RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 RAB14P61106 215 aa7.59□□□□□ -1.19
ACTN1-221ENST00000556571 PEA15Q15121 130 aa7.59□□□□□ -1.19
ACTN1-221ENST00000556571 LYZL1Q6UWQ5 148 aa7.59□□□□□ -1.19
ACTN1-221ENST00000556571 CLRN3Q8NCR9 226 aa7.59□□□□□ -1.19
ACTN1-221ENST00000556571 CHCHD5Q9BSY4 110 aa7.59□□□□□ -1.19
ACTN1-221ENST00000556571 TNXBP22105 4242 aa7.58□□□□□ -1.2
ACTN1-221ENST00000556571 GATCO43716 136 aaKnown RBP7.58□□□□□ -1.2
ACTN1-221ENST00000556571 MGPP08493 103 aa7.58□□□□□ -1.2
ACTN1-221ENST00000556571 SRP19P09132 144 aaKnown RBP7.58□□□□□ -1.2
ACTN1-221ENST00000556571 CIRBPQ14011 172 aaKnown RBP7.58□□□□□ -1.2
ACTN1-221ENST00000556571 FAM74A3Q4VXF1 159 aa7.58□□□□□ -1.2
ACTN1-221ENST00000556571 DPH3Q96FX2 82 aa7.58□□□□□ -1.2
ACTN1-221ENST00000556571 DPH3P1Q9H4G8 78 aa7.58□□□□□ -1.2
ACTN1-221ENST00000556571 PRR34Q9NV39 138 aa7.58□□□□□ -1.2
ACTN1-221ENST00000556571 A8MWL6 223 aa7.57□□□□□ -1.2
ACTN1-221ENST00000556571 H7C1H1 209 aa7.57□□□□□ -1.2
ACTN1-221ENST00000556571 CTRLP40313 264 aa7.57□□□□□ -1.2
ACTN1-221ENST00000556571 TWIST1Q15672 202 aa7.57□□□□□ -1.2
ACTN1-221ENST00000556571 TMEM241Q24JQ0 296 aa7.57□□□□□ -1.2
ACTN1-221ENST00000556571 FAM231DQ6ZW35 169 aa7.57□□□□□ -1.2
ACTN1-221ENST00000556571 SMIM15Q7Z3B0 74 aa7.57□□□□□ -1.2
ACTN1-221ENST00000556571 LINC01551Q86U37 167 aa7.57□□□□□ -1.2
ACTN1-221ENST00000556571 NEXN-AS1Q8NBZ9 246 aa7.57□□□□□ -1.2
ACTN1-221ENST00000556571 BORCS7Q96B45 105 aa7.57□□□□□ -1.2
ACTN1-221ENST00000556571 RNF185Q96GF1 192 aa7.57□□□□□ -1.2
ACTN1-221ENST00000556571 SMDT1Q9H4I9 107 aa7.57□□□□□ -1.2
ACTN1-221ENST00000556571 NTF3P20783 257 aa7.56□□□□□ -1.2
ACTN1-221ENST00000556571 CNBPP62633 177 aaKnown RBP7.56□□□□□ -1.2
ACTN1-221ENST00000556571 TMEM97Q5BJF2 176 aa7.56□□□□□ -1.2
ACTN1-221ENST00000556571 WDR73Q6P4I2 378 aa7.56□□□□□ -1.2
ACTN1-221ENST00000556571 KRTAP26-1Q6PEX3 210 aa7.56□□□□□ -1.2
ACTN1-221ENST00000556571 RBX1P62877 108 aa7.55□□□□□ -1.2
ACTN1-221ENST00000556571 CT83Q5H943 113 aa7.55□□□□□ -1.2
ACTN1-221ENST00000556571 LINC00269Q8N2A0 174 aa7.55□□□□□ -1.2
ACTN1-221ENST00000556571 IGHV3-64A0A075B6Q5 118 aa7.54□□□□□ -1.2
ACTN1-221ENST00000556571 A0A087WYN8 130 aa7.54□□□□□ -1.2
ACTN1-221ENST00000556571 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.54□□□□□ -1.2
ACTN1-221ENST00000556571 hDV102S1A0JD36 115 aa7.54□□□□□ -1.2
ACTN1-221ENST00000556571 ADIRFQ15847 76 aa7.54□□□□□ -1.2
ACTN1-221ENST00000556571 CLPSL2Q6UWE3 100 aa7.54□□□□□ -1.2
ACTN1-221ENST00000556571 PGLYRP4Q96LB8 373 aa7.54□□□□□ -1.2
ACTN1-221ENST00000556571 NAT8Q9UHE5 227 aa7.54□□□□□ -1.2
ACTN1-221ENST00000556571 KIF25-AS1Q9Y6Z4 181 aa7.54□□□□□ -1.2
ACTN1-221ENST00000556571 GAGE6Q13070 117 aa7.53□□□□□ -1.2
ACTN1-221ENST00000556571 SUMO4Q6EEV6 95 aa7.53□□□□□ -1.2
ACTN1-221ENST00000556571 NTM-AS1Q6ZSK4 140 aa7.53□□□□□ -1.2
ACTN1-221ENST00000556571 C7orf33Q8WU49 177 aa7.53□□□□□ -1.2
ACTN1-221ENST00000556571 TSKUQ8WUA8 353 aa7.53□□□□□ -1.2
ACTN1-221ENST00000556571 GTSF1Q8WW33 167 aa7.53□□□□□ -1.2
ACTN1-221ENST00000556571 LINC01600Q96MT4 127 aa7.53□□□□□ -1.2
ACTN1-221ENST00000556571 CNFNQ9BYD5 112 aa7.53□□□□□ -1.2
ACTN1-221ENST00000556571 OSTCQ9NRP0 149 aa7.53□□□□□ -1.2
ACTN1-221ENST00000556571 AP5S1Q9NUS5 200 aa7.53□□□□□ -1.2
ACTN1-221ENST00000556571 TRBV25-1A0A075B6N4 114 aa7.52□□□□□ -1.21
ACTN1-221ENST00000556571 TRAV8-4A0A0B4J246 113 aa7.52□□□□□ -1.21
ACTN1-221ENST00000556571 SRSF3P84103 164 aaKnown RBP7.52□□□□□ -1.21
ACTN1-221ENST00000556571 REG3AQ06141 175 aa7.52□□□□□ -1.21
ACTN1-221ENST00000556571 RASL11AQ6T310 242 aa7.52□□□□□ -1.21
ACTN1-221ENST00000556571 SPACA4Q8TDM5 124 aa7.52□□□□□ -1.21
ACTN1-221ENST00000556571 GFRA4Q9GZZ7 299 aa7.52□□□□□ -1.21
ACTN1-221ENST00000556571 PLAC8Q9NZF1 115 aa7.52□□□□□ -1.21
ACTN1-221ENST00000556571 IGLV10-54A0A075B6I4 117 aa7.51□□□□□ -1.21
ACTN1-221ENST00000556571 FAM231BA6NCW3 169 aa7.51□□□□□ -1.21
ACTN1-221ENST00000556571 HIGD1CA8MV81 97 aa7.51□□□□□ -1.21
ACTN1-221ENST00000556571 C9JQL5 133 aa7.51□□□□□ -1.21
ACTN1-221ENST00000556571 M0QY20 66 aa7.51□□□□□ -1.21
ACTN1-221ENST00000556571 PHOX2AO14813 284 aa7.51□□□□□ -1.21
ACTN1-221ENST00000556571 CHTF8P0CG12 524 aa7.51□□□□□ -1.21
ACTN1-221ENST00000556571 RPL23P62829 140 aaKnown RBP7.51□□□□□ -1.21
ACTN1-221ENST00000556571 ISOC2Q96AB3 205 aa7.51□□□□□ -1.21
ACTN1-221ENST00000556571 A0A1B0GUT8 65 aa7.5□□□□□ -1.21
ACTN1-221ENST00000556571 SLPIP03973 132 aa7.5□□□□□ -1.21
ACTN1-221ENST00000556571 FOXA3P55318 350 aaPredicted RBP7.5□□□□□ -1.21
ACTN1-221ENST00000556571 IQCJQ1A5X6 159 aa7.5□□□□□ -1.21
ACTN1-221ENST00000556571 NIT2Q9NQR4 276 aa7.5□□□□□ -1.21
ACTN1-221ENST00000556571 IGHV1-24A0A0C4DH33 117 aa7.49□□□□□ -1.21
ACTN1-221ENST00000556571 NAT8BQ9UHF3 227 aa7.49□□□□□ -1.21
ACTN1-221ENST00000556571 V9GYV3 84 aa7.49□□□□□ -1.21
ACTN1-221ENST00000556571 RIGQ13278 110 aa7.48□□□□□ -1.21
ACTN1-221ENST00000556571 CLLU1Q5K131 121 aa7.48□□□□□ -1.21
ACTN1-221ENST00000556571 C20orf203Q8NBC4 194 aa7.48□□□□□ -1.21
ACTN1-221ENST00000556571 TRAV26-2A0A0B4J265 109 aa7.47□□□□□ -1.21
ACTN1-221ENST00000556571 A0A0J9YXV3 536 aa7.47□□□□□ -1.21
ACTN1-221ENST00000556571 A0A1B0GUV1 79 aa7.47□□□□□ -1.21
ACTN1-221ENST00000556571 PRR3P79522 188 aaKnown RBP7.47□□□□□ -1.21
ACTN1-221ENST00000556571 GATD1Q8NB37 220 aa7.47□□□□□ -1.21
ACTN1-221ENST00000556571 NUP35Q8NFH5 326 aa7.47□□□□□ -1.21
ACTN1-221ENST00000556571 KRTAP10-8P60410 259 aa7.46□□□□□ -1.22
ACTN1-221ENST00000556571 COX6A2Q02221 97 aa7.46□□□□□ -1.22
ACTN1-221ENST00000556571 COTL1Q14019 142 aa7.46□□□□□ -1.22
ACTN1-221ENST00000556571 ODF1Q14990 250 aa7.46□□□□□ -1.22
ACTN1-221ENST00000556571 CFAP161Q6P656 301 aa7.46□□□□□ -1.22
ACTN1-221ENST00000556571 IGLV4-60A0A075B6I1 120 aa7.45□□□□□ -1.22
ACTN1-221ENST00000556571 SMIM27A0A1W2PRY6 76 aa7.45□□□□□ -1.22
ACTN1-221ENST00000556571 UBE2L6O14933 153 aa7.45□□□□□ -1.22
ACTN1-221ENST00000556571 PPP1R2P9O14990 202 aa7.45□□□□□ -1.22
ACTN1-221ENST00000556571 RPS10P46783 165 aaKnown RBP7.45□□□□□ -1.22
ACTN1-221ENST00000556571 AMTP48728 403 aa7.45□□□□□ -1.22
ACTN1-221ENST00000556571 PNRC1Q12796 327 aaPredicted RBP7.45□□□□□ -1.22
ACTN1-221ENST00000556571 MAJINQ3KP22 176 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms