RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 A6NDX4 124 aa6.36□□□□□ -1.39
RPAIN-215ENST00000575112 F8P00451 2351 aa6.36□□□□□ -1.39
RPAIN-215ENST00000575112 ZNF469Q96JG9 3925 aaPredicted RBP6.36□□□□□ -1.39
RPAIN-215ENST00000575112 CRLF1O75462 422 aa6.36□□□□□ -1.39
RPAIN-215ENST00000575112 PF4P02776 101 aa6.36□□□□□ -1.39
RPAIN-215ENST00000575112 STHQ8IWL8 128 aa6.36□□□□□ -1.39
RPAIN-215ENST00000575112 A8MZ25 164 aa6.35□□□□□ -1.39
RPAIN-215ENST00000575112 LYRM7Q5U5X0 104 aa6.35□□□□□ -1.39
RPAIN-215ENST00000575112 Q6ZSV7 163 aa6.35□□□□□ -1.39
RPAIN-215ENST00000575112 TMEM61Q8N0U2 210 aa6.35□□□□□ -1.39
RPAIN-215ENST00000575112 DAND5Q8N907 189 aa6.35□□□□□ -1.39
RPAIN-215ENST00000575112 ESM1Q9NQ30 184 aa6.35□□□□□ -1.39
RPAIN-215ENST00000575112 NOTCH1P46531 2555 aa6.35□□□□□ -1.39
RPAIN-215ENST00000575112 TRBV20-1A0A075B6N2 111 aa6.35□□□□□ -1.39
RPAIN-215ENST00000575112 CFC1BP0CG36 223 aa6.35□□□□□ -1.39
RPAIN-215ENST00000575112 CFC1P0CG37 223 aa6.35□□□□□ -1.39
RPAIN-215ENST00000575112 PLNP26678 52 aa6.35□□□□□ -1.39
RPAIN-215ENST00000575112 C9orf47Q6ZRZ4 202 aa6.35□□□□□ -1.39
RPAIN-215ENST00000575112 WFDC10AQ9H1F0 79 aa6.35□□□□□ -1.39
RPAIN-215ENST00000575112 A0A0J9YXV3 536 aa6.35□□□□□ -1.39
RPAIN-215ENST00000575112 ANKRD29Q8N6D5 301 aa6.35□□□□□ -1.39
RPAIN-215ENST00000575112 Q9UF83 564 aa6.35□□□□□ -1.39
RPAIN-215ENST00000575112 IGLV4-69A0A075B6H9 119 aa6.34□□□□□ -1.39
RPAIN-215ENST00000575112 IGHV1OR15-1A0A075B7D0 117 aa6.34□□□□□ -1.39
RPAIN-215ENST00000575112 ZNRF2Q8NHG8 242 aa6.34□□□□□ -1.39
RPAIN-215ENST00000575112 DEFB130BP0DP73 79 aa6.34□□□□□ -1.39
RPAIN-215ENST00000575112 DEFB130AP0DP74 79 aa6.34□□□□□ -1.39
RPAIN-215ENST00000575112 UBE2D1P51668 147 aa6.34□□□□□ -1.39
RPAIN-215ENST00000575112 NDUFA11Q86Y39 141 aa6.34□□□□□ -1.39
RPAIN-215ENST00000575112 GPHB5Q86YW7 130 aa6.34□□□□□ -1.39
RPAIN-215ENST00000575112 DLX4Q92988 240 aaPredicted RBP6.34□□□□□ -1.39
RPAIN-215ENST00000575112 TOMM6Q96B49 74 aa6.34□□□□□ -1.39
RPAIN-215ENST00000575112 RNASE3P12724 160 aaKnown RBP6.34□□□□□ -1.4
RPAIN-215ENST00000575112 A0A0J9YY99 117 aa6.33□□□□□ -1.4
RPAIN-215ENST00000575112 VCYO14598 125 aa6.33□□□□□ -1.4
RPAIN-215ENST00000575112 SCGB1A1P11684 91 aa6.33□□□□□ -1.4
RPAIN-215ENST00000575112 C3orf56Q8N813 242 aa6.33□□□□□ -1.4
RPAIN-215ENST00000575112 SMR3AQ99954 134 aa6.33□□□□□ -1.4
RPAIN-215ENST00000575112 COX6CP09669 75 aa6.33□□□□□ -1.4
RPAIN-215ENST00000575112 TRAV8-3A0A0A6YYJ7 113 aa6.33□□□□□ -1.4
RPAIN-215ENST00000575112 GAGE12JA6NER3 117 aa6.33□□□□□ -1.4
RPAIN-215ENST00000575112 PLA2G2AP14555 144 aa6.33□□□□□ -1.4
RPAIN-215ENST00000575112 GAGE4Q13068 117 aa6.33□□□□□ -1.4
RPAIN-215ENST00000575112 GAGE5Q13069 117 aa6.33□□□□□ -1.4
RPAIN-215ENST00000575112 B5MCH6 92 aa6.32□□□□□ -1.4
RPAIN-215ENST00000575112 DEFB4AO15263 64 aa6.32□□□□□ -1.4
RPAIN-215ENST00000575112 UBE2D3P61077 147 aa6.32□□□□□ -1.4
RPAIN-215ENST00000575112 UBE2D2P62837 147 aa6.32□□□□□ -1.4
RPAIN-215ENST00000575112 VPREB3Q9UKI3 123 aa6.32□□□□□ -1.4
RPAIN-215ENST00000575112 APCP25054 2843 aa6.32□□□□□ -1.4
RPAIN-215ENST00000575112 TRAV4A0A0B4J268 109 aa6.32□□□□□ -1.4
RPAIN-215ENST00000575112 CHCHD5Q9BSY4 110 aa6.32□□□□□ -1.4
RPAIN-215ENST00000575112 UNC79Q9P2D8 2635 aa6.32□□□□□ -1.4
RPAIN-215ENST00000575112 TRGV4A0A0C4DH28 118 aa6.32□□□□□ -1.4
RPAIN-215ENST00000575112 NHLRC4P0CG21 123 aaPredicted RBP6.32□□□□□ -1.4
RPAIN-215ENST00000575112 TAL2Q16559 108 aa6.32□□□□□ -1.4
RPAIN-215ENST00000575112 ZNF48Q96MX3 618 aaPredicted RBP6.32□□□□□ -1.4
RPAIN-215ENST00000575112 RBAKDNA6NC62 111 aa6.31□□□□□ -1.4
RPAIN-215ENST00000575112 C9JAW5 83 aa6.31□□□□□ -1.4
RPAIN-215ENST00000575112 GAGE7O76087 117 aa6.31□□□□□ -1.4
RPAIN-215ENST00000575112 GAGE12FP0CL80 117 aa6.31□□□□□ -1.4
RPAIN-215ENST00000575112 GAGE12GP0CL81 117 aa6.31□□□□□ -1.4
RPAIN-215ENST00000575112 GAGE12IP0CL82 117 aa6.31□□□□□ -1.4
RPAIN-215ENST00000575112 IGHV3-30P01768 117 aa6.31□□□□□ -1.4
RPAIN-215ENST00000575112 IGHV3-30-5P0DP03 117 aa6.31□□□□□ -1.4
RPAIN-215ENST00000575112 TEX49A0A1B0GTD5 131 aa6.31□□□□□ -1.4
RPAIN-215ENST00000575112 CIRBPQ14011 172 aaKnown RBP6.31□□□□□ -1.4
RPAIN-215ENST00000575112 CLPSL2Q6UWE3 100 aa6.31□□□□□ -1.4
RPAIN-215ENST00000575112 TRAV12-1A0A0B4J245 112 aa6.3□□□□□ -1.4
RPAIN-215ENST00000575112 A4D1N5 150 aa6.3□□□□□ -1.4
RPAIN-215ENST00000575112 AMELXQ99217 191 aa6.3□□□□□ -1.4
RPAIN-215ENST00000575112 A0A0J9YX75 114 aa6.3□□□□□ -1.4
RPAIN-215ENST00000575112 PAPPA-AS1Q5QFB9 102 aa6.3□□□□□ -1.4
RPAIN-215ENST00000575112 TEN1Q86WV5 123 aa6.3□□□□□ -1.4
RPAIN-215ENST00000575112 U3KQE9 123 aa6.3□□□□□ -1.4
RPAIN-215ENST00000575112 LINC00315P59091 139 aa6.3□□□□□ -1.4
RPAIN-215ENST00000575112 NOP10Q9NPE3 64 aaKnown RBP6.29□□□□□ -1.4
RPAIN-215ENST00000575112 PEMTQ9UBM1 199 aa6.29□□□□□ -1.4
RPAIN-215ENST00000575112 LINC01619G3V211 115 aa6.29□□□□□ -1.4
RPAIN-215ENST00000575112 CCDC179H3BU77 68 aa6.29□□□□□ -1.4
RPAIN-215ENST00000575112 PMVKQ15126 192 aa6.29□□□□□ -1.4
RPAIN-215ENST00000575112 CITED2Q99967 270 aaPredicted RBP6.29□□□□□ -1.4
RPAIN-215ENST00000575112 ANAPC13Q9BS18 74 aa6.29□□□□□ -1.4
RPAIN-215ENST00000575112 IGIPA6NJ69 53 aa6.29□□□□□ -1.4
RPAIN-215ENST00000575112 NDUFA7O95182 113 aa6.28□□□□□ -1.4
RPAIN-215ENST00000575112 IGHV4-31P0DP07 118 aa6.28□□□□□ -1.4
RPAIN-215ENST00000575112 DEFB113Q30KQ7 82 aa6.28□□□□□ -1.4
RPAIN-215ENST00000575112 DCANP1Q8TF63 244 aa6.28□□□□□ -1.4
RPAIN-215ENST00000575112 NTN5Q8WTR8 489 aaPredicted RBP6.28□□□□□ -1.4
RPAIN-215ENST00000575112 ERG28Q9UKR5 140 aa6.28□□□□□ -1.4
RPAIN-215ENST00000575112 IGHV4-4A0A075B6R2 117 aa6.28□□□□□ -1.4
RPAIN-215ENST00000575112 TRBV7-9A0A0J9YWB2 115 aa6.28□□□□□ -1.4
RPAIN-215ENST00000575112 PPDPFLQ8WWR9 84 aa6.28□□□□□ -1.4
RPAIN-215ENST00000575112 SLC25A20O43772 301 aa6.28□□□□□ -1.4
RPAIN-215ENST00000575112 PSMB8P28062 276 aa6.28□□□□□ -1.4
RPAIN-215ENST00000575112 ZNF415Q09FC8 603 aa6.28□□□□□ -1.4
RPAIN-215ENST00000575112 ZNF843Q8N446 348 aa6.28□□□□□ -1.4
RPAIN-215ENST00000575112 C10orf126Q8N4M7 172 aa6.28□□□□□ -1.4
RPAIN-215ENST00000575112 TRGV11A0A075B6L2 103 aa6.27□□□□□ -1.41
RPAIN-215ENST00000575112 A8MWV9 139 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 205.2 ms