RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 SORL1Q92673 2214 aa1.31□□□□□ -2.2
SPG11-218ENST00000559754 NSD3Q9BZ95 1437 aa1.31□□□□□ -2.2
SPG11-218ENST00000559754 ADGRL2O95490 1459 aa1.31□□□□□ -2.2
SPG11-218ENST00000559754 RAPGEF2Q9Y4G8 1499 aa1.31□□□□□ -2.2
SPG11-218ENST00000559754 TECTAO75443 2155 aa1.3□□□□□ -2.2
SPG11-218ENST00000559754 ASCC3Q8N3C0 2202 aaKnown RBP1.3□□□□□ -2.2
SPG11-218ENST00000559754 SNCAP37840 140 aa1.3□□□□□ -2.2
SPG11-218ENST00000559754 ELOF1P60002 83 aaKnown RBP1.3□□□□□ -2.2
SPG11-218ENST00000559754 KRTAP21-3Q3LHN1 58 aa1.3□□□□□ -2.2
SPG11-218ENST00000559754 C10orf128Q5T292 105 aa1.3□□□□□ -2.2
SPG11-218ENST00000559754 Q86TA4 180 aa1.3□□□□□ -2.2
SPG11-218ENST00000559754 LINC00474Q9P2X8 69 aa1.3□□□□□ -2.2
SPG11-218ENST00000559754 ABCC5O15440 1437 aa1.3□□□□□ -2.2
SPG11-218ENST00000559754 MAGI1Q96QZ7 1491 aaPredicted RBP1.3□□□□□ -2.2
SPG11-218ENST00000559754 LAMC3Q9Y6N6 1575 aa1.3□□□□□ -2.2
SPG11-218ENST00000559754 A0A087WTM6 91 aa1.29□□□□□ -2.2
SPG11-218ENST00000559754 NAP1L6A6NFF2 107 aa1.29□□□□□ -2.2
SPG11-218ENST00000559754 LYNX1P0DP58 116 aa1.29□□□□□ -2.2
SPG11-218ENST00000559754 EDDM3BP56851 147 aa1.29□□□□□ -2.2
SPG11-218ENST00000559754 TMEM14BQ9NUH8 114 aa1.29□□□□□ -2.2
SPG11-218ENST00000559754 V9GYV3 84 aa1.29□□□□□ -2.2
SPG11-218ENST00000559754 FLG2Q5D862 2391 aaPredicted RBP1.29□□□□□ -2.2
SPG11-218ENST00000559754 MACF1Q9UPN3 7388 aaKnown RBP1.29□□□□□ -2.2
SPG11-218ENST00000559754 PI4KAP42356 2102 aa1.28□□□□□ -2.2
SPG11-218ENST00000559754 TRBV7-3A0A075B6L6 115 aa1.28□□□□□ -2.2
SPG11-218ENST00000559754 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.28□□□□□ -2.2
SPG11-218ENST00000559754 KRTDAPP60985 99 aa1.28□□□□□ -2.2
SPG11-218ENST00000559754 GNG11P61952 73 aa1.28□□□□□ -2.2
SPG11-218ENST00000559754 UBA52P62987 128 aaKnown RBP1.28□□□□□ -2.2
SPG11-218ENST00000559754 MGST2Q99735 147 aa1.28□□□□□ -2.2
SPG11-218ENST00000559754 LENEPQ9Y5L5 61 aa1.28□□□□□ -2.2
SPG11-218ENST00000559754 MYOM1P52179 1685 aa1.28□□□□□ -2.2
SPG11-218ENST00000559754 DOCK11Q5JSL3 2073 aa1.28□□□□□ -2.2
SPG11-218ENST00000559754 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.21
SPG11-218ENST00000559754 NOTCH1P46531 2555 aa1.27□□□□□ -2.21
SPG11-218ENST00000559754 FCGBPQ9Y6R7 5405 aaPredicted RBP1.27□□□□□ -2.21
SPG11-218ENST00000559754 BAZ1AQ9NRL2 1556 aaPredicted RBP1.27□□□□□ -2.21
SPG11-218ENST00000559754 PVALEFA0A1B0GWK0 134 aa1.27□□□□□ -2.21
SPG11-218ENST00000559754 A0A1W2PPM0 123 aa1.27□□□□□ -2.21
SPG11-218ENST00000559754 MT-ATP8P03928 68 aa1.27□□□□□ -2.21
SPG11-218ENST00000559754 ANGP03950 147 aaKnown RBP1.27□□□□□ -2.21
SPG11-218ENST00000559754 PRB1P04280 392 aa1.27□□□□□ -2.21
SPG11-218ENST00000559754 SCP2D1Q9UJQ7 156 aa1.27□□□□□ -2.21
SPG11-218ENST00000559754 MUC2Q02817 5179 aa1.27□□□□□ -2.21
SPG11-218ENST00000559754 SBF2Q86WG5 1849 aa1.26□□□□□ -2.21
SPG11-218ENST00000559754 PRDM15P57071 1507 aaPredicted RBP1.26□□□□□ -2.21
SPG11-218ENST00000559754 GOLGA3Q08378 1498 aa1.26□□□□□ -2.21
SPG11-218ENST00000559754 SHANK2Q9UPX8 1470 aa1.26□□□□□ -2.21
SPG11-218ENST00000559754 TSLPQ969D9 159 aa1.26□□□□□ -2.21
SPG11-218ENST00000559754 FAM167A-AS1Q96KT0 104 aa1.26□□□□□ -2.21
SPG11-218ENST00000559754 V9GYS6 101 aa1.26□□□□□ -2.21
SPG11-218ENST00000559754 DIP2CQ9Y2E4 1556 aa1.25□□□□□ -2.21
SPG11-218ENST00000559754 MRC1P22897 1456 aa1.25□□□□□ -2.21
SPG11-218ENST00000559754 KIAA1109Q2LD37 5005 aa1.25□□□□□ -2.21
SPG11-218ENST00000559754 GNGT2O14610 69 aa1.25□□□□□ -2.21
SPG11-218ENST00000559754 PPP1R17O96001 155 aa1.25□□□□□ -2.21
SPG11-218ENST00000559754 Q0VG73 95 aa1.25□□□□□ -2.21
SPG11-218ENST00000559754 SPINK13Q1W4C9 94 aa1.25□□□□□ -2.21
SPG11-218ENST00000559754 Q6ZSA8 131 aa1.25□□□□□ -2.21
SPG11-218ENST00000559754 FAM213BQ8TBF2 198 aa1.25□□□□□ -2.21
SPG11-218ENST00000559754 VAMP8Q9BV40 100 aa1.25□□□□□ -2.21
SPG11-218ENST00000559754 DYNLRB1Q9NP97 96 aa1.25□□□□□ -2.21
SPG11-218ENST00000559754 NDUFA4L2Q9NRX3 87 aa1.25□□□□□ -2.21
SPG11-218ENST00000559754 MED13LQ71F56 2210 aa1.25□□□□□ -2.21
SPG11-218ENST00000559754 MARF1Q9Y4F3 1742 aaKnown RBP1.25□□□□□ -2.21
SPG11-218ENST00000559754 TOP2BQ02880 1626 aa1.25□□□□□ -2.21
SPG11-218ENST00000559754 HMCN1Q96RW7 5635 aa1.24□□□□□ -2.21
SPG11-218ENST00000559754 IFT172Q9UG01 1749 aa1.24□□□□□ -2.21
SPG11-218ENST00000559754 hADV29S1A0JD25 119 aa1.24□□□□□ -2.21
SPG11-218ENST00000559754 CRYM-AS1A6NIL9 109 aa1.24□□□□□ -2.21
SPG11-218ENST00000559754 CCL18P55774 89 aa1.24□□□□□ -2.21
SPG11-218ENST00000559754 WFDC6Q9BQY6 131 aa1.24□□□□□ -2.21
SPG11-218ENST00000559754 Q9H521 79 aa1.24□□□□□ -2.21
SPG11-218ENST00000559754 UQCR10Q9UDW1 63 aa1.24□□□□□ -2.21
SPG11-218ENST00000559754 R4GMQ9 66 aa1.24□□□□□ -2.21
SPG11-218ENST00000559754 RGPD4Q7Z3J3 1758 aa1.24□□□□□ -2.21
SPG11-218ENST00000559754 ANKRD36BQ8N2N9 1353 aa1.23□□□□□ -2.21
SPG11-218ENST00000559754 ARHGEF5Q12774 1597 aa1.23□□□□□ -2.21
SPG11-218ENST00000559754 A0A096LNT2 108 aa1.23□□□□□ -2.21
SPG11-218ENST00000559754 LOC285095A0A1B0GVY8 99 aa1.23□□□□□ -2.21
SPG11-218ENST00000559754 UBE2D3P61077 147 aa1.23□□□□□ -2.21
SPG11-218ENST00000559754 UBE2D2P62837 147 aa1.23□□□□□ -2.21
SPG11-218ENST00000559754 SEC11AP67812 179 aa1.23□□□□□ -2.21
SPG11-218ENST00000559754 SPAG11BQ08648 103 aa1.23□□□□□ -2.21
SPG11-218ENST00000559754 C6orf52Q5T4I8 152 aa1.23□□□□□ -2.21
SPG11-218ENST00000559754 SPAG11AQ6PDA7 123 aa1.23□□□□□ -2.21
SPG11-218ENST00000559754 Q96NJ1 140 aa1.23□□□□□ -2.21
SPG11-218ENST00000559754 PMCHL2Q9BQD1 86 aa1.23□□□□□ -2.21
SPG11-218ENST00000559754 CNTRLQ7Z7A1 2325 aa1.22□□□□□ -2.21
SPG11-218ENST00000559754 LAMA4Q16363 1823 aa1.22□□□□□ -2.21
SPG11-218ENST00000559754 ABCC3O15438 1527 aa1.22□□□□□ -2.21
SPG11-218ENST00000559754 ARHGEF12Q9NZN5 1544 aa1.22□□□□□ -2.21
SPG11-218ENST00000559754 ATOX1O00244 68 aa1.22□□□□□ -2.21
SPG11-218ENST00000559754 NDUFC1O43677 76 aa1.22□□□□□ -2.21
SPG11-218ENST00000559754 ARL14EPLP0DKL9 152 aa1.22□□□□□ -2.21
SPG11-218ENST00000559754 Q5VV11 94 aa1.22□□□□□ -2.21
SPG11-218ENST00000559754 PLAC4Q8WY50 150 aa1.22□□□□□ -2.21
SPG11-218ENST00000559754 MANBALQ9NQG1 85 aa1.22□□□□□ -2.21
SPG11-218ENST00000559754 CDC42SE2Q9NRR3 84 aa1.22□□□□□ -2.21
SPG11-218ENST00000559754 PRO1854Q9UHT4 67 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms