RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 WFDC2Q14508 124 aa6.02□□□□□ -1.45
GTF3C1-210ENST00000569394 MRPL54Q6P161 138 aaKnown RBP6.02□□□□□ -1.45
GTF3C1-210ENST00000569394 WDR73Q6P4I2 378 aa6.02□□□□□ -1.45
GTF3C1-210ENST00000569394 AMN1Q8IY45 258 aa6.02□□□□□ -1.45
GTF3C1-210ENST00000569394 DNAH5Q8TE73 4624 aa6.02□□□□□ -1.45
GTF3C1-210ENST00000569394 IGLV10-54A0A075B6I4 117 aa6.01□□□□□ -1.45
GTF3C1-210ENST00000569394 TRAV8-3A0A0A6YYJ7 113 aa6.01□□□□□ -1.45
GTF3C1-210ENST00000569394 IGHV1-24A0A0C4DH33 117 aa6.01□□□□□ -1.45
GTF3C1-210ENST00000569394 UBE2L6O14933 153 aa6.01□□□□□ -1.45
GTF3C1-210ENST00000569394 BTF3P20290 206 aaKnown RBP6.01□□□□□ -1.45
GTF3C1-210ENST00000569394 HAMPP81172 84 aa6.01□□□□□ -1.45
GTF3C1-210ENST00000569394 RIGQ13278 110 aa6.01□□□□□ -1.45
GTF3C1-210ENST00000569394 CNFNQ9BYD5 112 aa6.01□□□□□ -1.45
GTF3C1-210ENST00000569394 NAT8BQ9UHF3 227 aa6.01□□□□□ -1.45
GTF3C1-210ENST00000569394 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6□□□□□ -1.45
GTF3C1-210ENST00000569394 IGKV2-29A2NJV5 120 aaPredicted RBP6□□□□□ -1.45
GTF3C1-210ENST00000569394 K7EP13 123 aa6□□□□□ -1.45
GTF3C1-210ENST00000569394 NDUFS6O75380 124 aaKnown RBP6□□□□□ -1.45
GTF3C1-210ENST00000569394 HLA-DQA1P01909 254 aa6□□□□□ -1.45
GTF3C1-210ENST00000569394 RAB4AP20338 218 aa6□□□□□ -1.45
GTF3C1-210ENST00000569394 PMCHP20382 165 aa6□□□□□ -1.45
GTF3C1-210ENST00000569394 RPS10P46783 165 aaKnown RBP6□□□□□ -1.45
GTF3C1-210ENST00000569394 AMTP48728 403 aa6□□□□□ -1.45
GTF3C1-210ENST00000569394 RBX1P62877 108 aa6□□□□□ -1.45
GTF3C1-210ENST00000569394 COTL1Q14019 142 aa6□□□□□ -1.45
GTF3C1-210ENST00000569394 LINC01620Q4KN68 170 aa6□□□□□ -1.45
GTF3C1-210ENST00000569394 ENHOQ6UWT2 76 aa6□□□□□ -1.45
GTF3C1-210ENST00000569394 LINC00269Q8N2A0 174 aa6□□□□□ -1.45
GTF3C1-210ENST00000569394 MAPKAPK5-AS1Q8N8E1 139 aa6□□□□□ -1.45
GTF3C1-210ENST00000569394 RNF185Q96GF1 192 aa6□□□□□ -1.45
GTF3C1-210ENST00000569394 TMEM243Q9BU79 118 aa6□□□□□ -1.45
GTF3C1-210ENST00000569394 TM2D2Q9BX73 214 aa6□□□□□ -1.45
GTF3C1-210ENST00000569394 GFRA4Q9GZZ7 299 aa6□□□□□ -1.45
GTF3C1-210ENST00000569394 RYR1P21817 5038 aa5.99□□□□□ -1.45
GTF3C1-210ENST00000569394 LRP1BQ9NZR2 4599 aa5.99□□□□□ -1.45
GTF3C1-210ENST00000569394 IGLV4-60A0A075B6I1 120 aa5.99□□□□□ -1.45
GTF3C1-210ENST00000569394 IGLV5-52A0A0A0MRZ9 124 aa5.99□□□□□ -1.45
GTF3C1-210ENST00000569394 LRCOL1A6NCL2 159 aa5.99□□□□□ -1.45
GTF3C1-210ENST00000569394 SDHAF1A6NFY7 115 aa5.99□□□□□ -1.45
GTF3C1-210ENST00000569394 ELOBQ15370 118 aa5.99□□□□□ -1.45
GTF3C1-210ENST00000569394 CLLU1Q5K131 121 aa5.99□□□□□ -1.45
GTF3C1-210ENST00000569394 RNASEKQ6P5S7 137 aaKnown RBP5.99□□□□□ -1.45
GTF3C1-210ENST00000569394 C1orf43Q9BWL3 253 aa5.99□□□□□ -1.45
GTF3C1-210ENST00000569394 TMEM191AQ9H0A3 160 aa5.99□□□□□ -1.45
GTF3C1-210ENST00000569394 SMDT1Q9H4I9 107 aa5.99□□□□□ -1.45
GTF3C1-210ENST00000569394 TMEM242Q9NWH2 141 aa5.99□□□□□ -1.45
GTF3C1-210ENST00000569394 SMIM27A0A1W2PRY6 76 aa5.98□□□□□ -1.45
GTF3C1-210ENST00000569394 APCSP02743 223 aa5.98□□□□□ -1.45
GTF3C1-210ENST00000569394 KRTAP10-1P60331 282 aa5.98□□□□□ -1.45
GTF3C1-210ENST00000569394 LAGE3Q14657 143 aa5.98□□□□□ -1.45
GTF3C1-210ENST00000569394 IQCJQ1A5X6 159 aa5.98□□□□□ -1.45
GTF3C1-210ENST00000569394 MRPL51Q4U2R6 128 aaKnown RBP5.98□□□□□ -1.45
GTF3C1-210ENST00000569394 TMEM97Q5BJF2 176 aa5.98□□□□□ -1.45
GTF3C1-210ENST00000569394 Q8N814 137 aa5.98□□□□□ -1.45
GTF3C1-210ENST00000569394 RMI2Q96E14 147 aa5.98□□□□□ -1.45
GTF3C1-210ENST00000569394 ST20Q9HBF5 79 aa5.98□□□□□ -1.45
GTF3C1-210ENST00000569394 FAM231BA6NCW3 169 aa5.97□□□□□ -1.45
GTF3C1-210ENST00000569394 F8W036 122 aa5.97□□□□□ -1.45
GTF3C1-210ENST00000569394 REG3AQ06141 175 aa5.97□□□□□ -1.45
GTF3C1-210ENST00000569394 Q0VG73 95 aa5.97□□□□□ -1.45
GTF3C1-210ENST00000569394 AMMECR1LQ6DCA0 310 aa5.97□□□□□ -1.45
GTF3C1-210ENST00000569394 COMMD7Q86VX2 200 aa5.97□□□□□ -1.45
GTF3C1-210ENST00000569394 I3L3M4 83 aa5.96□□□□□ -1.46
GTF3C1-210ENST00000569394 GCSHP23434 173 aa5.96□□□□□ -1.46
GTF3C1-210ENST00000569394 C20orf203Q8NBC4 194 aa5.96□□□□□ -1.46
GTF3C1-210ENST00000569394 TMEM70Q9BUB7 260 aa5.96□□□□□ -1.46
GTF3C1-210ENST00000569394 CHCHD7Q9BUK0 85 aa5.96□□□□□ -1.46
GTF3C1-210ENST00000569394 TSHBP01222 138 aa5.95□□□□□ -1.46
GTF3C1-210ENST00000569394 ADCYAP1P18509 176 aa5.95□□□□□ -1.46
GTF3C1-210ENST00000569394 FCER1GP30273 86 aa5.95□□□□□ -1.46
GTF3C1-210ENST00000569394 CKS2P33552 79 aa5.95□□□□□ -1.46
GTF3C1-210ENST00000569394 PKIAP61925 76 aa5.95□□□□□ -1.46
GTF3C1-210ENST00000569394 FAM104BQ5XKR9 115 aa5.95□□□□□ -1.46
GTF3C1-210ENST00000569394 MRAP2Q96G30 205 aa5.95□□□□□ -1.46
GTF3C1-210ENST00000569394 APOBP04114 4563 aaKnown RBP5.95□□□□□ -1.46
GTF3C1-210ENST00000569394 D6R8Y8 96 aa5.94□□□□□ -1.46
GTF3C1-210ENST00000569394 SMR3BP02814 79 aaPredicted RBP5.94□□□□□ -1.46
GTF3C1-210ENST00000569394 MT-ND4LP03901 98 aa5.94□□□□□ -1.46
GTF3C1-210ENST00000569394 FGF6P10767 208 aa5.94□□□□□ -1.46
GTF3C1-210ENST00000569394 HBBP68871 147 aa5.94□□□□□ -1.46
GTF3C1-210ENST00000569394 MIAQ16674 131 aa5.94□□□□□ -1.46
GTF3C1-210ENST00000569394 RNASE13Q5GAN3 156 aaKnown RBP5.94□□□□□ -1.46
GTF3C1-210ENST00000569394 NRACQ8N912 160 aa5.94□□□□□ -1.46
GTF3C1-210ENST00000569394 KRTAP4-5Q9BYR2 181 aa5.94□□□□□ -1.46
GTF3C1-210ENST00000569394 COX11Q9Y6N1 276 aa5.94□□□□□ -1.46
GTF3C1-210ENST00000569394 LOC389332A0A1B0GUA5 103 aa5.93□□□□□ -1.46
GTF3C1-210ENST00000569394 TMEM218A2RU14 115 aa5.93□□□□□ -1.46
GTF3C1-210ENST00000569394 USP17L23D6RBM5 183 aa5.93□□□□□ -1.46
GTF3C1-210ENST00000569394 PPP1R2P9O14990 202 aa5.93□□□□□ -1.46
GTF3C1-210ENST00000569394 PNRC1Q12796 327 aaPredicted RBP5.93□□□□□ -1.46
GTF3C1-210ENST00000569394 FRZBQ92765 325 aa5.93□□□□□ -1.46
GTF3C1-210ENST00000569394 BTF3L4Q96K17 158 aa5.93□□□□□ -1.46
GTF3C1-210ENST00000569394 HSPG2P98160 4391 aa5.92□□□□□ -1.46
GTF3C1-210ENST00000569394 TRBV6-5A0A0K0K1A5 114 aa5.92□□□□□ -1.46
GTF3C1-210ENST00000569394 GAGE12HA6NDE8 117 aa5.92□□□□□ -1.46
GTF3C1-210ENST00000569394 VCYO14598 125 aa5.92□□□□□ -1.46
GTF3C1-210ENST00000569394 TCAPO15273 167 aa5.92□□□□□ -1.46
GTF3C1-210ENST00000569394 TNFRSF6BO95407 300 aa5.92□□□□□ -1.46
GTF3C1-210ENST00000569394 NPYP01303 97 aa5.92□□□□□ -1.46
GTF3C1-210ENST00000569394 POLR2KP53803 58 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms