RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 CYP4F30PQ9H0H9 118 aa4.35□□□□□ -1.71
TUBGCP4-207ENST00000563963 TLN2Q9Y4G6 2542 aa4.35□□□□□ -1.71
TUBGCP4-207ENST00000563963 NACAE9PAV3 2078 aa4.35□□□□□ -1.71
TUBGCP4-207ENST00000563963 REG3AQ06141 175 aa4.35□□□□□ -1.71
TUBGCP4-207ENST00000563963 KRTAP27-1Q3LI81 207 aa4.35□□□□□ -1.71
TUBGCP4-207ENST00000563963 MIR17HGQ75NE6 70 aa4.35□□□□□ -1.71
TUBGCP4-207ENST00000563963 SCGB3A1Q96QR1 104 aa4.35□□□□□ -1.71
TUBGCP4-207ENST00000563963 ESPL1Q14674 2120 aa4.35□□□□□ -1.71
TUBGCP4-207ENST00000563963 CRIP3Q6Q6R5 217 aa4.35□□□□□ -1.71
TUBGCP4-207ENST00000563963 ADAMTS9Q9P2N4 1935 aa4.35□□□□□ -1.71
TUBGCP4-207ENST00000563963 SHANK1Q9Y566 2161 aa4.35□□□□□ -1.71
TUBGCP4-207ENST00000563963 MUC22E2RYF6 1773 aaPredicted RBP4.35□□□□□ -1.71
TUBGCP4-207ENST00000563963 IGHV5-10-1A0A0J9YXX1 117 aa4.35□□□□□ -1.71
TUBGCP4-207ENST00000563963 J3QL48 77 aa4.35□□□□□ -1.71
TUBGCP4-207ENST00000563963 IMMP1LQ96LU5 166 aa4.35□□□□□ -1.71
TUBGCP4-207ENST00000563963 ZFAND3Q9H8U3 227 aa4.35□□□□□ -1.71
TUBGCP4-207ENST00000563963 U3KQK5 164 aa4.35□□□□□ -1.71
TUBGCP4-207ENST00000563963 A6NED7 52 aa4.34□□□□□ -1.71
TUBGCP4-207ENST00000563963 KIAA0087Q14695 138 aa4.34□□□□□ -1.71
TUBGCP4-207ENST00000563963 C15orf32Q32M92 178 aa4.34□□□□□ -1.71
TUBGCP4-207ENST00000563963 SPINK9Q5DT21 86 aa4.34□□□□□ -1.71
TUBGCP4-207ENST00000563963 LIMD2Q9BT23 127 aa4.34□□□□□ -1.71
TUBGCP4-207ENST00000563963 CELA1Q9UNI1 258 aa4.34□□□□□ -1.71
TUBGCP4-207ENST00000563963 IGKV1-6A0A0C4DH72 117 aa4.34□□□□□ -1.72
TUBGCP4-207ENST00000563963 M0R1W7 72 aa4.34□□□□□ -1.72
TUBGCP4-207ENST00000563963 IGKV1-39P01597 117 aa4.34□□□□□ -1.72
TUBGCP4-207ENST00000563963 IGKV1D-39P04432 117 aa4.34□□□□□ -1.72
TUBGCP4-207ENST00000563963 ARMS2P0C7Q2 107 aa4.34□□□□□ -1.72
TUBGCP4-207ENST00000563963 PATE4P0C8F1 98 aa4.34□□□□□ -1.72
TUBGCP4-207ENST00000563963 PRR3P79522 188 aaKnown RBP4.34□□□□□ -1.72
TUBGCP4-207ENST00000563963 FBXL19-AS1Q494R0 122 aa4.34□□□□□ -1.72
TUBGCP4-207ENST00000563963 SEC16AO15027 2179 aa4.34□□□□□ -1.72
TUBGCP4-207ENST00000563963 TRAV22A0A0B4J277 110 aa4.33□□□□□ -1.72
TUBGCP4-207ENST00000563963 TRAV21A0A0B4J279 112 aa4.33□□□□□ -1.72
TUBGCP4-207ENST00000563963 LEPROTO15243 131 aa4.33□□□□□ -1.72
TUBGCP4-207ENST00000563963 IGHV3-9P01782 118 aa4.33□□□□□ -1.72
TUBGCP4-207ENST00000563963 SDHAF1A6NFY7 115 aa4.33□□□□□ -1.72
TUBGCP4-207ENST00000563963 A6NN06 94 aa4.33□□□□□ -1.72
TUBGCP4-207ENST00000563963 ZNF491Q8N8L2 437 aa4.33□□□□□ -1.72
TUBGCP4-207ENST00000563963 RETNLBQ9BQ08 111 aa4.33□□□□□ -1.72
TUBGCP4-207ENST00000563963 ZGRF1Q86YA3 2104 aa4.33□□□□□ -1.72
TUBGCP4-207ENST00000563963 A0A0C4DFX4 3053 aa4.33□□□□□ -1.72
TUBGCP4-207ENST00000563963 SONP18583 2426 aaKnown RBP4.33□□□□□ -1.72
TUBGCP4-207ENST00000563963 TFF1P04155 84 aa4.32□□□□□ -1.72
TUBGCP4-207ENST00000563963 IGHV4-31P0DP07 118 aa4.32□□□□□ -1.72
TUBGCP4-207ENST00000563963 COL5A1P20908 1838 aaPredicted RBP4.32□□□□□ -1.72
TUBGCP4-207ENST00000563963 PPP1R17O96001 155 aa4.32□□□□□ -1.72
TUBGCP4-207ENST00000563963 FAM229BQ4G0N7 80 aa4.32□□□□□ -1.72
TUBGCP4-207ENST00000563963 RNF185Q96GF1 192 aa4.32□□□□□ -1.72
TUBGCP4-207ENST00000563963 BSNQ9UPA5 3926 aa4.32□□□□□ -1.72
TUBGCP4-207ENST00000563963 PROP1O75360 226 aa4.32□□□□□ -1.72
TUBGCP4-207ENST00000563963 ERC2-IT1O76042 136 aa4.32□□□□□ -1.72
TUBGCP4-207ENST00000563963 CCL4P13236 92 aa4.32□□□□□ -1.72
TUBGCP4-207ENST00000563963 BBC3Q96PG8 261 aaPredicted RBP4.32□□□□□ -1.72
TUBGCP4-207ENST00000563963 INTS1Q8N201 2190 aaKnown RBP4.32□□□□□ -1.72
TUBGCP4-207ENST00000563963 NOTCH4Q99466 2003 aa4.32□□□□□ -1.72
TUBGCP4-207ENST00000563963 RP1P56715 2156 aa4.32□□□□□ -1.72
TUBGCP4-207ENST00000563963 TRGV8A0A0C4DH27 118 aa4.32□□□□□ -1.72
TUBGCP4-207ENST00000563963 RPL28P46779 137 aaKnown RBP4.32□□□□□ -1.72
TUBGCP4-207ENST00000563963 TNP2Q05952 138 aa4.32□□□□□ -1.72
TUBGCP4-207ENST00000563963 FBN3Q75N90 2809 aa4.31□□□□□ -1.72
TUBGCP4-207ENST00000563963 PMS2P5A8MQ11 134 aa4.31□□□□□ -1.72
TUBGCP4-207ENST00000563963 C2orf83Q53S99 150 aa4.31□□□□□ -1.72
TUBGCP4-207ENST00000563963 CASC2Q6XLA1 102 aa4.31□□□□□ -1.72
TUBGCP4-207ENST00000563963 IGLV3-12A0A075B6K2 115 aa4.31□□□□□ -1.72
TUBGCP4-207ENST00000563963 C17orf98A8MV24 154 aa4.31□□□□□ -1.72
TUBGCP4-207ENST00000563963 C9orf116Q5BN46 136 aaPredicted RBP4.31□□□□□ -1.72
