RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 C15orf53Q8NAA6 179 aa2.6□□□□□ -1.99
SMG6-208ENST00000570874 VGLL1Q99990 258 aa2.6□□□□□ -1.99
SMG6-208ENST00000570874 PMCHL2Q9BQD1 86 aa2.6□□□□□ -1.99
SMG6-208ENST00000570874 ZNF492Q9P255 531 aa2.6□□□□□ -1.99
SMG6-208ENST00000570874 COL12A1Q99715 3063 aa2.6□□□□□ -1.99
SMG6-208ENST00000570874 SPG11Q96JI7 2443 aa2.6□□□□□ -1.99
SMG6-208ENST00000570874 VPS13CQ709C8 3753 aa2.6□□□□□ -1.99
SMG6-208ENST00000570874 USP9XQ93008 2570 aaPredicted RBP2.59□□□□□ -1.99
SMG6-208ENST00000570874 FBN2P35556 2912 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 KMT2BQ9UMN6 2715 aaPredicted RBP2.59□□□□□ -1.99
SMG6-208ENST00000570874 SPTAN1Q13813 2472 aaKnown RBP2.59□□□□□ -1.99
SMG6-208ENST00000570874 DOPEY1Q5JWR5 2465 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 A0A1W2PPM0 123 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 SMIM27A0A1W2PRY6 76 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 K7EQG2 157 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 ZNF324O75467 553 aaPredicted RBP2.59□□□□□ -1.99
SMG6-208ENST00000570874 IGHV1-69P01742 117 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 HBDP02042 147 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 PRM2P04554 102 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 CD7P09564 240 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 ARL14EPLP0DKL9 152 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 INAFM2P0DMQ5 153 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 GCHFRP30047 84 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 HERVK_113P61574 105 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 ERHP84090 104 aaKnown RBP2.59□□□□□ -1.99
SMG6-208ENST00000570874 FXYD3Q14802 87 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 LY6EQ16553 131 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 ORMDL2Q53FV1 153 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 MINOS1Q5TGZ0 78 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 MIR17HGQ75NE6 70 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 TMEM61Q8N0U2 210 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 NPBQ8NG41 125 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 PPDPFLQ8WWR9 84 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 CHCHD1Q96BP2 118 aaKnown RBP2.59□□□□□ -1.99
SMG6-208ENST00000570874 RMI2Q96E14 147 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 VSIG2Q96IQ7 327 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 ZNF414Q96IQ9 312 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 C20orf78Q9BR46 151 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 CHAC1Q9BUX1 264 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 GFRA4Q9GZZ7 299 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 TP73-AS1Q9UF72 201 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 MINOS1-NBL1R4GNA1 71 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 V9GYV3 84 aa2.59□□□□□ -1.99
SMG6-208ENST00000570874 CSMD2Q7Z408 3487 aa2.59□□□□□ -2
SMG6-208ENST00000570874 TACC2O95359 2948 aa2.58□□□□□ -2
SMG6-208ENST00000570874 UTP20O75691 2785 aaKnown RBP2.58□□□□□ -2
SMG6-208ENST00000570874 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.58□□□□□ -2
SMG6-208ENST00000570874 GRIFINA4D1Z8 144 aa2.58□□□□□ -2
SMG6-208ENST00000570874 RBAKDNA6NC62 111 aa2.58□□□□□ -2
SMG6-208ENST00000570874 A8MWL6 223 aa2.58□□□□□ -2
SMG6-208ENST00000570874 INAFM1C9JVW0 142 aa2.58□□□□□ -2
SMG6-208ENST00000570874 G3V318 75 aa2.58□□□□□ -2
SMG6-208ENST00000570874 H3BUX3 64 aa2.58□□□□□ -2
SMG6-208ENST00000570874 I3L2K1 104 aa2.58□□□□□ -2
SMG6-208ENST00000570874 J3QKU1 62 aa2.58□□□□□ -2
SMG6-208ENST00000570874 K7EIM0 57 aa2.58□□□□□ -2
SMG6-208ENST00000570874 SERF1AO75920 110 aa2.58□□□□□ -2
SMG6-208ENST00000570874 APCSP02743 223 aa2.58□□□□□ -2
SMG6-208ENST00000570874 MSMBP08118 114 aa2.58□□□□□ -2
SMG6-208ENST00000570874 ZNF688P0C7X2 276 aa2.58□□□□□ -2
SMG6-208ENST00000570874 CBLN1P23435 193 aa2.58□□□□□ -2
SMG6-208ENST00000570874 NPPCP23582 126 aa2.58□□□□□ -2
SMG6-208ENST00000570874 ATP5EP56381 51 aaPredicted RBP2.58□□□□□ -2
SMG6-208ENST00000570874 REG3AQ06141 175 aa2.58□□□□□ -2
SMG6-208ENST00000570874 DEFB113Q30KQ7 82 aa2.58□□□□□ -2
SMG6-208ENST00000570874 ZNF876PQ49A33 203 aa2.58□□□□□ -2
SMG6-208ENST00000570874 LINC01554Q52M75 96 aa2.58□□□□□ -2
SMG6-208ENST00000570874 PATE2Q6UY27 113 aa2.58□□□□□ -2
SMG6-208ENST00000570874 OPRPNQ99935 248 aaPredicted RBP2.58□□□□□ -2
SMG6-208ENST00000570874 DPH3P1Q9H4G8 78 aa2.58□□□□□ -2
SMG6-208ENST00000570874 TNFRSF19Q9NS68 423 aa2.58□□□□□ -2
SMG6-208ENST00000570874 EPDR1Q9UM22 224 aa2.58□□□□□ -2
SMG6-208ENST00000570874 LINC00588Q9Y4M8 146 aa2.58□□□□□ -2
SMG6-208ENST00000570874 F11RQ9Y624 299 aaKnown RBP2.58□□□□□ -2
SMG6-208ENST00000570874 EPG5Q9HCE0 2579 aa2.57□□□□□ -2
SMG6-208ENST00000570874 ZNF469Q96JG9 3925 aaPredicted RBP2.57□□□□□ -2
SMG6-208ENST00000570874 ZFYVE26Q68DK2 2539 aa2.57□□□□□ -2
SMG6-208ENST00000570874 ZNF462Q96JM2 2506 aa2.57□□□□□ -2
SMG6-208ENST00000570874 IGLV11-55A0A075B6I3 123 aa2.57□□□□□ -2
SMG6-208ENST00000570874 IGHV3OR16-8A0A075B7F1 116 aa2.57□□□□□ -2
SMG6-208ENST00000570874 IGHV3-35A0A0C4DH35 117 aa2.57□□□□□ -2
SMG6-208ENST00000570874 TRBV6-1A0A0K0K1D8 114 aa2.57□□□□□ -2
SMG6-208ENST00000570874 TRBV7-7A0A0K0K1E9 115 aa2.57□□□□□ -2
SMG6-208ENST00000570874 A0A1W2PS18 150 aa2.57□□□□□ -2
SMG6-208ENST00000570874 TCRBV4S1A1TA0A5B7 111 aa2.57□□□□□ -2
SMG6-208ENST00000570874 PEX7O00628 323 aa2.57□□□□□ -2
SMG6-208ENST00000570874 SLC25A16P16260 332 aa2.57□□□□□ -2
SMG6-208ENST00000570874 DEFB112Q30KQ8 113 aa2.57□□□□□ -2
SMG6-208ENST00000570874 C10orf99Q6UWK7 81 aa2.57□□□□□ -2
SMG6-208ENST00000570874 TMEM136Q6ZRR5 245 aa2.57□□□□□ -2
SMG6-208ENST00000570874 Q6ZSN1 163 aa2.57□□□□□ -2
SMG6-208ENST00000570874 C7orf65Q6ZTY9 151 aa2.57□□□□□ -2
SMG6-208ENST00000570874 SPATA12Q7Z6I5 190 aa2.57□□□□□ -2
SMG6-208ENST00000570874 SBSPONQ8IVN8 264 aa2.57□□□□□ -2
SMG6-208ENST00000570874 AMN1Q8IY45 258 aa2.57□□□□□ -2
SMG6-208ENST00000570874 TMEM256Q8N2U0 113 aa2.57□□□□□ -2
SMG6-208ENST00000570874 C5orf56Q8N8D9 126 aa2.57□□□□□ -2
SMG6-208ENST00000570874 SLC25A29Q8N8R3 303 aa2.57□□□□□ -2
SMG6-208ENST00000570874 TSKUQ8WUA8 353 aa2.57□□□□□ -2
SMG6-208ENST00000570874 FAM167A-AS1Q96KT0 104 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms