RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 Q6ZUT4 128 aa-0.5□□□□□ -2.49
DENND4A-205ENST00000562540 SPTSSAQ969W0 71 aa-0.5□□□□□ -2.49
DENND4A-205ENST00000562540 SCN3BQ9NY72 215 aa-0.5□□□□□ -2.49
DENND4A-205ENST00000562540 SPCS1Q9Y6A9 102 aa-0.5□□□□□ -2.49
DENND4A-205ENST00000562540 CHD8Q9HCK8 2581 aa-0.5□□□□□ -2.49
DENND4A-205ENST00000562540 SIPA1L3O60292 1781 aaPredicted RBP-0.5□□□□□ -2.49
DENND4A-205ENST00000562540 NCR2O95944 276 aa-0.51□□□□□ -2.49
DENND4A-205ENST00000562540 SPRR2DP22532 72 aa-0.51□□□□□ -2.49
DENND4A-205ENST00000562540 S100A7L2Q5SY68 101 aa-0.51□□□□□ -2.49
DENND4A-205ENST00000562540 CFAP126Q5VTH2 177 aa-0.51□□□□□ -2.49
DENND4A-205ENST00000562540 SCIMPQ6UWF3 145 aa-0.51□□□□□ -2.49
DENND4A-205ENST00000562540 TENM2Q9NT68 2774 aa-0.51□□□□□ -2.49
DENND4A-205ENST00000562540 LINC00312Q9Y6C7 94 aa-0.51□□□□□ -2.49
DENND4A-205ENST00000562540 DOPEY1Q5JWR5 2465 aa-0.52□□□□□ -2.49
DENND4A-205ENST00000562540 LPAP08519 4548 aa-0.52□□□□□ -2.49
DENND4A-205ENST00000562540 NDUFB6O95139 128 aa-0.52□□□□□ -2.49
DENND4A-205ENST00000562540 Q8IZM0 81 aa-0.52□□□□□ -2.49
DENND4A-205ENST00000562540 LZICQ8WZA0 190 aa-0.52□□□□□ -2.49
DENND4A-205ENST00000562540 IFT172Q9UG01 1749 aa-0.52□□□□□ -2.49
DENND4A-205ENST00000562540 DAPK1P53355 1430 aa-0.53□□□□□ -2.49
DENND4A-205ENST00000562540 TMEM2Q9UHN6 1383 aa-0.53□□□□□ -2.49
DENND4A-205ENST00000562540 ATRQ13535 2644 aa-0.53□□□□□ -2.49
DENND4A-205ENST00000562540 S100A3P33764 101 aa-0.53□□□□□ -2.49
DENND4A-205ENST00000562540 SPRR1AP35321 89 aa-0.53□□□□□ -2.49
DENND4A-205ENST00000562540 DR1Q01658 176 aa-0.53□□□□□ -2.49
DENND4A-205ENST00000562540 SPAG11BQ08648 103 aa-0.53□□□□□ -2.49
DENND4A-205ENST00000562540 CCL8P80075 99 aa-0.54□□□□□ -2.5
DENND4A-205ENST00000562540 AKAP14Q86UN6 197 aa-0.54□□□□□ -2.5
DENND4A-205ENST00000562540 KCNRGQ8N5I3 272 aa-0.54□□□□□ -2.5
DENND4A-205ENST00000562540 SEC11CQ9BY50 192 aa-0.54□□□□□ -2.5
DENND4A-205ENST00000562540 R4GMQ9 66 aa-0.54□□□□□ -2.5
DENND4A-205ENST00000562540 ZNF609O15014 1411 aa-0.55□□□□□ -2.5
DENND4A-205ENST00000562540 PPRC1Q5VV67 1664 aaKnown RBP-0.55□□□□□ -2.5
DENND4A-205ENST00000562540 ARPC5O15511 151 aa-0.55□□□□□ -2.5
DENND4A-205ENST00000562540 BCE1O60756 84 aa-0.55□□□□□ -2.5
DENND4A-205ENST00000562540 GUCA1AP43080 201 aaPredicted RBP-0.55□□□□□ -2.5
DENND4A-205ENST00000562540 PDZD2O15018 2839 aa-0.55□□□□□ -2.5
DENND4A-205ENST00000562540 TNXBP22105 4242 aa-0.55□□□□□ -2.5
DENND4A-205ENST00000562540 KDM3BQ7LBC6 1761 aa-0.55□□□□□ -2.5
DENND4A-205ENST00000562540 RYR2Q92736 4967 aa-0.55□□□□□ -2.5
DENND4A-205ENST00000562540 ANKRD30AQ9BXX3 1397 aa-0.56□□□□□ -2.5
DENND4A-205ENST00000562540 ADGRB1O14514 1584 aa-0.56□□□□□ -2.5
DENND4A-205ENST00000562540 PPP1R17O96001 155 aa-0.56□□□□□ -2.5
DENND4A-205ENST00000562540 PRM1P04553 51 aa-0.56□□□□□ -2.5
DENND4A-205ENST00000562540 HAMPP81172 84 aa-0.56□□□□□ -2.5
DENND4A-205ENST00000562540 KRTAP19-7Q3SYF9 63 aa-0.56□□□□□ -2.5
DENND4A-205ENST00000562540 TSTD1Q8NFU3 115 aa-0.56□□□□□ -2.5
DENND4A-205ENST00000562540 LRRC37A3O60309 1634 aa-0.56□□□□□ -2.5
DENND4A-205ENST00000562540 SETXQ7Z333 2677 aaKnown RBP-0.57□□□□□ -2.5
DENND4A-205ENST00000562540 UBR4Q5T4S7 5183 aa-0.57□□□□□ -2.5
DENND4A-205ENST00000562540 CCL18P55774 89 aa-0.57□□□□□ -2.5
DENND4A-205ENST00000562540 SMIM4Q8WVI0 70 aa-0.57□□□□□ -2.5
DENND4A-205ENST00000562540 PRG4Q92954 1404 aaPredicted RBP-0.57□□□□□ -2.5
DENND4A-205ENST00000562540 CREBBPQ92793 2442 aa-0.57□□□□□ -2.5
DENND4A-205ENST00000562540 NF1P21359 2839 aa-0.57□□□□□ -2.5
DENND4A-205ENST00000562540 RYR1P21817 5038 aa-0.57□□□□□ -2.5
DENND4A-205ENST00000562540 FAT2Q9NYQ8 4349 aa-0.58□□□□□ -2.5
DENND4A-205ENST00000562540 KIAA1109Q2LD37 5005 aa-0.58□□□□□ -2.5
DENND4A-205ENST00000562540 M0R135 149 aa-0.58□□□□□ -2.5
DENND4A-205ENST00000562540 SIX6O95475 246 aa-0.58□□□□□ -2.5
DENND4A-205ENST00000562540 COPZ1P61923 177 aa-0.58□□□□□ -2.5
DENND4A-205ENST00000562540 DCDP81605 110 aaKnown RBP-0.58□□□□□ -2.5
DENND4A-205ENST00000562540 COPZ2Q9P299 210 aa-0.58□□□□□ -2.5
DENND4A-205ENST00000562540 HECTD4Q9Y4D8 3996 aa-0.58□□□□□ -2.5
DENND4A-205ENST00000562540 FLNBO75369 2602 aaKnown RBP-0.58□□□□□ -2.5
DENND4A-205ENST00000562540 EP300Q09472 2414 aaPredicted RBP-0.59□□□□□ -2.5
DENND4A-205ENST00000562540 ALX1Q15699 326 aa-0.59□□□□□ -2.5
DENND4A-205ENST00000562540 TPT1P8Q9HAU6 139 aa-0.59□□□□□ -2.5
DENND4A-205ENST00000562540 TP53AIP1Q9HCN2 124 aa-0.59□□□□□ -2.5
DENND4A-205ENST00000562540 DNAJC13O75165 2243 aa-0.59□□□□□ -2.5
DENND4A-205ENST00000562540 CNOT1A5YKK6 2376 aaKnown RBP-0.59□□□□□ -2.5
DENND4A-205ENST00000562540 BSNQ9UPA5 3926 aa-0.59□□□□□ -2.5
DENND4A-205ENST00000562540 HERC2O95714 4834 aa-0.6□□□□□ -2.51
DENND4A-205ENST00000562540 NWD2Q9ULI1 1742 aa-0.6□□□□□ -2.51
DENND4A-205ENST00000562540 STAB2Q8WWQ8 2551 aa-0.6□□□□□ -2.51
DENND4A-205ENST00000562540 FXYD6-FXYD2A0A087WZ82 144 aa-0.6□□□□□ -2.51
DENND4A-205ENST00000562540 PIGBOS1A0A0B4J2F0 54 aa-0.6□□□□□ -2.51
DENND4A-205ENST00000562540 CTXND1A0A1B0GTU2 59 aa-0.6□□□□□ -2.51
DENND4A-205ENST00000562540 HCG22E2RYF7 251 aa-0.6□□□□□ -2.51
DENND4A-205ENST00000562540 RPS25P62851 125 aaKnown RBP-0.6□□□□□ -2.51
DENND4A-205ENST00000562540 C10orf128Q5T292 105 aa-0.6□□□□□ -2.51
DENND4A-205ENST00000562540 TCEAL4Q96EI5 215 aa-0.6□□□□□ -2.51
DENND4A-205ENST00000562540 AQP10Q96PS8 301 aa-0.6□□□□□ -2.51
DENND4A-205ENST00000562540 ALMS1Q8TCU4 4167 aa-0.6□□□□□ -2.51
DENND4A-205ENST00000562540 IFT140Q96RY7 1462 aa-0.61□□□□□ -2.51
DENND4A-205ENST00000562540 SPEF2Q9C093 1822 aa-0.61□□□□□ -2.51
DENND4A-205ENST00000562540 FHAD1B1AJZ9 1412 aa-0.61□□□□□ -2.51
DENND4A-205ENST00000562540 CASKIN1Q8WXD9 1431 aa-0.61□□□□□ -2.51
DENND4A-205ENST00000562540 SPAG11AQ6PDA7 123 aa-0.61□□□□□ -2.51
DENND4A-205ENST00000562540 SDF2Q99470 211 aa-0.61□□□□□ -2.51
DENND4A-205ENST00000562540 EPPK1P58107 5090 aaKnown RBP-0.61□□□□□ -2.51
DENND4A-205ENST00000562540 PRDM2Q13029 1718 aa-0.61□□□□□ -2.51
DENND4A-205ENST00000562540 ZNF518AQ6AHZ1 1483 aa-0.61□□□□□ -2.51
DENND4A-205ENST00000562540 ERCC6L2Q5T890 1561 aa-0.62□□□□□ -2.51
DENND4A-205ENST00000562540 C10orf71Q711Q0 1435 aa-0.62□□□□□ -2.51
DENND4A-205ENST00000562540 TRAV13-2A0A0B4J235 113 aa-0.62□□□□□ -2.51
DENND4A-205ENST00000562540 SMCO1Q147U7 214 aa-0.62□□□□□ -2.51
DENND4A-205ENST00000562540 MAFIPQ8WZ33 124 aa-0.62□□□□□ -2.51
DENND4A-205ENST00000562540 ANP32BQ92688 251 aaKnown RBP-0.62□□□□□ -2.51
DENND4A-205ENST00000562540 DPH3Q96FX2 82 aa-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 192.9 ms