TUBGCP4-207ENST00000563963 ENHOQ6UWT2 76 aa4.31□□□□□ -1.72
TUBGCP4-207ENST00000563963 Q6ZS52 159 aa4.31□□□□□ -1.72
TUBGCP4-207ENST00000563963 TMEM254Q8TBM7 123 aa4.31□□□□□ -1.72
TUBGCP4-207ENST00000563963 PIEZO2Q9H5I5 2752 aa4.31□□□□□ -1.72
TUBGCP4-207ENST00000563963 IGHV3OR16-13A0A075B7E8 117 aa4.31□□□□□ -1.72
TUBGCP4-207ENST00000563963 EIF4EBP1Q13541 118 aaPredicted RBP4.31□□□□□ -1.72
TUBGCP4-207ENST00000563963 TNRC6BQ9UPQ9 1833 aaKnown RBP4.31□□□□□ -1.72
TUBGCP4-207ENST00000563963 I3L3M4 83 aa4.3□□□□□ -1.72
TUBGCP4-207ENST00000563963 SEC61BP60468 96 aaKnown RBP4.3□□□□□ -1.72
TUBGCP4-207ENST00000563963 TMEM14BQ9NUH8 114 aa4.3□□□□□ -1.72
TUBGCP4-207ENST00000563963 C11orf86A6NJI1 115 aa4.3□□□□□ -1.72
TUBGCP4-207ENST00000563963 C3orf84H3BNL1 204 aa4.3□□□□□ -1.72
TUBGCP4-207ENST00000563963 ERHP84090 104 aaKnown RBP4.3□□□□□ -1.72
TUBGCP4-207ENST00000563963 KLHL30-AS1Q8NEE0 82 aa4.3□□□□□ -1.72
TUBGCP4-207ENST00000563963 DNAH12Q6ZR08 3092 aa4.3□□□□□ -1.72
TUBGCP4-207ENST00000563963 C16orf90A8MZG2 172 aa4.3□□□□□ -1.72
TUBGCP4-207ENST00000563963 C19orf84I3L1E1 186 aa4.3□□□□□ -1.72
TUBGCP4-207ENST00000563963 Q6ZPA2 131 aa4.3□□□□□ -1.72
TUBGCP4-207ENST00000563963 FAM167A-AS1Q96KT0 104 aa4.3□□□□□ -1.72
TUBGCP4-207ENST00000563963 LINC00846Q9NV44 126 aa4.3□□□□□ -1.72
TUBGCP4-207ENST00000563963 IGHV3OR16-10A0A075B7F0 116 aa4.29□□□□□ -1.72
TUBGCP4-207ENST00000563963 hDV103S1A0JD37 113 aa4.29□□□□□ -1.72
TUBGCP4-207ENST00000563963 IGLV3-19P01714 112 aa4.29□□□□□ -1.72
TUBGCP4-207ENST00000563963 CCL3P10147 92 aa4.29□□□□□ -1.72
TUBGCP4-207ENST00000563963 FOLR3P41439 243 aa4.29□□□□□ -1.72
TUBGCP4-207ENST00000563963 DEFB119Q8N690 84 aa4.29□□□□□ -1.72
TUBGCP4-207ENST00000563963 HTTP42858 3142 aa4.29□□□□□ -1.72
TUBGCP4-207ENST00000563963 ZNF503-AS2A6NEH8 195 aa4.29□□□□□ -1.72
TUBGCP4-207ENST00000563963 C10orf113Q5VZT2 155 aa4.29□□□□□ -1.72
TUBGCP4-207ENST00000563963 SMAD5-AS1Q9Y6J3 95 aa4.29□□□□□ -1.72
TUBGCP4-207ENST00000563963 RTTNQ86VV8 2226 aa4.29□□□□□ -1.72
TUBGCP4-207ENST00000563963 Q6ZRP5 223 aa4.29□□□□□ -1.72
TUBGCP4-207ENST00000563963 F5P12259 2224 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms