RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 UPK3BQ9BT76 320 aa11.68□□□□□ -0.54
PBX1-219ENST00000560641 RPL18AQ02543 176 aaKnown RBP11.68□□□□□ -0.54
PBX1-219ENST00000560641 TACC2O95359 2948 aa11.68□□□□□ -0.54
PBX1-219ENST00000560641 BAALC-AS2P0C853 105 aa11.67□□□□□ -0.54
PBX1-219ENST00000560641 Q6JHZ5 121 aa11.67□□□□□ -0.54
PBX1-219ENST00000560641 OVOL2Q9BRP0 275 aa11.67□□□□□ -0.54
PBX1-219ENST00000560641 ROS1P08922 2347 aa11.67□□□□□ -0.54
PBX1-219ENST00000560641 CSMD1Q96PZ7 3565 aa11.67□□□□□ -0.54
PBX1-219ENST00000560641 IGLV1-40P01703 118 aa11.65□□□□□ -0.54
PBX1-219ENST00000560641 ATP5J2P56134 94 aa11.65□□□□□ -0.54
PBX1-219ENST00000560641 ASPMQ8IZT6 3477 aa11.65□□□□□ -0.54
PBX1-219ENST00000560641 RPL28P46779 137 aaKnown RBP11.65□□□□□ -0.54
PBX1-219ENST00000560641 GPR179Q6PRD1 2367 aa11.65□□□□□ -0.54
PBX1-219ENST00000560641 A8MZ25 164 aa11.65□□□□□ -0.54
PBX1-219ENST00000560641 NPC2P61916 151 aa11.65□□□□□ -0.54
PBX1-219ENST00000560641 KLK5Q9Y337 293 aaPredicted RBP11.64□□□□□ -0.55
PBX1-219ENST00000560641 DPH3Q96FX2 82 aa11.64□□□□□ -0.55
PBX1-219ENST00000560641 SOSTDC1Q6X4U4 206 aa11.64□□□□□ -0.55
PBX1-219ENST00000560641 Q8N2B8 174 aa11.64□□□□□ -0.55
PBX1-219ENST00000560641 SERP2Q8N6R1 65 aa11.64□□□□□ -0.55
PBX1-219ENST00000560641 CDKN2A-AS1Q9UH64 79 aa11.64□□□□□ -0.55
PBX1-219ENST00000560641 ZNF625Q96I27 306 aaPredicted RBP11.63□□□□□ -0.55
PBX1-219ENST00000560641 TRAV25A0A0B4J276 109 aa11.63□□□□□ -0.55
PBX1-219ENST00000560641 MALP21145 153 aa11.63□□□□□ -0.55
PBX1-219ENST00000560641 CFHR3Q02985 330 aa11.63□□□□□ -0.55
PBX1-219ENST00000560641 A8MTW9 85 aa11.62□□□□□ -0.55
PBX1-219ENST00000560641 HIST2H2BCQ6DN03 193 aa11.62□□□□□ -0.55
PBX1-219ENST00000560641 HIST2H2BDQ6DRA6 164 aa11.62□□□□□ -0.55
PBX1-219ENST00000560641 FAM218AQ96MZ4 157 aa11.62□□□□□ -0.55
PBX1-219ENST00000560641 ABCA4P78363 2273 aa11.62□□□□□ -0.55
PBX1-219ENST00000560641 ADGRG4Q8IZF6 3080 aa11.62□□□□□ -0.55
PBX1-219ENST00000560641 BOD1L1Q8NFC6 3051 aa11.62□□□□□ -0.55
PBX1-219ENST00000560641 K7EQG2 157 aa11.62□□□□□ -0.55
PBX1-219ENST00000560641 PIMREGQ9BSJ6 248 aa11.61□□□□□ -0.55
PBX1-219ENST00000560641 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.6□□□□□ -0.55
PBX1-219ENST00000560641 DCHS2Q6V1P9 2916 aa11.6□□□□□ -0.55
PBX1-219ENST00000560641 POLEQ07864 2286 aa11.6□□□□□ -0.55
PBX1-219ENST00000560641 LMO4P61968 165 aa11.6□□□□□ -0.55
PBX1-219ENST00000560641 PRIMA1Q86XR5 153 aa11.6□□□□□ -0.55
PBX1-219ENST00000560641 WNK2Q9Y3S1 2297 aa11.6□□□□□ -0.55
PBX1-219ENST00000560641 SNRPD3P62318 126 aaKnown RBP11.6□□□□□ -0.55
PBX1-219ENST00000560641 LINC00467Q9BRT7 94 aa11.6□□□□□ -0.55
PBX1-219ENST00000560641 Q9H8V8 135 aa11.6□□□□□ -0.55
PBX1-219ENST00000560641 MUC3AQ02505 3323 aa11.59□□□□□ -0.55
PBX1-219ENST00000560641 hADV29S1A0JD25 119 aa11.59□□□□□ -0.55
PBX1-219ENST00000560641 GRNP28799 593 aaKnown RBP11.59□□□□□ -0.55
PBX1-219ENST00000560641 TRAV13-2A0A0B4J235 113 aa11.59□□□□□ -0.55
PBX1-219ENST00000560641 NDUFC2-KCTD14E9PQ53 114 aa11.59□□□□□ -0.55
PBX1-219ENST00000560641 TRAV12-2A0A075B6T6 113 aa11.58□□□□□ -0.56
PBX1-219ENST00000560641 SMIM1B2RUZ4 78 aa11.58□□□□□ -0.56
PBX1-219ENST00000560641 CYSTM1Q9H1C7 97 aa11.58□□□□□ -0.56
PBX1-219ENST00000560641 RNASE13Q5GAN3 156 aaKnown RBP11.57□□□□□ -0.56
PBX1-219ENST00000560641 NACAE9PAV3 2078 aa11.57□□□□□ -0.56
PBX1-219ENST00000560641 LINC00242Q5T6M2 205 aa11.56□□□□□ -0.56
PBX1-219ENST00000560641 IGKV3-7A0A075B6H7 116 aa11.56□□□□□ -0.56
PBX1-219ENST00000560641 IGHV3OR16-12A0A075B7B8 117 aa11.56□□□□□ -0.56
PBX1-219ENST00000560641 IGHV3-53P01767 116 aa11.56□□□□□ -0.56
PBX1-219ENST00000560641 A6NDX4 124 aa11.56□□□□□ -0.56
PBX1-219ENST00000560641 IGHV3-11P01762 117 aa11.55□□□□□ -0.56
PBX1-219ENST00000560641 COX6A2Q02221 97 aa11.55□□□□□ -0.56
PBX1-219ENST00000560641 SPINK13Q1W4C9 94 aa11.55□□□□□ -0.56
PBX1-219ENST00000560641 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.54□□□□□ -0.56
PBX1-219ENST00000560641 IGKV2-29A2NJV5 120 aaPredicted RBP11.54□□□□□ -0.56
PBX1-219ENST00000560641 F5H768 121 aa11.54□□□□□ -0.56
PBX1-219ENST00000560641 K7ENP7 123 aa11.54□□□□□ -0.56
PBX1-219ENST00000560641 EDN2P20800 178 aa11.54□□□□□ -0.56
PBX1-219ENST00000560641 DNAL4O96015 105 aa11.54□□□□□ -0.56
PBX1-219ENST00000560641 PROK1P58294 105 aa11.54□□□□□ -0.56
PBX1-219ENST00000560641 TMEM89A2RUT3 159 aa11.53□□□□□ -0.56
PBX1-219ENST00000560641 H0YGX0 51 aa11.53□□□□□ -0.56
PBX1-219ENST00000560641 RBMY1A1P0DJD3 496 aaKnown RBP11.53□□□□□ -0.56
PBX1-219ENST00000560641 RBMY1CP0DJD4 496 aa11.53□□□□□ -0.56
PBX1-219ENST00000560641 RBMY1FQ15415 496 aaKnown RBP11.53□□□□□ -0.56
PBX1-219ENST00000560641 LINC01561Q8N1V8 128 aa11.53□□□□□ -0.56
PBX1-219ENST00000560641 Q5XG85 94 aa11.53□□□□□ -0.56
PBX1-219ENST00000560641 OXTP01178 125 aa11.52□□□□□ -0.56
PBX1-219ENST00000560641 EPM2AB3EWF7 344 aa11.52□□□□□ -0.57
PBX1-219ENST00000560641 Q6ZSN1 163 aa11.52□□□□□ -0.57
PBX1-219ENST00000560641 ATP5EP2Q5VTU8 51 aa11.52□□□□□ -0.57
PBX1-219ENST00000560641 NCOR1O75376 2440 aa11.52□□□□□ -0.57
PBX1-219ENST00000560641 UBTD1Q9HAC8 227 aa11.51□□□□□ -0.57
PBX1-219ENST00000560641 APC2O95996 2303 aa11.51□□□□□ -0.57
PBX1-219ENST00000560641 USP17L23D6RBM5 183 aa11.5□□□□□ -0.57
PBX1-219ENST00000560641 NDUFC2O95298 119 aa11.5□□□□□ -0.57
PBX1-219ENST00000560641 LYPD5Q6UWN5 251 aa11.5□□□□□ -0.57
PBX1-219ENST00000560641 LINC00846Q9NV44 126 aa11.5□□□□□ -0.57
PBX1-219ENST00000560641 RS1O15537 224 aa11.5□□□□□ -0.57
PBX1-219ENST00000560641 PSMB8P28062 276 aa11.49□□□□□ -0.57
PBX1-219ENST00000560641 KIR2DL5BQ8NHK3 375 aa11.49□□□□□ -0.57
PBX1-219ENST00000560641 SPTBN2O15020 2390 aa11.49□□□□□ -0.57
PBX1-219ENST00000560641 CRPP02741 224 aa11.48□□□□□ -0.57
PBX1-219ENST00000560641 Q9UF83 564 aa11.48□□□□□ -0.57
PBX1-219ENST00000560641 IGKV2-28A0A075B6P5 120 aa11.48□□□□□ -0.57
PBX1-219ENST00000560641 IGKV2D-28P01615 120 aa11.48□□□□□ -0.57
PBX1-219ENST00000560641 CNOT1A5YKK6 2376 aaKnown RBP11.48□□□□□ -0.57
PBX1-219ENST00000560641 TRAV13-1A0A0B4J241 112 aa11.48□□□□□ -0.57
PBX1-219ENST00000560641 BCE1O60756 84 aa11.48□□□□□ -0.57
PBX1-219ENST00000560641 MRAPQ8TCY5 172 aa11.48□□□□□ -0.57
PBX1-219ENST00000560641 LINC00337Q8N6G1 96 aa11.47□□□□□ -0.57
PBX1-219ENST00000560641 LINC00167Q96N53 147 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms