14933 153 aa12.87□□□□□ -0.35
LIMD2-209ENST00000580222 NIT1Q86X76 327 aa12.87□□□□□ -0.35
LIMD2-209ENST00000580222 TMEM262E9PQX1 116 aa12.86□□□□□ -0.35
LIMD2-209ENST00000580222 TCAPO15273 167 aa12.86□□□□□ -0.35
LIMD2-209ENST00000580222 IGHV3-30P01768 117 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms