RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 TRAV12-3A0A0B4J271 114 aa4.26□□□□□ -1.73
FOXN3-215ENST00000557261 KNCNA6PVL3 124 aa4.26□□□□□ -1.73
FOXN3-215ENST00000557261 KRTAP29-1A8MX34 341 aaPredicted RBP4.26□□□□□ -1.73
FOXN3-215ENST00000557261 H3BVH4 76 aa4.26□□□□□ -1.73
FOXN3-215ENST00000557261 M0R2Z0 102 aa4.26□□□□□ -1.73
FOXN3-215ENST00000557261 M0R381 172 aa4.26□□□□□ -1.73
FOXN3-215ENST00000557261 NTF3P20783 257 aa4.26□□□□□ -1.73
FOXN3-215ENST00000557261 S100A4P26447 101 aaKnown RBP4.26□□□□□ -1.73
FOXN3-215ENST00000557261 RAB4BP61018 213 aa4.26□□□□□ -1.73
FOXN3-215ENST00000557261 CXCL6P80162 114 aa4.26□□□□□ -1.73
FOXN3-215ENST00000557261 C12orf54Q6X4T0 127 aa4.26□□□□□ -1.73
FOXN3-215ENST00000557261 ORMDL3Q8N138 153 aa4.26□□□□□ -1.73
FOXN3-215ENST00000557261 OR10AG1Q8NH19 301 aa4.26□□□□□ -1.73
FOXN3-215ENST00000557261 C18orf32Q8TCD1 76 aa4.26□□□□□ -1.73
FOXN3-215ENST00000557261 RASL10AQ92737 203 aa4.26□□□□□ -1.73
FOXN3-215ENST00000557261 MRAP2Q96G30 205 aa4.26□□□□□ -1.73
FOXN3-215ENST00000557261 EDA2RQ9HAV5 297 aa4.26□□□□□ -1.73
FOXN3-215ENST00000557261 PHLDA3Q9Y5J5 127 aa4.26□□□□□ -1.73
FOXN3-215ENST00000557261 PRKDCP78527 4128 aaKnown RBP4.25□□□□□ -1.73
FOXN3-215ENST00000557261 K7EMI3 77 aa4.25□□□□□ -1.73
FOXN3-215ENST00000557261 SPINK4O60575 86 aa4.25□□□□□ -1.73
FOXN3-215ENST00000557261 HSBP1O75506 76 aa4.25□□□□□ -1.73
FOXN3-215ENST00000557261 PPP1R17O96001 155 aa4.25□□□□□ -1.73
FOXN3-215ENST00000557261 CD7P09564 240 aa4.25□□□□□ -1.73
FOXN3-215ENST00000557261 SRIP30626 198 aa4.25□□□□□ -1.73
FOXN3-215ENST00000557261 EGFEM1PQ0D2K5 195 aa4.25□□□□□ -1.73
FOXN3-215ENST00000557261 RBMY1FQ15415 496 aaKnown RBP4.25□□□□□ -1.73
FOXN3-215ENST00000557261 SPANXN1Q5VSR9 72 aa4.25□□□□□ -1.73
FOXN3-215ENST00000557261 ZNF705AQ6ZN79 300 aaPredicted RBP4.25□□□□□ -1.73
FOXN3-215ENST00000557261 HIST3H2BBQ8N257 126 aa4.25□□□□□ -1.73
FOXN3-215ENST00000557261 C3orf56Q8N813 242 aa4.25□□□□□ -1.73
FOXN3-215ENST00000557261 CSNK1G2-AS1Q8NCQ2 148 aa4.25□□□□□ -1.73
FOXN3-215ENST00000557261 TMEM263Q8WUH6 116 aaKnown RBP4.25□□□□□ -1.73
FOXN3-215ENST00000557261 CHCHD1Q96BP2 118 aaKnown RBP4.25□□□□□ -1.73
FOXN3-215ENST00000557261 MUC4Q99102 2169 aa4.25□□□□□ -1.73
FOXN3-215ENST00000557261 DPH3P1Q9H4G8 78 aa4.25□□□□□ -1.73
FOXN3-215ENST00000557261 NAGKQ9UJ70 344 aa4.25□□□□□ -1.73
FOXN3-215ENST00000557261 NOTCH1P46531 2555 aa4.24□□□□□ -1.73
FOXN3-215ENST00000557261 TRAV12-2A0A075B6T6 113 aa4.24□□□□□ -1.73
FOXN3-215ENST00000557261 GRIFINA4D1Z8 144 aa4.24□□□□□ -1.73
FOXN3-215ENST00000557261 LINC01546A6NGU7 62 aa4.24□□□□□ -1.73
FOXN3-215ENST00000557261 SMIM6P0DI80 62 aa4.24□□□□□ -1.73
FOXN3-215ENST00000557261 PRB4P10163 310 aaPredicted RBP4.24□□□□□ -1.73
FOXN3-215ENST00000557261 RAB4AP20338 218 aa4.24□□□□□ -1.73
FOXN3-215ENST00000557261 NDUFA6P56556 154 aa4.24□□□□□ -1.73
FOXN3-215ENST00000557261 KRTAP10-11P60412 298 aa4.24□□□□□ -1.73
FOXN3-215ENST00000557261 REG3AQ06141 175 aa4.24□□□□□ -1.73
FOXN3-215ENST00000557261 LGALS9BQ3B8N2 356 aa4.24□□□□□ -1.73
FOXN3-215ENST00000557261 C11orf72Q8NBR9 251 aa4.24□□□□□ -1.73
FOXN3-215ENST00000557261 RNF185Q96GF1 192 aa4.24□□□□□ -1.73
FOXN3-215ENST00000557261 GOLT1BQ9Y3E0 138 aa4.24□□□□□ -1.73
FOXN3-215ENST00000557261 KMT2CQ8NEZ4 4911 aaKnown RBP4.24□□□□□ -1.73
FOXN3-215ENST00000557261 VWFP04275 2813 aa4.23□□□□□ -1.73
FOXN3-215ENST00000557261 SMIM9A6NGZ8 99 aa4.23□□□□□ -1.73
FOXN3-215ENST00000557261 A8MWV9 139 aa4.23□□□□□ -1.73
FOXN3-215ENST00000557261 M0R2P5 195 aa4.23□□□□□ -1.73
FOXN3-215ENST00000557261 IGKV3-20P01619 116 aa4.23□□□□□ -1.73
FOXN3-215ENST00000557261 GIG44P09565 113 aaPredicted RBP4.23□□□□□ -1.73
FOXN3-215ENST00000557261 S100A2P29034 98 aa4.23□□□□□ -1.73
FOXN3-215ENST00000557261 APOC4P55056 127 aa4.23□□□□□ -1.73
FOXN3-215ENST00000557261 DAZ2Q13117 558 aaKnown RBP4.23□□□□□ -1.73
FOXN3-215ENST00000557261 MRPL51Q4U2R6 128 aaKnown RBP4.23□□□□□ -1.73
FOXN3-215ENST00000557261 Q6ZQT7 251 aa4.23□□□□□ -1.73
FOXN3-215ENST00000557261 BAGE3Q86Y29 109 aa4.23□□□□□ -1.73
FOXN3-215ENST00000557261 AMN1Q8IY45 258 aa4.23□□□□□ -1.73
FOXN3-215ENST00000557261 C1orf158Q8N1D5 194 aa4.23□□□□□ -1.73
FOXN3-215ENST00000557261 C16orf74Q96GX8 76 aa4.23□□□□□ -1.73
FOXN3-215ENST00000557261 VSIG2Q96IQ7 327 aa4.23□□□□□ -1.73
FOXN3-215ENST00000557261 C20orf78Q9BR46 151 aa4.23□□□□□ -1.73
FOXN3-215ENST00000557261 KIF25-AS1Q9Y6Z4 181 aa4.23□□□□□ -1.73
FOXN3-215ENST00000557261 RYR3Q15413 4870 aa4.22□□□□□ -1.73
FOXN3-215ENST00000557261 NACAE9PAV3 2078 aa4.22□□□□□ -1.73
FOXN3-215ENST00000557261 TRBV6-5A0A0K0K1A5 114 aa4.22□□□□□ -1.73
FOXN3-215ENST00000557261 LINC01549A6NIU2 74 aa4.22□□□□□ -1.73
FOXN3-215ENST00000557261 D6R8Y8 96 aa4.22□□□□□ -1.73
FOXN3-215ENST00000557261 SMKR1H3BMG3 65 aa4.22□□□□□ -1.73
FOXN3-215ENST00000557261 GNRH2O43555 120 aa4.22□□□□□ -1.73
FOXN3-215ENST00000557261 SERF1AO75920 110 aa4.22□□□□□ -1.73
FOXN3-215ENST00000557261 SMIM17P0DL12 118 aa4.22□□□□□ -1.73
FOXN3-215ENST00000557261 EVI2AP22794 236 aa4.22□□□□□ -1.73
FOXN3-215ENST00000557261 CKS2P33552 79 aa4.22□□□□□ -1.73
FOXN3-215ENST00000557261 LINC00315P59091 139 aa4.22□□□□□ -1.73
FOXN3-215ENST00000557261 COTL1Q14019 142 aa4.22□□□□□ -1.73
FOXN3-215ENST00000557261 ZFP2Q6ZN57 461 aa4.22□□□□□ -1.73
FOXN3-215ENST00000557261 PRELID3AQ96N28 172 aa4.22□□□□□ -1.73
FOXN3-215ENST00000557261 C18orf15Q96N68 181 aa4.22□□□□□ -1.73
FOXN3-215ENST00000557261 LINC01587Q99440 93 aa4.22□□□□□ -1.73
FOXN3-215ENST00000557261 HIST1H2BLQ99880 126 aa4.22□□□□□ -1.73
FOXN3-215ENST00000557261 MAP1LC3AQ9H492 121 aa4.22□□□□□ -1.73
FOXN3-215ENST00000557261 NXT2Q9NPJ8 142 aaKnown RBP4.22□□□□□ -1.73
FOXN3-215ENST00000557261 MDFICQ9P1T7 246 aa4.22□□□□□ -1.73
FOXN3-215ENST00000557261 NBEAL2Q6ZNJ1 2754 aa4.21□□□□□ -1.73
FOXN3-215ENST00000557261 H7C1H1 209 aa4.21□□□□□ -1.74
FOXN3-215ENST00000557261 TCAPO15273 167 aa4.21□□□□□ -1.74
FOXN3-215ENST00000557261 LINC00614P0C842 121 aa4.21□□□□□ -1.74
FOXN3-215ENST00000557261 TMEM208Q9BTX3 173 aa4.21□□□□□ -1.74
FOXN3-215ENST00000557261 XCL2Q9UBD3 114 aa4.21□□□□□ -1.74
FOXN3-215ENST00000557261 NPYP01303 97 aa4.2□□□□□ -1.74
FOXN3-215ENST00000557261 CRYGDP07320 174 aa4.2□□□□□ -1.74
FOXN3-215ENST00000557261 G0S2P27469 103 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms