RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 PGLYRP1O75594 196 aaPredicted RBP1.73□□□□□ -2.13
SNORD53-201ENST00000579969 LEPROTL1O95214 131 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 OXTP01178 125 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 IGKCP01834 107 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 MGST1P10620 155 aaKnown RBP1.73□□□□□ -2.13
SNORD53-201ENST00000579969 LGALS3P17931 250 aaKnown RBP1.73□□□□□ -2.13
SNORD53-201ENST00000579969 GATA2P23769 480 aaPredicted RBP1.73□□□□□ -2.13
SNORD53-201ENST00000579969 NDPQ00604 133 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 RPL18AQ02543 176 aaKnown RBP1.73□□□□□ -2.13
SNORD53-201ENST00000579969 C12orf74Q32Q52 190 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 SCGB1D4Q6XE38 83 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 ZNF818PQ6ZRF7 136 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 LINC00305Q7Z4B0 112 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 TMEM61Q8N0U2 210 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 CEND1Q8N111 149 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 LINC00311Q8N616 119 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 DEFB104AQ8WTQ1 72 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 FMC1Q96HJ9 113 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 CHCHD5Q9BSY4 110 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 SLC25A2Q9BXI2 301 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 LINC00574Q9H8X3 128 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 NXT2Q9NPJ8 142 aaKnown RBP1.73□□□□□ -2.13
SNORD53-201ENST00000579969 CALYQ9NYX4 217 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 ZNF581Q9P0T4 197 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 HIGD1BQ9P298 99 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 IL36RNQ9UBH0 155 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 Q9UF83 564 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 F11RQ9Y624 299 aaKnown RBP1.73□□□□□ -2.13
SNORD53-201ENST00000579969 FAT4Q6V0I7 4981 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 NACAE9PAV3 2078 aa1.73□□□□□ -2.13
SNORD53-201ENST00000579969 TNXBP22105 4242 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 IGKV1-27A0A075B6S5 117 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 TRAV4A0A0B4J268 109 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 IGHV4-28A0A0C4DH34 117 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 IGKV1-12A0A0C4DH73 117 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 TRBV7-7A0A0K0K1E9 115 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 RBAKDNA6NC62 111 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 PGPA6NDG6 321 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 C9JCJ5 164 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 H3BT86 120 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 H3BUA1 57 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 H3BVH4 76 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 UBE2L6O14933 153 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 NDUFS5O43920 106 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 GAS8-AS1O95177 125 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 IGKV1D-12P01611 117 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 IAPPP10997 89 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 HLA-DRB4P13762 266 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 FUSP35637 526 aaKnown RBP eCLIP1.72□□□□□ -2.13
SNORD53-201ENST00000579969 PSMB2P49721 201 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 SUB1P53999 127 aaKnown RBP eCLIP1.72□□□□□ -2.13
SNORD53-201ENST00000579969 ATP5EP56381 51 aaPredicted RBP1.72□□□□□ -2.13
SNORD53-201ENST00000579969 KRTAP10-1P60331 282 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 HERVK_113P61574 105 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 ERVK-16P61578 105 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 RPL30P62888 115 aaKnown RBP1.72□□□□□ -2.13
SNORD53-201ENST00000579969 PLGLAQ15195 96 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 PIGYQ3MUY2 71 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 LINC01559Q495D7 138 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 SPANXN5Q5MJ07 72 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 TMEM170BQ5T4T1 132 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 CFAP126Q5VTH2 177 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 Q5XG85 94 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 ZNF493Q6ZR52 646 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 MMD2Q8IY49 270 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 Q8IYB0 196 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 RNF182Q8N6D2 247 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 THAP8Q8NA92 274 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 Q8NAQ8 132 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 NPBQ8NG41 125 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 USMG5Q96IX5 58 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 PAXXQ9BUH6 204 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 NPCDR1Q9BY65 106 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 CCL28Q9NRJ3 127 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 NHP2Q9NX24 153 aaKnown RBP1.72□□□□□ -2.13
SNORD53-201ENST00000579969 EPDR1Q9UM22 224 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 HLA-DRB4X5D2U9 266 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 MUC2Q02817 5179 aa1.72□□□□□ -2.13
SNORD53-201ENST00000579969 IGKV1D-13A0A0B4J2D9 117 aa1.71□□□□□ -2.14
SNORD53-201ENST00000579969 LOC107984156A0A0G2JMH3 177 aa1.71□□□□□ -2.14
SNORD53-201ENST00000579969 UBE2L5PA0A1B0GUS4 154 aa1.71□□□□□ -2.14
SNORD53-201ENST00000579969 hDV102S1A0JD36 115 aa1.71□□□□□ -2.14
SNORD53-201ENST00000579969 PMS2P5A8MQ11 134 aa1.71□□□□□ -2.14
SNORD53-201ENST00000579969 F8W735 103 aaPredicted RBP1.71□□□□□ -2.14
SNORD53-201ENST00000579969 SMKR1H3BMG3 65 aa1.71□□□□□ -2.14
SNORD53-201ENST00000579969 H3BP45 60 aa1.71□□□□□ -2.14
SNORD53-201ENST00000579969 NDUFA3O95167 84 aa1.71□□□□□ -2.14
SNORD53-201ENST00000579969 IGKV1-39P01597 117 aa1.71□□□□□ -2.14
SNORD53-201ENST00000579969 IGKV1-5P01602 117 aa1.71□□□□□ -2.14
SNORD53-201ENST00000579969 PLA2G1BP04054 148 aaKnown RBP1.71□□□□□ -2.14
SNORD53-201ENST00000579969 IGKV1D-39P04432 117 aa1.71□□□□□ -2.14
SNORD53-201ENST00000579969 TCRAP04437 139 aa1.71□□□□□ -2.14
SNORD53-201ENST00000579969 IGKV1-13P0DP09 117 aa1.71□□□□□ -2.14
SNORD53-201ENST00000579969 MIFP14174 115 aa1.71□□□□□ -2.14
SNORD53-201ENST00000579969 NPPCP23582 126 aa1.71□□□□□ -2.14
SNORD53-201ENST00000579969 ZNF134P52741 427 aa1.71□□□□□ -2.14
SNORD53-201ENST00000579969 ZNF137PP52743 207 aa1.71□□□□□ -2.14
SNORD53-201ENST00000579969 DAD1P61803 113 aa1.71□□□□□ -2.14
SNORD53-201ENST00000579969 HAMPP81172 84 aa1.71□□□□□ -2.14
SNORD53-201ENST00000579969 DAZ2Q13117 558 aaKnown RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms