RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.83□□□□□ -1.16
RNF40-204ENST00000563683 IGKV2-29A2NJV5 120 aaPredicted RBP7.83□□□□□ -1.16
RNF40-204ENST00000563683 C11orf86A6NJI1 115 aa7.83□□□□□ -1.16
RNF40-204ENST00000563683 KALRNO60229 2985 aa7.83□□□□□ -1.16
RNF40-204ENST00000563683 DEFB130BP0DP73 79 aa7.83□□□□□ -1.16
RNF40-204ENST00000563683 DEFB130AP0DP74 79 aa7.83□□□□□ -1.16
RNF40-204ENST00000563683 TMEM61Q8N0U2 210 aa7.83□□□□□ -1.16
RNF40-204ENST00000563683 CITED1Q99966 193 aa7.83□□□□□ -1.16
RNF40-204ENST00000563683 CFC1BP0CG36 223 aa7.82□□□□□ -1.16
RNF40-204ENST00000563683 CFC1P0CG37 223 aa7.82□□□□□ -1.16
RNF40-204ENST00000563683 IFITM1P13164 125 aa7.82□□□□□ -1.16
RNF40-204ENST00000563683 C9JAW5 83 aa7.82□□□□□ -1.16
RNF40-204ENST00000563683 M0R2P5 195 aa7.82□□□□□ -1.16
RNF40-204ENST00000563683 NDUFV3P56181 108 aaKnown RBP7.82□□□□□ -1.16
RNF40-204ENST00000563683 CFAP161Q6P656 301 aa7.82□□□□□ -1.16
RNF40-204ENST00000563683 U3KQE9 123 aa7.82□□□□□ -1.16
RNF40-204ENST00000563683 SLC25A29Q8N8R3 303 aa7.81□□□□□ -1.16
RNF40-204ENST00000563683 DMDP11532 3685 aa7.81□□□□□ -1.16
RNF40-204ENST00000563683 ATMQ13315 3056 aa7.81□□□□□ -1.16
RNF40-204ENST00000563683 IGHV3-30P01768 117 aa7.81□□□□□ -1.16
RNF40-204ENST00000563683 IGHV3-30-5P0DP03 117 aa7.81□□□□□ -1.16
RNF40-204ENST00000563683 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.81□□□□□ -1.16
RNF40-204ENST00000563683 P0DMU3 169 aa7.81□□□□□ -1.16
RNF40-204ENST00000563683 FAM231AP0DMU4 169 aa7.81□□□□□ -1.16
RNF40-204ENST00000563683 FAM231CP0DMU5 169 aa7.81□□□□□ -1.16
RNF40-204ENST00000563683 Q6Q795 121 aa7.81□□□□□ -1.16
RNF40-204ENST00000563683 NDUFA12Q9UI09 145 aa7.81□□□□□ -1.16
RNF40-204ENST00000563683 C11orf68Q9H3H3 251 aaKnown RBP7.8□□□□□ -1.16
RNF40-204ENST00000563683 TACC2O95359 2948 aa7.8□□□□□ -1.16
RNF40-204ENST00000563683 CEMP1Q6PRD7 247 aaPredicted RBP7.8□□□□□ -1.16
RNF40-204ENST00000563683 PRM2P04554 102 aa7.8□□□□□ -1.16
RNF40-204ENST00000563683 RNASE3P12724 160 aaKnown RBP7.8□□□□□ -1.16
RNF40-204ENST00000563683 ATXN8Q156A1 80 aa7.8□□□□□ -1.16
RNF40-204ENST00000563683 PRIMA1Q86XR5 153 aa7.8□□□□□ -1.16
RNF40-204ENST00000563683 TRAV8-4A0A0B4J246 113 aa7.79□□□□□ -1.16
RNF40-204ENST00000563683 RNASE1P07998 156 aaKnown RBP7.79□□□□□ -1.16
RNF40-204ENST00000563683 K7EQG2 157 aa7.79□□□□□ -1.16
RNF40-204ENST00000563683 CCL24O00175 119 aa7.79□□□□□ -1.16
RNF40-204ENST00000563683 MED14OSP0DP75 135 aa7.79□□□□□ -1.16
RNF40-204ENST00000563683 ASPMQ8IZT6 3477 aa7.79□□□□□ -1.16
RNF40-204ENST00000563683 RHOHQ15669 191 aa7.78□□□□□ -1.16
RNF40-204ENST00000563683 COPS9Q8WXC6 57 aa7.78□□□□□ -1.16
RNF40-204ENST00000563683 TRBV7-9A0A0J9YWB2 115 aa7.78□□□□□ -1.16
RNF40-204ENST00000563683 DNAL4O96015 105 aa7.78□□□□□ -1.16
RNF40-204ENST00000563683 LINC00158P58513 81 aa7.78□□□□□ -1.16
RNF40-204ENST00000563683 NOP10Q9NPE3 64 aaKnown RBP7.78□□□□□ -1.16
RNF40-204ENST00000563683 ZZEF1O43149 2961 aa7.78□□□□□ -1.16
RNF40-204ENST00000563683 NHLRC4P0CG21 123 aaPredicted RBP7.78□□□□□ -1.16
RNF40-204ENST00000563683 PSMB8P28062 276 aa7.78□□□□□ -1.16
RNF40-204ENST00000563683 A0A0B4J2C4 111 aa7.77□□□□□ -1.17
RNF40-204ENST00000563683 NTN5Q8WTR8 489 aaPredicted RBP7.77□□□□□ -1.17
RNF40-204ENST00000563683 FAM110AQ9BQ89 295 aa7.77□□□□□ -1.17
RNF40-204ENST00000563683 IGLV4-69A0A075B6H9 119 aa7.77□□□□□ -1.17
RNF40-204ENST00000563683 RPL32P62910 135 aaKnown RBP7.77□□□□□ -1.17
RNF40-204ENST00000563683 CRYGDP07320 174 aa7.77□□□□□ -1.17
RNF40-204ENST00000563683 TIMM17AQ99595 171 aa7.77□□□□□ -1.17
RNF40-204ENST00000563683 TRAV4A0A0B4J268 109 aa7.76□□□□□ -1.17
RNF40-204ENST00000563683 A4D1N5 150 aa7.76□□□□□ -1.17
RNF40-204ENST00000563683 IGHV3-33P01772 117 aa7.76□□□□□ -1.17
RNF40-204ENST00000563683 C18orf65Q6ZTR6 163 aa7.76□□□□□ -1.17
RNF40-204ENST00000563683 IGLV1-40P01703 118 aa7.76□□□□□ -1.17
RNF40-204ENST00000563683 TRAV8-3A0A0A6YYJ7 113 aa7.76□□□□□ -1.17
RNF40-204ENST00000563683 PROK1P58294 105 aa7.76□□□□□ -1.17
RNF40-204ENST00000563683 LINC01620Q4KN68 170 aa7.76□□□□□ -1.17
RNF40-204ENST00000563683 HIST2H2BCQ6DN03 193 aa7.76□□□□□ -1.17
RNF40-204ENST00000563683 C20orf203Q8NBC4 194 aa7.76□□□□□ -1.17
RNF40-204ENST00000563683 C2orf82Q6UX34 121 aa7.75□□□□□ -1.17
RNF40-204ENST00000563683 DCANP1Q8TF63 244 aa7.75□□□□□ -1.17
RNF40-204ENST00000563683 IGIPA6NJ69 53 aa7.75□□□□□ -1.17
RNF40-204ENST00000563683 IGHV4-31P0DP07 118 aa7.75□□□□□ -1.17
RNF40-204ENST00000563683 CMC4P56277 68 aaPredicted RBP7.75□□□□□ -1.17
RNF40-204ENST00000563683 MRPL23Q16540 153 aaKnown RBP7.75□□□□□ -1.17
RNF40-204ENST00000563683 LRBAP50851 2863 aa7.75□□□□□ -1.17
RNF40-204ENST00000563683 H3BMM0 161 aa7.75□□□□□ -1.17
RNF40-204ENST00000563683 C15orf53Q8NAA6 179 aa7.75□□□□□ -1.17
RNF40-204ENST00000563683 UBE2WQ96B02 151 aa7.75□□□□□ -1.17
RNF40-204ENST00000563683 TRBV10-2A0A0K0K1G8 114 aa7.74□□□□□ -1.17
RNF40-204ENST00000563683 CCDC179H3BU77 68 aa7.74□□□□□ -1.17
RNF40-204ENST00000563683 Q6YL49 198 aa7.74□□□□□ -1.17
RNF40-204ENST00000563683 MUSTN1Q8IVN3 82 aa7.74□□□□□ -1.17
RNF40-204ENST00000563683 TMEM263Q8WUH6 116 aaKnown RBP7.74□□□□□ -1.17
RNF40-204ENST00000563683 A0A096LPF7 62 aa7.74□□□□□ -1.17
RNF40-204ENST00000563683 TMEM89A2RUT3 159 aa7.74□□□□□ -1.17
RNF40-204ENST00000563683 LEPROTO15243 131 aa7.74□□□□□ -1.17
RNF40-204ENST00000563683 DAND5Q8N907 189 aa7.74□□□□□ -1.17
RNF40-204ENST00000563683 SMIM20Q8N5G0 67 aa7.74□□□□□ -1.17
RNF40-204ENST00000563683 KLLNB2CW77 178 aa7.73□□□□□ -1.17
RNF40-204ENST00000563683 WFDC11Q8NEX6 87 aa7.73□□□□□ -1.17
RNF40-204ENST00000563683 LINC01600Q96MT4 127 aa7.73□□□□□ -1.17
RNF40-204ENST00000563683 TSHBP01222 138 aa7.73□□□□□ -1.17
RNF40-204ENST00000563683 CRIP2P52943 208 aaPredicted RBP7.73□□□□□ -1.17
RNF40-204ENST00000563683 KRTAP10-9P60411 292 aa7.73□□□□□ -1.17
RNF40-204ENST00000563683 HERV-K104P63124 156 aa7.73□□□□□ -1.17
RNF40-204ENST00000563683 C6orf226Q5I0X4 101 aa7.73□□□□□ -1.17
RNF40-204ENST00000563683 M0QY20 66 aa7.73□□□□□ -1.17
RNF40-204ENST00000563683 PAX4O43316 350 aa7.73□□□□□ -1.17
RNF40-204ENST00000563683 TSPEAR-AS2P59090 65 aa7.73□□□□□ -1.17
RNF40-204ENST00000563683 CITED2Q99967 270 aaPredicted RBP7.73□□□□□ -1.17
RNF40-204ENST00000563683 MAP6D1Q9H9H5 199 aa7.73□□□□□ -1.17
RNF40-204ENST00000563683 CRLF1O75462 422 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms