RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 TWIST1Q15672 202 aa4.19□□□□□ -1.74
SMG6-204ENST00000570606 PRR27Q6MZM9 219 aa4.19□□□□□ -1.74
SMG6-204ENST00000570606 AP1S3Q96PC3 154 aa4.19□□□□□ -1.74
SMG6-204ENST00000570606 PAM16Q9Y3D7 125 aa4.19□□□□□ -1.74
SMG6-204ENST00000570606 ARPC5O15511 151 aa4.18□□□□□ -1.74
SMG6-204ENST00000570606 S100A9P06702 114 aaKnown RBP4.18□□□□□ -1.74
SMG6-204ENST00000570606 PRSS1P07477 247 aa4.18□□□□□ -1.74
SMG6-204ENST00000570606 MGPP08493 103 aa4.18□□□□□ -1.74
SMG6-204ENST00000570606 AMTP48728 403 aa4.18□□□□□ -1.74
SMG6-204ENST00000570606 HNRNPA3P51991 378 aaKnown RBP4.18□□□□□ -1.74
SMG6-204ENST00000570606 RBX1P62877 108 aa4.18□□□□□ -1.74
SMG6-204ENST00000570606 PAPPA-AS1Q5QFB9 102 aa4.18□□□□□ -1.74
SMG6-204ENST00000570606 LINC00269Q8N2A0 174 aa4.18□□□□□ -1.74
SMG6-204ENST00000570606 PRR26Q8N8Z3 221 aa4.18□□□□□ -1.74
SMG6-204ENST00000570606 DERL1Q9BUN8 251 aa4.18□□□□□ -1.74
SMG6-204ENST00000570606 TPPP3Q9BW30 176 aa4.18□□□□□ -1.74
SMG6-204ENST00000570606 IGLV10-54A0A075B6I4 117 aa4.17□□□□□ -1.74
SMG6-204ENST00000570606 IGHV1-24A0A0C4DH33 117 aa4.17□□□□□ -1.74
SMG6-204ENST00000570606 A0A0D9SG52 128 aa4.17□□□□□ -1.74
SMG6-204ENST00000570606 hDV102S1A0JD36 115 aa4.17□□□□□ -1.74
SMG6-204ENST00000570606 SNAI2O43623 268 aa4.17□□□□□ -1.74
SMG6-204ENST00000570606 OR5AL1P0C617 328 aa4.17□□□□□ -1.74
SMG6-204ENST00000570606 BAGE2Q86Y30 109 aa4.17□□□□□ -1.74
SMG6-204ENST00000570606 C9orf163Q8N9P6 203 aa4.17□□□□□ -1.74
SMG6-204ENST00000570606 FAM213BQ8TBF2 198 aa4.17□□□□□ -1.74
SMG6-204ENST00000570606 VAX2Q9UIW0 290 aa4.17□□□□□ -1.74
SMG6-204ENST00000570606 IGHV3-64A0A075B6Q5 118 aa4.16□□□□□ -1.74
SMG6-204ENST00000570606 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.16□□□□□ -1.74
SMG6-204ENST00000570606 H7C1H1 209 aa4.16□□□□□ -1.74
SMG6-204ENST00000570606 PANO1I0J062 215 aa4.16□□□□□ -1.74
SMG6-204ENST00000570606 REG3AQ06141 175 aa4.16□□□□□ -1.74
SMG6-204ENST00000570606 IQCJQ1A5X6 159 aa4.16□□□□□ -1.74
SMG6-204ENST00000570606 WDR73Q6P4I2 378 aa4.16□□□□□ -1.74
SMG6-204ENST00000570606 NTM-AS1Q6ZSK4 140 aa4.16□□□□□ -1.74
SMG6-204ENST00000570606 SFT2D1Q8WV19 159 aa4.16□□□□□ -1.74
SMG6-204ENST00000570606 CYTL1Q9NRR1 136 aa4.16□□□□□ -1.74
SMG6-204ENST00000570606 PRR34Q9NV39 138 aa4.16□□□□□ -1.74
SMG6-204ENST00000570606 UBE2L6O14933 153 aa4.15□□□□□ -1.75
SMG6-204ENST00000570606 RPL35P42766 123 aaKnown RBP4.15□□□□□ -1.75
SMG6-204ENST00000570606 SEC61BP60468 96 aaKnown RBP4.15□□□□□ -1.75
SMG6-204ENST00000570606 CNBPP62633 177 aaKnown RBP4.15□□□□□ -1.75
SMG6-204ENST00000570606 KCNRGQ8N5I3 272 aa4.15□□□□□ -1.75
SMG6-204ENST00000570606 DPH3Q96FX2 82 aa4.15□□□□□ -1.75
SMG6-204ENST00000570606 TMEM243Q9BU79 118 aa4.15□□□□□ -1.75
SMG6-204ENST00000570606 TNXBP22105 4242 aa4.15□□□□□ -1.75
SMG6-204ENST00000570606 TRAV8-4A0A0B4J246 113 aa4.14□□□□□ -1.75
SMG6-204ENST00000570606 UMAD1C9J7I0 102 aa4.14□□□□□ -1.75
SMG6-204ENST00000570606 G3V3Q6 166 aa4.14□□□□□ -1.75
SMG6-204ENST00000570606 SMLR1H3BR10 107 aa4.14□□□□□ -1.75
SMG6-204ENST00000570606 P01737 135 aa4.14□□□□□ -1.75
SMG6-204ENST00000570606 CHTF8P0CG12 524 aa4.14□□□□□ -1.75
SMG6-204ENST00000570606 GZMBP10144 247 aa4.14□□□□□ -1.75
SMG6-204ENST00000570606 SULT1A2P50226 295 aa4.14□□□□□ -1.75
SMG6-204ENST00000570606 RAB5CP51148 216 aa4.14□□□□□ -1.75
SMG6-204ENST00000570606 NKX2-5P52952 324 aaPredicted RBP4.14□□□□□ -1.75
SMG6-204ENST00000570606 RPS20P60866 119 aaKnown RBP4.14□□□□□ -1.75
SMG6-204ENST00000570606 CENPWQ5EE01 88 aa4.14□□□□□ -1.75
SMG6-204ENST00000570606 KRTAP26-1Q6PEX3 210 aa4.14□□□□□ -1.75
SMG6-204ENST00000570606 SDIM1Q6ZPB5 146 aa4.14□□□□□ -1.75
SMG6-204ENST00000570606 Q6ZRU5 148 aa4.14□□□□□ -1.75
SMG6-204ENST00000570606 FER1L6-AS1Q8NA97 138 aa4.14□□□□□ -1.75
SMG6-204ENST00000570606 C20orf203Q8NBC4 194 aa4.14□□□□□ -1.75
SMG6-204ENST00000570606 OR2D3Q8NGH3 330 aa4.14□□□□□ -1.75
SMG6-204ENST00000570606 C7orf33Q8WU49 177 aa4.14□□□□□ -1.75
SMG6-204ENST00000570606 DPH3P1Q9H4G8 78 aa4.14□□□□□ -1.75
SMG6-204ENST00000570606 KIF25-AS1Q9Y6Z4 181 aa4.14□□□□□ -1.75
SMG6-204ENST00000570606 IGLV4-60A0A075B6I1 120 aa4.13□□□□□ -1.75
SMG6-204ENST00000570606 IGKV3OR2-268A0A0C4DH90 116 aa4.13□□□□□ -1.75
SMG6-204ENST00000570606 KANTRA0A1W2PQU2 76 aa4.13□□□□□ -1.75
SMG6-204ENST00000570606 XKRY2A2RUG3 117 aa4.13□□□□□ -1.75
SMG6-204ENST00000570606 M0QY20 66 aa4.13□□□□□ -1.75
SMG6-204ENST00000570606 TRGC1P0CF51 173 aa4.13□□□□□ -1.75
SMG6-204ENST00000570606 MT1HL1P0DM35 61 aa4.13□□□□□ -1.75
SMG6-204ENST00000570606 CACNG7P62955 275 aa4.13□□□□□ -1.75
SMG6-204ENST00000570606 CIRBPQ14011 172 aaKnown RBP4.13□□□□□ -1.75
SMG6-204ENST00000570606 COTL1Q14019 142 aa4.13□□□□□ -1.75
SMG6-204ENST00000570606 ZNF345Q14585 488 aa4.13□□□□□ -1.75
SMG6-204ENST00000570606 RASL11AQ6T310 242 aa4.13□□□□□ -1.75
SMG6-204ENST00000570606 TMUB2Q71RG4 321 aa4.13□□□□□ -1.75
SMG6-204ENST00000570606 SPACA4Q8TDM5 124 aa4.13□□□□□ -1.75
SMG6-204ENST00000570606 MBD3L1Q8WWY6 194 aa4.13□□□□□ -1.75
SMG6-204ENST00000570606 RNF185Q96GF1 192 aa4.13□□□□□ -1.75
SMG6-204ENST00000570606 GFRA4Q9GZZ7 299 aa4.13□□□□□ -1.75
SMG6-204ENST00000570606 MANBALQ9NQG1 85 aa4.13□□□□□ -1.75
SMG6-204ENST00000570606 BATF3Q9NR55 127 aa4.13□□□□□ -1.75
SMG6-204ENST00000570606 GNG13Q9P2W3 67 aa4.13□□□□□ -1.75
SMG6-204ENST00000570606 A0A087WYN8 130 aa4.12□□□□□ -1.75
SMG6-204ENST00000570606 IGKV2-24A0A0C4DH68 120 aa4.12□□□□□ -1.75
SMG6-204ENST00000570606 A0A1B0GUV1 79 aa4.12□□□□□ -1.75
SMG6-204ENST00000570606 BCL2L11O43521 198 aa4.12□□□□□ -1.75
SMG6-204ENST00000570606 IFNA1P01562 189 aa4.12□□□□□ -1.75
SMG6-204ENST00000570606 IGLC6P0CF74 106 aa4.12□□□□□ -1.75
SMG6-204ENST00000570606 VPREB1P12018 145 aa4.12□□□□□ -1.75
SMG6-204ENST00000570606 GNG4P50150 75 aa4.12□□□□□ -1.75
SMG6-204ENST00000570606 EIF5AP63241 154 aaKnown RBP4.12□□□□□ -1.75
SMG6-204ENST00000570606 RGS21Q2M5E4 152 aa4.12□□□□□ -1.75
SMG6-204ENST00000570606 C11orf52Q96A22 123 aa4.12□□□□□ -1.75
SMG6-204ENST00000570606 PGLYRP4Q96LB8 373 aa4.12□□□□□ -1.75
SMG6-204ENST00000570606 F2Z2F3 143 aa4.11□□□□□ -1.75
SMG6-204ENST00000570606 TEX46H3BTG2 121 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms