RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 TSPAN13O95857 204 aa7.47□□□□□ -1.21
SMG6-213ENST00000573166 CRIP1P50238 77 aa7.47□□□□□ -1.21
SMG6-213ENST00000573166 C10orf126Q8N4M7 172 aa7.47□□□□□ -1.21
SMG6-213ENST00000573166 IGHV1-24A0A0C4DH33 117 aa7.46□□□□□ -1.21
SMG6-213ENST00000573166 ANGP03950 147 aaKnown RBP7.46□□□□□ -1.21
SMG6-213ENST00000573166 CCL18P55774 89 aa7.46□□□□□ -1.21
SMG6-213ENST00000573166 PRO0255Q9UI72 69 aa7.46□□□□□ -1.21
SMG6-213ENST00000573166 IGHV3-64A0A075B6Q5 118 aa7.46□□□□□ -1.22
SMG6-213ENST00000573166 SS18Q15532 418 aa7.46□□□□□ -1.22
SMG6-213ENST00000573166 IGLL5B9A064 214 aa7.46□□□□□ -1.22
SMG6-213ENST00000573166 PRM2P04554 102 aa7.46□□□□□ -1.22
SMG6-213ENST00000573166 PRR9Q5T870 116 aa7.46□□□□□ -1.22
SMG6-213ENST00000573166 KLLNB2CW77 178 aa7.45□□□□□ -1.22
SMG6-213ENST00000573166 PLNP26678 52 aa7.45□□□□□ -1.22
SMG6-213ENST00000573166 FHL3Q13643 280 aa7.45□□□□□ -1.22
SMG6-213ENST00000573166 LYRM9A8MSI8 78 aa7.45□□□□□ -1.22
SMG6-213ENST00000573166 Q6ZQT7 251 aa7.44□□□□□ -1.22
SMG6-213ENST00000573166 IGHV4-28A0A0C4DH34 117 aa7.44□□□□□ -1.22
SMG6-213ENST00000573166 UTP20O75691 2785 aaKnown RBP7.44□□□□□ -1.22
SMG6-213ENST00000573166 TRBV7-3A0A075B6L6 115 aa7.44□□□□□ -1.22
SMG6-213ENST00000573166 TRAV4A0A0B4J268 109 aa7.44□□□□□ -1.22
SMG6-213ENST00000573166 G3V4G9 280 aa7.44□□□□□ -1.22
SMG6-213ENST00000573166 OCIAD2Q56VL3 154 aa7.44□□□□□ -1.22
SMG6-213ENST00000573166 SH2D6Q7Z4S9 175 aa7.44□□□□□ -1.22
SMG6-213ENST00000573166 LRBAP50851 2863 aa7.44□□□□□ -1.22
SMG6-213ENST00000573166 OR13C6PQ8NH95 151 aa7.44□□□□□ -1.22
SMG6-213ENST00000573166 DNAJC30Q96LL9 226 aa7.44□□□□□ -1.22
SMG6-213ENST00000573166 C11orf68Q9H3H3 251 aaKnown RBP7.44□□□□□ -1.22
SMG6-213ENST00000573166 KLK5Q9Y337 293 aaPredicted RBP7.44□□□□□ -1.22
SMG6-213ENST00000573166 IGLC6P0CF74 106 aa7.43□□□□□ -1.22
SMG6-213ENST00000573166 CLPSL2Q6UWE3 100 aa7.43□□□□□ -1.22
SMG6-213ENST00000573166 IL17DQ8TAD2 202 aa7.43□□□□□ -1.22
SMG6-213ENST00000573166 CST9LQ9H4G1 147 aa7.43□□□□□ -1.22
SMG6-213ENST00000573166 CR1P17927 2039 aa7.43□□□□□ -1.22
SMG6-213ENST00000573166 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.43□□□□□ -1.22
SMG6-213ENST00000573166 TRAV26-1A0A087WT03 109 aa7.43□□□□□ -1.22
SMG6-213ENST00000573166 IGKV2-29A2NJV5 120 aaPredicted RBP7.43□□□□□ -1.22
SMG6-213ENST00000573166 C11orf21Q9P2W6 132 aa7.43□□□□□ -1.22
SMG6-213ENST00000573166 DEFB131BA0A096LNP1 70 aa7.43□□□□□ -1.22
SMG6-213ENST00000573166 K7EMI3 77 aa7.43□□□□□ -1.22
SMG6-213ENST00000573166 A0A0U1RRA0 63 aa7.42□□□□□ -1.22
SMG6-213ENST00000573166 SOCS3O14543 225 aa7.42□□□□□ -1.22
SMG6-213ENST00000573166 LGALS9BQ3B8N2 356 aa7.42□□□□□ -1.22
SMG6-213ENST00000573166 SPATA12Q7Z6I5 190 aa7.42□□□□□ -1.22
SMG6-213ENST00000573166 ERG28Q9UKR5 140 aa7.42□□□□□ -1.22
SMG6-213ENST00000573166 DAZ2Q13117 558 aaKnown RBP7.42□□□□□ -1.22
SMG6-213ENST00000573166 C6orf226Q5I0X4 101 aa7.42□□□□□ -1.22
SMG6-213ENST00000573166 DAZ4Q86SG3 579 aaKnown RBP7.42□□□□□ -1.22
SMG6-213ENST00000573166 CHAC1Q9BUX1 264 aa7.42□□□□□ -1.22
SMG6-213ENST00000573166 DAZ3Q9NR90 486 aaKnown RBP7.42□□□□□ -1.22
SMG6-213ENST00000573166 ESDP10768 282 aa7.42□□□□□ -1.22
SMG6-213ENST00000573166 RNASE13Q5GAN3 156 aaKnown RBP7.42□□□□□ -1.22
SMG6-213ENST00000573166 UBE2WQ96B02 151 aa7.42□□□□□ -1.22
SMG6-213ENST00000573166 Q9HAA7 133 aa7.42□□□□□ -1.22
SMG6-213ENST00000573166 LAMA5O15230 3695 aa7.41□□□□□ -1.22
SMG6-213ENST00000573166 TMEM238C9JI98 176 aa7.41□□□□□ -1.22
SMG6-213ENST00000573166 GAGE2BQ13066 116 aa7.41□□□□□ -1.22
SMG6-213ENST00000573166 GAGE2EQ4V326 116 aa7.41□□□□□ -1.22
SMG6-213ENST00000573166 TMEM141Q96I45 108 aa7.41□□□□□ -1.22
SMG6-213ENST00000573166 TTTY13Q9BZ97 58 aa7.41□□□□□ -1.22
SMG6-213ENST00000573166 GAGE2DQ9UEU5 116 aa7.41□□□□□ -1.22
SMG6-213ENST00000573166 APCP25054 2843 aa7.41□□□□□ -1.22
SMG6-213ENST00000573166 UBR5O95071 2799 aaPredicted RBP7.41□□□□□ -1.22
SMG6-213ENST00000573166 TRBV10-1A0A0K0K1A3 114 aa7.41□□□□□ -1.22
SMG6-213ENST00000573166 COX8AP10176 69 aa7.41□□□□□ -1.22
SMG6-213ENST00000573166 AMTNQ6UX39 209 aa7.41□□□□□ -1.22
SMG6-213ENST00000573166 Q8N976 141 aa7.41□□□□□ -1.22
SMG6-213ENST00000573166 RETNQ9HD89 108 aa7.41□□□□□ -1.22
SMG6-213ENST00000573166 P0DMU3 169 aa7.4□□□□□ -1.22
SMG6-213ENST00000573166 FAM231AP0DMU4 169 aa7.4□□□□□ -1.22
SMG6-213ENST00000573166 FAM231CP0DMU5 169 aa7.4□□□□□ -1.22
SMG6-213ENST00000573166 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.4□□□□□ -1.22
SMG6-213ENST00000573166 PMVKQ15126 192 aa7.4□□□□□ -1.22
SMG6-213ENST00000573166 LGALS9CQ6DKI2 356 aa7.4□□□□□ -1.22
SMG6-213ENST00000573166 GATD1Q8NB37 220 aa7.4□□□□□ -1.22
SMG6-213ENST00000573166 RNASE3P12724 160 aaKnown RBP7.4□□□□□ -1.23
SMG6-213ENST00000573166 RASL10AQ92737 203 aa7.4□□□□□ -1.23
SMG6-213ENST00000573166 IGHV3-30P01768 117 aa7.39□□□□□ -1.23
SMG6-213ENST00000573166 IGHV3-33P01772 117 aa7.39□□□□□ -1.23
SMG6-213ENST00000573166 IGHV3-30-3P0DP02 117 aa7.39□□□□□ -1.23
SMG6-213ENST00000573166 IGHV3-30-5P0DP03 117 aa7.39□□□□□ -1.23
SMG6-213ENST00000573166 ZFAND6Q6FIF0 208 aa7.39□□□□□ -1.23
SMG6-213ENST00000573166 ANKRD39Q53RE8 183 aa7.39□□□□□ -1.23
SMG6-213ENST00000573166 PLEKHB2Q96CS7 222 aa7.39□□□□□ -1.23
SMG6-213ENST00000573166 PGPEP1Q9NXJ5 209 aa7.39□□□□□ -1.23
SMG6-213ENST00000573166 IGKV2D-24A0A075B6R9 120 aa7.39□□□□□ -1.23
SMG6-213ENST00000573166 C9orf118A6NHY6 69 aa7.39□□□□□ -1.23
SMG6-213ENST00000573166 BVES-AS1Q5T3Y7 98 aa7.39□□□□□ -1.23
SMG6-213ENST00000573166 RMI2Q96E14 147 aa7.39□□□□□ -1.23
SMG6-213ENST00000573166 PRSS47A8MTI9 375 aa7.38□□□□□ -1.23
SMG6-213ENST00000573166 BEAN1Q3B7T3 259 aa7.38□□□□□ -1.23
SMG6-213ENST00000573166 VSIG2Q96IQ7 327 aa7.38□□□□□ -1.23
SMG6-213ENST00000573166 KLK9Q2XQG4 91 aa7.38□□□□□ -1.23
SMG6-213ENST00000573166 CFAP126Q5VTH2 177 aa7.38□□□□□ -1.23
SMG6-213ENST00000573166 ZFP2Q6ZN57 461 aa7.38□□□□□ -1.23
SMG6-213ENST00000573166 C1orf158Q8N1D5 194 aa7.38□□□□□ -1.23
SMG6-213ENST00000573166 A0A0J9YWU9 116 aa7.38□□□□□ -1.23
SMG6-213ENST00000573166 A0A1B0GXF2 115 aa7.38□□□□□ -1.23
SMG6-213ENST00000573166 ZNF561-AS1K7EIQ3 104 aa7.38□□□□□ -1.23
SMG6-213ENST00000573166 LINC00158P58513 81 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms