RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 ITPR1Q14643 2758 aa5.66□□□□□ -1.5
LINC00559-201ENST00000569476 ZZEF1O43149 2961 aa5.66□□□□□ -1.5
LINC00559-201ENST00000569476 CELSR3Q9NYQ7 3312 aa5.66□□□□□ -1.5
LINC00559-201ENST00000569476 IGLV5-39A0A0G2JS06 123 aa5.66□□□□□ -1.5
LINC00559-201ENST00000569476 PRO1854Q9UHT4 67 aa5.66□□□□□ -1.5
LINC00559-201ENST00000569476 CFAP47Q6ZTR5 3102 aa5.66□□□□□ -1.5
LINC00559-201ENST00000569476 ACACBO00763 2458 aa5.65□□□□□ -1.5
LINC00559-201ENST00000569476 SCGB1A1P11684 91 aa5.65□□□□□ -1.5
LINC00559-201ENST00000569476 TSPEAR-AS2P59090 65 aa5.65□□□□□ -1.5
LINC00559-201ENST00000569476 GAGE13Q4V321 117 aa5.65□□□□□ -1.5
LINC00559-201ENST00000569476 CSNK1G2-AS1Q8NCQ2 148 aa5.65□□□□□ -1.5
LINC00559-201ENST00000569476 MRPL16Q9NX20 251 aaKnown RBP5.65□□□□□ -1.5
LINC00559-201ENST00000569476 TRAV26-1A0A087WT03 109 aa5.65□□□□□ -1.51
LINC00559-201ENST00000569476 A0A0J9YXV3 536 aa5.65□□□□□ -1.51
LINC00559-201ENST00000569476 IGHV3-30-3P0DP02 117 aa5.65□□□□□ -1.51
LINC00559-201ENST00000569476 TSPAN13O95857 204 aa5.65□□□□□ -1.51
LINC00559-201ENST00000569476 TCTAP57738 103 aa5.65□□□□□ -1.51
LINC00559-201ENST00000569476 MIAQ16674 131 aa5.65□□□□□ -1.51
LINC00559-201ENST00000569476 TMEM101Q96IK0 257 aa5.65□□□□□ -1.51
LINC00559-201ENST00000569476 GEMIN7Q9H840 131 aaKnown RBP5.65□□□□□ -1.51
LINC00559-201ENST00000569476 PGPEP1Q9NXJ5 209 aa5.65□□□□□ -1.51
LINC00559-201ENST00000569476 ATRXP46100 2492 aa5.65□□□□□ -1.51
LINC00559-201ENST00000569476 UBR5O95071 2799 aaPredicted RBP5.64□□□□□ -1.51
LINC00559-201ENST00000569476 C9orf66Q5T8R8 295 aa5.64□□□□□ -1.51
LINC00559-201ENST00000569476 PRO0461Q9UI25 63 aa5.64□□□□□ -1.51
LINC00559-201ENST00000569476 K7ERJ3 54 aa5.64□□□□□ -1.51
LINC00559-201ENST00000569476 CIRBPQ14011 172 aaKnown RBP5.64□□□□□ -1.51
LINC00559-201ENST00000569476 Q6ZSN1 163 aa5.64□□□□□ -1.51
LINC00559-201ENST00000569476 LINC00482Q8N8I6 264 aa5.64□□□□□ -1.51
LINC00559-201ENST00000569476 TRGV1A0A0A0MS02 117 aa5.64□□□□□ -1.51
LINC00559-201ENST00000569476 TRBV30A0A0K0K1B3 111 aa5.64□□□□□ -1.51
LINC00559-201ENST00000569476 TMEM243Q9BU79 118 aa5.64□□□□□ -1.51
LINC00559-201ENST00000569476 XCL2Q9UBD3 114 aa5.64□□□□□ -1.51
LINC00559-201ENST00000569476 GIG44P09565 113 aaPredicted RBP5.63□□□□□ -1.51
LINC00559-201ENST00000569476 DGAT2L7PQ6IED9 249 aa5.63□□□□□ -1.51
LINC00559-201ENST00000569476 LITAFQ99732 161 aa5.63□□□□□ -1.51
LINC00559-201ENST00000569476 SPTBN2O15020 2390 aa5.63□□□□□ -1.51
LINC00559-201ENST00000569476 PLAC8L1A1L4L8 177 aa5.63□□□□□ -1.51
LINC00559-201ENST00000569476 CFC1BP0CG36 223 aa5.63□□□□□ -1.51
LINC00559-201ENST00000569476 CFC1P0CG37 223 aa5.63□□□□□ -1.51
LINC00559-201ENST00000569476 NDUFA12Q9UI09 145 aa5.63□□□□□ -1.51
LINC00559-201ENST00000569476 BOD1L1Q8NFC6 3051 aa5.63□□□□□ -1.51
LINC00559-201ENST00000569476 LYRM9A8MSI8 78 aa5.62□□□□□ -1.51
LINC00559-201ENST00000569476 Q6ZUT4 128 aa5.62□□□□□ -1.51
LINC00559-201ENST00000569476 ERG28Q9UKR5 140 aa5.62□□□□□ -1.51
LINC00559-201ENST00000569476 SELENOKQ9Y6D0 94 aa5.62□□□□□ -1.51
LINC00559-201ENST00000569476 WIPF1O43516 503 aa5.62□□□□□ -1.51
LINC00559-201ENST00000569476 IGHV3-33P01772 117 aa5.62□□□□□ -1.51
LINC00559-201ENST00000569476 SPTBN1Q01082 2364 aaKnown RBP5.62□□□□□ -1.51
LINC00559-201ENST00000569476 NBEAQ8NFP9 2946 aa5.61□□□□□ -1.51
LINC00559-201ENST00000569476 TEX48A0A1B0GUV7 120 aa5.61□□□□□ -1.51
LINC00559-201ENST00000569476 CDC42SE2Q9NRR3 84 aa5.61□□□□□ -1.51
LINC00559-201ENST00000569476 UBE2L6O14933 153 aa5.61□□□□□ -1.51
LINC00559-201ENST00000569476 PF4P02776 101 aa5.61□□□□□ -1.51
LINC00559-201ENST00000569476 ATXN8Q156A1 80 aa5.61□□□□□ -1.51
LINC00559-201ENST00000569476 ADGRG4Q8IZF6 3080 aa5.6□□□□□ -1.51
LINC00559-201ENST00000569476 IGHV3-73A0A0B4J1V6 119 aa5.6□□□□□ -1.51
LINC00559-201ENST00000569476 FAM222AQ5U5X8 452 aa5.6□□□□□ -1.51
LINC00559-201ENST00000569476 SH2D6Q7Z4S9 175 aa5.6□□□□□ -1.51
LINC00559-201ENST00000569476 MUSTN1Q8IVN3 82 aa5.6□□□□□ -1.51
LINC00559-201ENST00000569476 OPRPNQ99935 248 aaPredicted RBP5.6□□□□□ -1.51
LINC00559-201ENST00000569476 SPATA25Q9BR10 227 aa5.6□□□□□ -1.51
LINC00559-201ENST00000569476 VPS25Q9BRG1 176 aa5.6□□□□□ -1.51
LINC00559-201ENST00000569476 DCHS2Q6V1P9 2916 aa5.6□□□□□ -1.51
LINC00559-201ENST00000569476 AKAP6Q13023 2319 aa5.6□□□□□ -1.51
LINC00559-201ENST00000569476 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.6□□□□□ -1.51
LINC00559-201ENST00000569476 IGHV3OR16-12A0A075B7B8 117 aa5.6□□□□□ -1.51
LINC00559-201ENST00000569476 A0A1W2PRX2 142 aa5.6□□□□□ -1.51
LINC00559-201ENST00000569476 IGKV2-29A2NJV5 120 aaPredicted RBP5.6□□□□□ -1.51
LINC00559-201ENST00000569476 A4D1N5 150 aa5.6□□□□□ -1.51
LINC00559-201ENST00000569476 HTN1P15515 57 aa5.6□□□□□ -1.51
LINC00559-201ENST00000569476 Q6ZTI0 123 aa5.6□□□□□ -1.51
LINC00559-201ENST00000569476 MUC7Q8TAX7 377 aa5.6□□□□□ -1.51
LINC00559-201ENST00000569476 NCOR2Q9Y618 2525 aa5.59□□□□□ -1.51
LINC00559-201ENST00000569476 COX6CP09669 75 aa5.59□□□□□ -1.51
LINC00559-201ENST00000569476 APOC4P55056 127 aa5.59□□□□□ -1.51
LINC00559-201ENST00000569476 LINC00242Q5T6M2 205 aa5.59□□□□□ -1.51
LINC00559-201ENST00000569476 PPDPFLQ8WWR9 84 aa5.59□□□□□ -1.51
LINC00559-201ENST00000569476 A0A1B0GUV1 79 aa5.59□□□□□ -1.51
LINC00559-201ENST00000569476 EMP1P54849 157 aa5.59□□□□□ -1.51
LINC00559-201ENST00000569476 FHL2Q14192 279 aa5.59□□□□□ -1.51
LINC00559-201ENST00000569476 NOP10Q9NPE3 64 aaKnown RBP5.59□□□□□ -1.51
LINC00559-201ENST00000569476 NACAE9PAV3 2078 aa5.59□□□□□ -1.51
LINC00559-201ENST00000569476 C11orf44Q8N8P7 122 aa5.58□□□□□ -1.52
LINC00559-201ENST00000569476 IGSF10Q6WRI0 2623 aa5.58□□□□□ -1.52
LINC00559-201ENST00000569476 LAMA5O15230 3695 aa5.58□□□□□ -1.52
LINC00559-201ENST00000569476 TRGV2A0A075B6R0 118 aa5.58□□□□□ -1.52
LINC00559-201ENST00000569476 F5H768 121 aa5.58□□□□□ -1.52
LINC00559-201ENST00000569476 TEN1Q86WV5 123 aa5.58□□□□□ -1.52
LINC00559-201ENST00000569476 CARD19Q96LW7 228 aa5.58□□□□□ -1.52
LINC00559-201ENST00000569476 SPTBN4Q9H254 2564 aa5.58□□□□□ -1.52
LINC00559-201ENST00000569476 TRGV4A0A0C4DH28 118 aa5.58□□□□□ -1.52
LINC00559-201ENST00000569476 SMIM1B2RUZ4 78 aa5.58□□□□□ -1.52
LINC00559-201ENST00000569476 H3BT86 120 aa5.58□□□□□ -1.52
LINC00559-201ENST00000569476 NTM-AS1Q6ZSK4 140 aa5.58□□□□□ -1.52
LINC00559-201ENST00000569476 ZNF625Q96I27 306 aaPredicted RBP5.58□□□□□ -1.52
LINC00559-201ENST00000569476 LRBAP50851 2863 aa5.58□□□□□ -1.52
LINC00559-201ENST00000569476 TRBV6-8A0A0A6YYG3 113 aa5.57□□□□□ -1.52
LINC00559-201ENST00000569476 TMEM262E9PQX1 116 aa5.57□□□□□ -1.52
LINC00559-201ENST00000569476 APOMO95445 188 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms