RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 MIAQ16674 131 aa8.04□□□□□ -1.12
RABGGTA-213ENST00000560127 FER1L6-AS1Q8NA97 138 aa8.04□□□□□ -1.12
RABGGTA-213ENST00000560127 PLAC8Q9NZF1 115 aa8.04□□□□□ -1.12
RABGGTA-213ENST00000560127 IGHV3-64A0A075B6Q5 118 aa8.03□□□□□ -1.12
RABGGTA-213ENST00000560127 SLPIP03973 132 aa8.03□□□□□ -1.12
RABGGTA-213ENST00000560127 RPS20P60866 119 aaKnown RBP8.03□□□□□ -1.12
RABGGTA-213ENST00000560127 UBE2D3P61077 147 aa8.03□□□□□ -1.12
RABGGTA-213ENST00000560127 SSTP61278 116 aa8.03□□□□□ -1.12
RABGGTA-213ENST00000560127 UBE2D2P62837 147 aa8.03□□□□□ -1.12
RABGGTA-213ENST00000560127 PRR3P79522 188 aaKnown RBP8.03□□□□□ -1.12
RABGGTA-213ENST00000560127 LYZL1Q6UWQ5 148 aa8.03□□□□□ -1.12
RABGGTA-213ENST00000560127 LINC01551Q86U37 167 aa8.03□□□□□ -1.12
RABGGTA-213ENST00000560127 CLRN3Q8NCR9 226 aa8.03□□□□□ -1.12
RABGGTA-213ENST00000560127 C7orf33Q8WU49 177 aa8.03□□□□□ -1.12
RABGGTA-213ENST00000560127 SMIM7Q9BQ49 75 aa8.03□□□□□ -1.12
RABGGTA-213ENST00000560127 CNFNQ9BYD5 112 aa8.03□□□□□ -1.12
RABGGTA-213ENST00000560127 RPP21Q9H633 154 aaKnown RBP8.03□□□□□ -1.12
RABGGTA-213ENST00000560127 TRBV6-8A0A0A6YYG3 113 aa8.02□□□□□ -1.13
RABGGTA-213ENST00000560127 FAM231DQ6ZW35 169 aa8.02□□□□□ -1.13
RABGGTA-213ENST00000560127 TPPP3Q9BW30 176 aa8.02□□□□□ -1.13
RABGGTA-213ENST00000560127 PRR34Q9NV39 138 aa8.02□□□□□ -1.13
RABGGTA-213ENST00000560127 TRBV7-3A0A075B6L6 115 aa8.01□□□□□ -1.13
RABGGTA-213ENST00000560127 TRBV10-1A0A0K0K1A3 114 aa8.01□□□□□ -1.13
RABGGTA-213ENST00000560127 RPL36AP83881 106 aaKnown RBP8.01□□□□□ -1.13
RABGGTA-213ENST00000560127 SPANXN1Q5VSR9 72 aa8.01□□□□□ -1.13
RABGGTA-213ENST00000560127 CLPSL2Q6UWE3 100 aa8.01□□□□□ -1.13
RABGGTA-213ENST00000560127 RPL36ALQ969Q0 106 aaKnown RBP8.01□□□□□ -1.13
RABGGTA-213ENST00000560127 hDV102S1A0JD36 115 aa8□□□□□ -1.13
RABGGTA-213ENST00000560127 ZNF727A8MUV8 499 aa8□□□□□ -1.13
RABGGTA-213ENST00000560127 RAB4BP61018 213 aa8□□□□□ -1.13
RABGGTA-213ENST00000560127 RPL23P62829 140 aaKnown RBP8□□□□□ -1.13
RABGGTA-213ENST00000560127 REG3GQ6UW15 175 aa8□□□□□ -1.13
RABGGTA-213ENST00000560127 NEXN-AS1Q8NBZ9 246 aa8□□□□□ -1.13
RABGGTA-213ENST00000560127 OR10G8Q8NGN5 311 aa8□□□□□ -1.13
RABGGTA-213ENST00000560127 AP1S3Q96PC3 154 aa8□□□□□ -1.13
RABGGTA-213ENST00000560127 BIN3Q9NQY0 253 aa8□□□□□ -1.13
RABGGTA-213ENST00000560127 FOXA3P55318 350 aaPredicted RBP7.99□□□□□ -1.13
RABGGTA-213ENST00000560127 ZNF56Q15929 161 aa7.99□□□□□ -1.13
RABGGTA-213ENST00000560127 CT83Q5H943 113 aa7.99□□□□□ -1.13
RABGGTA-213ENST00000560127 SPINK6Q6UWN8 80 aa7.99□□□□□ -1.13
RABGGTA-213ENST00000560127 LINC00269Q8N2A0 174 aa7.99□□□□□ -1.13
RABGGTA-213ENST00000560127 ISOC2Q96AB3 205 aa7.99□□□□□ -1.13
RABGGTA-213ENST00000560127 V9GYV3 84 aa7.99□□□□□ -1.13
RABGGTA-213ENST00000560127 M0QY20 66 aa7.98□□□□□ -1.13
RABGGTA-213ENST00000560127 GATCO43716 136 aaKnown RBP7.98□□□□□ -1.13
RABGGTA-213ENST00000560127 NTF3P20783 257 aa7.98□□□□□ -1.13
RABGGTA-213ENST00000560127 CACNG7P62955 275 aa7.98□□□□□ -1.13
RABGGTA-213ENST00000560127 SUMO4Q6EEV6 95 aa7.98□□□□□ -1.13
RABGGTA-213ENST00000560127 CHCHD5Q9BSY4 110 aa7.98□□□□□ -1.13
RABGGTA-213ENST00000560127 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.97□□□□□ -1.13
RABGGTA-213ENST00000560127 XKRY2A2RUG3 117 aa7.97□□□□□ -1.13
RABGGTA-213ENST00000560127 F2Z2F3 143 aa7.97□□□□□ -1.13
RABGGTA-213ENST00000560127 RBX1P62877 108 aa7.97□□□□□ -1.13
RABGGTA-213ENST00000560127 OSTCQ9NRP0 149 aa7.97□□□□□ -1.13
RABGGTA-213ENST00000560127 AP5S1Q9NUS5 200 aa7.97□□□□□ -1.13
RABGGTA-213ENST00000560127 IGLV10-54A0A075B6I4 117 aa7.96□□□□□ -1.14
RABGGTA-213ENST00000560127 MGPP08493 103 aa7.96□□□□□ -1.14
RABGGTA-213ENST00000560127 PKIAP61925 76 aa7.96□□□□□ -1.14
RABGGTA-213ENST00000560127 SRSF9Q13242 221 aaKnown RBP eCLIP7.96□□□□□ -1.14
RABGGTA-213ENST00000560127 PEA15Q15121 130 aa7.96□□□□□ -1.14
RABGGTA-213ENST00000560127 TMEM241Q24JQ0 296 aa7.96□□□□□ -1.14
RABGGTA-213ENST00000560127 FAM74A3Q4VXF1 159 aa7.96□□□□□ -1.14
RABGGTA-213ENST00000560127 CLLU1Q5K131 121 aa7.96□□□□□ -1.14
RABGGTA-213ENST00000560127 NTM-AS1Q6ZSK4 140 aa7.96□□□□□ -1.14
RABGGTA-213ENST00000560127 PGLYRP4Q96LB8 373 aa7.96□□□□□ -1.14
RABGGTA-213ENST00000560127 NAT8Q9UHE5 227 aa7.96□□□□□ -1.14
RABGGTA-213ENST00000560127 COX6A2Q02221 97 aa7.95□□□□□ -1.14
RABGGTA-213ENST00000560127 ADIRFQ15847 76 aa7.95□□□□□ -1.14
RABGGTA-213ENST00000560127 MAJINQ3KP22 176 aa7.95□□□□□ -1.14
RABGGTA-213ENST00000560127 TSKUQ8WUA8 353 aa7.95□□□□□ -1.14
RABGGTA-213ENST00000560127 SMDT1Q9H4I9 107 aa7.95□□□□□ -1.14
RABGGTA-213ENST00000560127 TRAV26-2A0A0B4J265 109 aa7.94□□□□□ -1.14
RABGGTA-213ENST00000560127 HIGD1CA8MV81 97 aa7.94□□□□□ -1.14
RABGGTA-213ENST00000560127 A8MWL6 223 aa7.94□□□□□ -1.14
RABGGTA-213ENST00000560127 GAGE6Q13070 117 aa7.94□□□□□ -1.14
RABGGTA-213ENST00000560127 TWIST1Q15672 202 aa7.94□□□□□ -1.14
RABGGTA-213ENST00000560127 IGKV2-24A0A0C4DH68 120 aa7.93□□□□□ -1.14
RABGGTA-213ENST00000560127 F5H697 171 aa7.93□□□□□ -1.14
RABGGTA-213ENST00000560127 TRGC1P0CF51 173 aa7.93□□□□□ -1.14
RABGGTA-213ENST00000560127 REG3AQ06141 175 aa7.93□□□□□ -1.14
RABGGTA-213ENST00000560127 STPG4Q8N801 248 aa7.93□□□□□ -1.14
RABGGTA-213ENST00000560127 GATD1Q8NB37 220 aa7.93□□□□□ -1.14
RABGGTA-213ENST00000560127 NUP35Q8NFH5 326 aa7.93□□□□□ -1.14
RABGGTA-213ENST00000560127 PRSS3P2Q8NHM4 247 aa7.93□□□□□ -1.14
RABGGTA-213ENST00000560127 GFRA4Q9GZZ7 299 aa7.93□□□□□ -1.14
RABGGTA-213ENST00000560127 SMIM17P0DL12 118 aa7.92□□□□□ -1.14
RABGGTA-213ENST00000560127 ADCYAP1P18509 176 aa7.92□□□□□ -1.14
RABGGTA-213ENST00000560127 LCE2AQ5TA79 106 aaPredicted RBP7.92□□□□□ -1.14
RABGGTA-213ENST00000560127 A0A0U1RQV1 116 aa7.91□□□□□ -1.14
RABGGTA-213ENST00000560127 SMIM27A0A1W2PRY6 76 aa7.91□□□□□ -1.14
RABGGTA-213ENST00000560127 FAM231BA6NCW3 169 aa7.91□□□□□ -1.14
RABGGTA-213ENST00000560127 RASL11AQ6T310 242 aa7.91□□□□□ -1.14
RABGGTA-213ENST00000560127 C20orf203Q8NBC4 194 aa7.91□□□□□ -1.14
RABGGTA-213ENST00000560127 RPL39LQ96EH5 51 aaKnown RBP7.91□□□□□ -1.14
RABGGTA-213ENST00000560127 TRAV8-4A0A0B4J246 113 aa7.9□□□□□ -1.14
RABGGTA-213ENST00000560127 A0A1B0GUT8 65 aa7.9□□□□□ -1.14
RABGGTA-213ENST00000560127 H7C1H1 209 aa7.9□□□□□ -1.14
RABGGTA-213ENST00000560127 C15orf56Q8N910 161 aa7.9□□□□□ -1.14
RABGGTA-213ENST00000560127 TRBV25-1A0A075B6N4 114 aa7.89□□□□□ -1.15
RABGGTA-213ENST00000560127 RPS10P46783 165 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms