RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 SNAPINO95295 136 aa10.53□□□□□ -0.72
RNF40-205ENST00000563909 MT1HL1P0DM35 61 aa10.53□□□□□ -0.72
RNF40-205ENST00000563909 SUMO4Q6EEV6 95 aa10.53□□□□□ -0.72
RNF40-205ENST00000563909 KCNIP4Q6PIL6 250 aa10.53□□□□□ -0.72
RNF40-205ENST00000563909 ATP5L2Q7Z4Y8 100 aa10.53□□□□□ -0.72
RNF40-205ENST00000563909 C10orf126Q8N4M7 172 aa10.53□□□□□ -0.72
RNF40-205ENST00000563909 ATP6V0E2Q8NHE4 81 aa10.53□□□□□ -0.72
RNF40-205ENST00000563909 RPS10P5Q9NQ39 176 aa10.53□□□□□ -0.72
RNF40-205ENST00000563909 TRBV7-3A0A075B6L6 115 aa10.52□□□□□ -0.73
RNF40-205ENST00000563909 M0QY20 66 aa10.52□□□□□ -0.73
RNF40-205ENST00000563909 HBBP68871 147 aa10.52□□□□□ -0.73
RNF40-205ENST00000563909 MRPL54Q6P161 138 aaKnown RBP10.52□□□□□ -0.73
RNF40-205ENST00000563909 BTF3L4Q96K17 158 aa10.52□□□□□ -0.73
RNF40-205ENST00000563909 DNAJC30Q96LL9 226 aa10.52□□□□□ -0.73
RNF40-205ENST00000563909 TNXBP22105 4242 aa10.51□□□□□ -0.73
RNF40-205ENST00000563909 LINC00694P0DN24 101 aa10.51□□□□□ -0.73
RNF40-205ENST00000563909 S100PP25815 95 aa10.51□□□□□ -0.73
RNF40-205ENST00000563909 CAMPP49913 170 aa10.51□□□□□ -0.73
RNF40-205ENST00000563909 TIRAPP58753 221 aa10.51□□□□□ -0.73
RNF40-205ENST00000563909 RASL11AQ6T310 242 aa10.51□□□□□ -0.73
RNF40-205ENST00000563909 NEXN-AS1Q8NBZ9 246 aa10.51□□□□□ -0.73
RNF40-205ENST00000563909 KRTAP9-2Q9BYQ4 174 aa10.51□□□□□ -0.73
RNF40-205ENST00000563909 Q9UF83 564 aa10.51□□□□□ -0.73
RNF40-205ENST00000563909 TRAV9-1A0A075B6T8 112 aa10.5□□□□□ -0.73
RNF40-205ENST00000563909 A0A1B0GXF2 115 aa10.5□□□□□ -0.73
RNF40-205ENST00000563909 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.5□□□□□ -0.73
RNF40-205ENST00000563909 CHAC1Q9BUX1 264 aa10.5□□□□□ -0.73
RNF40-205ENST00000563909 RAB4AP20338 218 aa10.49□□□□□ -0.73
RNF40-205ENST00000563909 UBE2D3P61077 147 aa10.49□□□□□ -0.73
RNF40-205ENST00000563909 UBE2D2P62837 147 aa10.49□□□□□ -0.73
RNF40-205ENST00000563909 LINC01620Q4KN68 170 aa10.49□□□□□ -0.73
RNF40-205ENST00000563909 AMN1Q8IY45 258 aa10.49□□□□□ -0.73
RNF40-205ENST00000563909 GATD1Q8NB37 220 aa10.49□□□□□ -0.73
RNF40-205ENST00000563909 GTSF1LQ9H1H1 148 aa10.49□□□□□ -0.73
RNF40-205ENST00000563909 Q9HAA7 133 aa10.49□□□□□ -0.73
RNF40-205ENST00000563909 NIT2Q9NQR4 276 aa10.49□□□□□ -0.73
RNF40-205ENST00000563909 HNRNPA3P51991 378 aaKnown RBP10.48□□□□□ -0.73
RNF40-205ENST00000563909 FAM104BQ5XKR9 115 aa10.48□□□□□ -0.73
RNF40-205ENST00000563909 MRAP2Q96G30 205 aa10.48□□□□□ -0.73
RNF40-205ENST00000563909 RNF185Q96GF1 192 aa10.48□□□□□ -0.73
RNF40-205ENST00000563909 TRAV26-2A0A0B4J265 109 aa10.47□□□□□ -0.73
RNF40-205ENST00000563909 DAZ4Q86SG3 579 aaKnown RBP10.47□□□□□ -0.73
RNF40-205ENST00000563909 CIRBP-AS1Q8TBR5 109 aa10.47□□□□□ -0.73
RNF40-205ENST00000563909 DAZ3Q9NR90 486 aaKnown RBP10.47□□□□□ -0.73
RNF40-205ENST00000563909 WFDC2Q14508 124 aa10.46□□□□□ -0.73
RNF40-205ENST00000563909 LELP1Q5T871 98 aa10.46□□□□□ -0.73
RNF40-205ENST00000563909 URGCP-MRPS24S4R325 110 aa10.46□□□□□ -0.73
RNF40-205ENST00000563909 TRAV8-6A0A0B4J262 113 aa10.45□□□□□ -0.74
RNF40-205ENST00000563909 IGHV3-38A0A0C4DH36 116 aa10.45□□□□□ -0.74
RNF40-205ENST00000563909 PPP1R17O96001 155 aa10.45□□□□□ -0.74
RNF40-205ENST00000563909 MRPL51Q4U2R6 128 aaKnown RBP10.45□□□□□ -0.74
RNF40-205ENST00000563909 TMEM97Q5BJF2 176 aa10.45□□□□□ -0.74
RNF40-205ENST00000563909 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.44□□□□□ -0.74
RNF40-205ENST00000563909 IBA57-AS1B1ANH7 110 aa10.44□□□□□ -0.74
RNF40-205ENST00000563909 RPL37AP61513 92 aaKnown RBP10.44□□□□□ -0.74
RNF40-205ENST00000563909 OR10J3Q5JRS4 329 aa10.44□□□□□ -0.74
RNF40-205ENST00000563909 RPL39LQ96EH5 51 aaKnown RBP10.44□□□□□ -0.74
RNF40-205ENST00000563909 TRBV6-5A0A0K0K1A5 114 aa10.43□□□□□ -0.74
RNF40-205ENST00000563909 LECT2O14960 151 aa10.43□□□□□ -0.74
RNF40-205ENST00000563909 CKS2P33552 79 aa10.43□□□□□ -0.74
RNF40-205ENST00000563909 COX19Q49B96 90 aa10.43□□□□□ -0.74
RNF40-205ENST00000563909 LINC01556Q5JQF7 62 aa10.43□□□□□ -0.74
RNF40-205ENST00000563909 GAS8-AS1O95177 125 aa10.42□□□□□ -0.74
RNF40-205ENST00000563909 PPBPP02775 128 aa10.42□□□□□ -0.74
RNF40-205ENST00000563909 ST20Q9HBF5 79 aa10.42□□□□□ -0.74
RNF40-205ENST00000563909 SMKR1H3BMG3 65 aa10.41□□□□□ -0.74
RNF40-205ENST00000563909 NCR2O95944 276 aa10.41□□□□□ -0.74
RNF40-205ENST00000563909 ATRAIDQ6UW56 229 aa10.41□□□□□ -0.74
RNF40-205ENST00000563909 TRBV6-8A0A0A6YYG3 113 aa10.4□□□□□ -0.74
RNF40-205ENST00000563909 KRTAP9-6A0A140TA67 174 aa10.4□□□□□ -0.74
RNF40-205ENST00000563909 SDHAF1A6NFY7 115 aa10.4□□□□□ -0.74
RNF40-205ENST00000563909 RPS10P46783 165 aaKnown RBP10.4□□□□□ -0.74
RNF40-205ENST00000563909 TMEM136Q6ZRR5 245 aa10.4□□□□□ -0.74
RNF40-205ENST00000563909 TRBV24-1A0A075B6N3 115 aa10.39□□□□□ -0.75
RNF40-205ENST00000563909 D6R8Y8 96 aa10.39□□□□□ -0.75
RNF40-205ENST00000563909 HLA-DQA1P01909 254 aa10.39□□□□□ -0.75
RNF40-205ENST00000563909 PMCHP20382 165 aa10.39□□□□□ -0.75
RNF40-205ENST00000563909 COTL1Q14019 142 aa10.39□□□□□ -0.75
RNF40-205ENST00000563909 ELOBQ15370 118 aa10.39□□□□□ -0.75
RNF40-205ENST00000563909 ORMDL3Q8N138 153 aa10.39□□□□□ -0.75
RNF40-205ENST00000563909 NRACQ8N912 160 aa10.39□□□□□ -0.75
RNF40-205ENST00000563909 TM2D2Q9BX73 214 aa10.39□□□□□ -0.75
RNF40-205ENST00000563909 GNB1LQ9BYB4 327 aa10.39□□□□□ -0.75
RNF40-205ENST00000563909 SMCO4Q9NRQ5 59 aa10.39□□□□□ -0.75
RNF40-205ENST00000563909 TRBV25-1A0A075B6N4 114 aa10.38□□□□□ -0.75
RNF40-205ENST00000563909 I3L3M4 83 aa10.38□□□□□ -0.75
RNF40-205ENST00000563909 PHOX2AO14813 284 aa10.38□□□□□ -0.75
RNF40-205ENST00000563909 IGHV3-30P01768 117 aa10.38□□□□□ -0.75
RNF40-205ENST00000563909 IGHV3-33P01772 117 aa10.38□□□□□ -0.75
RNF40-205ENST00000563909 IGHV3-30-3P0DP02 117 aa10.38□□□□□ -0.75
RNF40-205ENST00000563909 IGHV3-30-5P0DP03 117 aa10.38□□□□□ -0.75
RNF40-205ENST00000563909 POLR2KP53803 58 aaKnown RBP10.38□□□□□ -0.75
RNF40-205ENST00000563909 SUMO2P61956 95 aaKnown RBP10.38□□□□□ -0.75
RNF40-205ENST00000563909 NTM-AS1Q6ZSK4 140 aa10.38□□□□□ -0.75
RNF40-205ENST00000563909 C20orf78Q9BR46 151 aa10.38□□□□□ -0.75
RNF40-205ENST00000563909 TGIF2-C20orf24A0A0A6YYL0 155 aa10.37□□□□□ -0.75
RNF40-205ENST00000563909 IGHV1-24A0A0C4DH33 117 aa10.37□□□□□ -0.75
RNF40-205ENST00000563909 VCYO14598 125 aa10.37□□□□□ -0.75
RNF40-205ENST00000563909 TNFRSF6BO95407 300 aa10.37□□□□□ -0.75
RNF40-205ENST00000563909 APCSP02743 223 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms