RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 C20orf78Q9BR46 151 aa9.01□□□□□ -0.97
CDH1-204ENST00000562118 A0A1B0GUV1 79 aa9□□□□□ -0.97
CDH1-204ENST00000562118 SMKR1H3BMG3 65 aa9□□□□□ -0.97
CDH1-204ENST00000562118 I3L3M4 83 aa9□□□□□ -0.97
CDH1-204ENST00000562118 TSHBP01222 138 aa9□□□□□ -0.97
CDH1-204ENST00000562118 ESDP10768 282 aa9□□□□□ -0.97
CDH1-204ENST00000562118 SUMO2P61956 95 aaKnown RBP9□□□□□ -0.97
CDH1-204ENST00000562118 COTL1Q14019 142 aa9□□□□□ -0.97
CDH1-204ENST00000562118 MPV17L2Q567V2 206 aa9□□□□□ -0.97
CDH1-204ENST00000562118 TMEM136Q6ZRR5 245 aa9□□□□□ -0.97
CDH1-204ENST00000562118 ST20Q9HBF5 79 aa9□□□□□ -0.97
CDH1-204ENST00000562118 H7C423 109 aa8.99□□□□□ -0.97
CDH1-204ENST00000562118 SNAPINO95295 136 aa8.99□□□□□ -0.97
CDH1-204ENST00000562118 IGHV3-30P01768 117 aa8.99□□□□□ -0.97
CDH1-204ENST00000562118 IGHV3-33P01772 117 aa8.99□□□□□ -0.97
CDH1-204ENST00000562118 APOC3P02656 99 aa8.99□□□□□ -0.97
CDH1-204ENST00000562118 IGHV3-30-3P0DP02 117 aa8.99□□□□□ -0.97
CDH1-204ENST00000562118 IGHV3-30-5P0DP03 117 aa8.99□□□□□ -0.97
CDH1-204ENST00000562118 YPEL4Q96NS1 127 aa8.99□□□□□ -0.97
CDH1-204ENST00000562118 TMEM243Q9BU79 118 aa8.99□□□□□ -0.97
CDH1-204ENST00000562118 PRR34Q9NV39 138 aa8.99□□□□□ -0.97
CDH1-204ENST00000562118 LAMTOR2Q9Y2Q5 125 aa8.99□□□□□ -0.97
CDH1-204ENST00000562118 PRSS29PA6NIE9 313 aa8.98□□□□□ -0.97
CDH1-204ENST00000562118 D6R8Y8 96 aa8.98□□□□□ -0.97
CDH1-204ENST00000562118 TNFRSF6BO95407 300 aa8.98□□□□□ -0.97
CDH1-204ENST00000562118 TNP2Q05952 138 aa8.98□□□□□ -0.97
CDH1-204ENST00000562118 NDUFA5Q16718 116 aa8.98□□□□□ -0.97
CDH1-204ENST00000562118 ORMDL3Q8N138 153 aa8.98□□□□□ -0.97
CDH1-204ENST00000562118 RPS10P5Q9NQ39 176 aa8.98□□□□□ -0.97
CDH1-204ENST00000562118 VCYO14598 125 aa8.97□□□□□ -0.97
CDH1-204ENST00000562118 NPYP01303 97 aa8.97□□□□□ -0.97
CDH1-204ENST00000562118 CKS2P33552 79 aa8.97□□□□□ -0.97
CDH1-204ENST00000562118 RBX1P62877 108 aa8.97□□□□□ -0.97
CDH1-204ENST00000562118 ELOBQ15370 118 aa8.97□□□□□ -0.97
CDH1-204ENST00000562118 SLC7A5P1Q8MH63 180 aa8.97□□□□□ -0.97
CDH1-204ENST00000562118 CHCHD5Q9BSY4 110 aa8.97□□□□□ -0.97
CDH1-204ENST00000562118 GNB1LQ9BYB4 327 aa8.97□□□□□ -0.97
CDH1-204ENST00000562118 A0A087WX48 190 aa8.96□□□□□ -0.98
CDH1-204ENST00000562118 TRAV8-3A0A0A6YYJ7 113 aa8.96□□□□□ -0.98
CDH1-204ENST00000562118 APCSP02743 223 aa8.96□□□□□ -0.98
CDH1-204ENST00000562118 S100PP25815 95 aa8.96□□□□□ -0.98
CDH1-204ENST00000562118 AMTP48728 403 aa8.96□□□□□ -0.98
CDH1-204ENST00000562118 COX19Q49B96 90 aa8.96□□□□□ -0.98
CDH1-204ENST00000562118 C20orf203Q8NBC4 194 aa8.96□□□□□ -0.98
CDH1-204ENST00000562118 SMIM2Q9BVW6 85 aa8.96□□□□□ -0.98
CDH1-204ENST00000562118 URGCP-MRPS24S4R325 110 aa8.96□□□□□ -0.98
CDH1-204ENST00000562118 LRP1BQ9NZR2 4599 aa8.96□□□□□ -0.98
CDH1-204ENST00000562118 HLA-DQA1P01909 254 aa8.95□□□□□ -0.98
CDH1-204ENST00000562118 GAGE6Q13070 117 aa8.95□□□□□ -0.98
CDH1-204ENST00000562118 ENHOQ6UWT2 76 aa8.95□□□□□ -0.98
CDH1-204ENST00000562118 MRPL52Q86TS9 123 aaKnown RBP8.95□□□□□ -0.98
CDH1-204ENST00000562118 Q8N976 141 aa8.95□□□□□ -0.98
CDH1-204ENST00000562118 LRCOL1A6NCL2 159 aa8.94□□□□□ -0.98
CDH1-204ENST00000562118 TCAPO15273 167 aa8.94□□□□□ -0.98
CDH1-204ENST00000562118 ZNF25P17030 456 aaPredicted RBP8.94□□□□□ -0.98
CDH1-204ENST00000562118 PMCHP20382 165 aa8.94□□□□□ -0.98
CDH1-204ENST00000562118 Q0VG73 95 aa8.94□□□□□ -0.98
CDH1-204ENST00000562118 PRELID3AQ96N28 172 aa8.94□□□□□ -0.98
CDH1-204ENST00000562118 KLK12Q9UKR0 248 aa8.94□□□□□ -0.98
CDH1-204ENST00000562118 IGLV4-60A0A075B6I1 120 aa8.93□□□□□ -0.98
CDH1-204ENST00000562118 MT-ND6P03923 174 aa8.93□□□□□ -0.98
CDH1-204ENST00000562118 KRTAP26-1Q6PEX3 210 aa8.93□□□□□ -0.98
CDH1-204ENST00000562118 CSDC2Q9Y534 153 aaKnown RBP8.93□□□□□ -0.98
CDH1-204ENST00000562118 TMEM262E9PQX1 116 aa8.92□□□□□ -0.98
CDH1-204ENST00000562118 MIAQ16674 131 aa8.92□□□□□ -0.98
CDH1-204ENST00000562118 DEFB104AQ8WTQ1 72 aa8.92□□□□□ -0.98
CDH1-204ENST00000562118 KIR2DL4Q99706 377 aa8.92□□□□□ -0.98
CDH1-204ENST00000562118 COX11Q9Y6N1 276 aa8.92□□□□□ -0.98
CDH1-204ENST00000562118 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.91□□□□□ -0.98
CDH1-204ENST00000562118 A0A087WTM6 91 aa8.91□□□□□ -0.98
CDH1-204ENST00000562118 IGKV2-29A2NJV5 120 aaPredicted RBP8.91□□□□□ -0.98
CDH1-204ENST00000562118 ANGP03950 147 aaKnown RBP8.91□□□□□ -0.98
CDH1-204ENST00000562118 FGF6P10767 208 aa8.91□□□□□ -0.98
CDH1-204ENST00000562118 LCE2DQ5TA82 110 aaPredicted RBP8.91□□□□□ -0.98
CDH1-204ENST00000562118 MAPKAPK5-AS1Q8N8E1 139 aa8.91□□□□□ -0.98
CDH1-204ENST00000562118 TM2D2Q9BX73 214 aa8.91□□□□□ -0.98
CDH1-204ENST00000562118 TGIF2-C20orf24A0A0A6YYL0 155 aa8.9□□□□□ -0.98
CDH1-204ENST00000562118 LINC01546A6NGU7 62 aa8.9□□□□□ -0.98
CDH1-204ENST00000562118 K7EMI3 77 aa8.9□□□□□ -0.98
CDH1-204ENST00000562118 UBE2L6O14933 153 aa8.9□□□□□ -0.98
CDH1-204ENST00000562118 LINC00269Q8N2A0 174 aa8.9□□□□□ -0.98
CDH1-204ENST00000562118 UBE2WQ96B02 151 aa8.9□□□□□ -0.98
CDH1-204ENST00000562118 RMI2Q96E14 147 aa8.9□□□□□ -0.98
CDH1-204ENST00000562118 TIMM21Q9BVV7 248 aa8.9□□□□□ -0.98
CDH1-204ENST00000562118 Q9HAA7 133 aa8.9□□□□□ -0.98
CDH1-204ENST00000562118 REG3AQ06141 175 aa8.89□□□□□ -0.99
CDH1-204ENST00000562118 Q8N8P6 123 aa8.89□□□□□ -0.99
CDH1-204ENST00000562118 FAM104AQ969W3 186 aa8.89□□□□□ -0.99
CDH1-204ENST00000562118 ALKBH7Q9BT30 221 aaPredicted RBP8.89□□□□□ -0.99
CDH1-204ENST00000562118 MAP1LC3AQ9H492 121 aa8.89□□□□□ -0.99
CDH1-204ENST00000562118 UBE2D4Q9Y2X8 147 aa8.89□□□□□ -0.99
CDH1-204ENST00000562118 DNAH8Q96JB1 4490 aa8.88□□□□□ -0.99
CDH1-204ENST00000562118 TRAV8-4A0A0B4J246 113 aa8.88□□□□□ -0.99
CDH1-204ENST00000562118 FCER1GP30273 86 aa8.88□□□□□ -0.99
CDH1-204ENST00000562118 CDC42SE2Q9NRR3 84 aa8.88□□□□□ -0.99
CDH1-204ENST00000562118 APOBP04114 4563 aaKnown RBP8.88□□□□□ -0.99
CDH1-204ENST00000562118 CRPP02741 224 aa8.87□□□□□ -0.99
CDH1-204ENST00000562118 KRTAP10-2P60368 255 aa8.87□□□□□ -0.99
CDH1-204ENST00000562118 MRPL18Q9H0U6 180 aaKnown RBP8.87□□□□□ -0.99
CDH1-204ENST00000562118 NXT2Q9NPJ8 142 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms