RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 PRR3P79522 188 aaKnown RBP2.68□□□□□ -1.98
PRPF39-209ENST00000556353 C9orf153Q5TBE3 101 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 ZNF322Q6U7Q0 402 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-209ENST00000556353 TRAPPC6BQ86SZ2 158 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 ZFP41Q8N8Y5 198 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 OR9G1Q8NH87 305 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 RNF185Q96GF1 192 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 KCNS1Q96KK3 526 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 RNF126Q9BV68 326 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 AGPAT4-IT1Q9H0P7 198 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 GABARAPL1Q9H0R8 117 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 ZNF286AQ9HBT8 521 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 C21orf62Q9NYP8 219 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 CALYQ9NYX4 217 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 ANAPC10Q9UM13 185 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 HILPDAQ9Y5L2 63 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 R4GMQ9 66 aa2.68□□□□□ -1.98
PRPF39-209ENST00000556353 A0A096LNJ9 63 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 LOC107986453A0A1B0GWG9 222 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 A8MWV9 139 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 LGALS9O00182 355 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 IGKV1-17P01599 117 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 RBP4P02753 201 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 LINC00869P0C866 280 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 SLC25A6P12236 298 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 HLA-DMBP28068 263 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 SDC2P34741 201 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 VDAC2P45880 294 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-209ENST00000556353 DYNLT3P51808 116 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 ERCC8Q13216 396 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 ZNF345Q14585 488 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 CDK5R1Q15078 307 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 FAM222AQ5U5X8 452 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 C12orf73Q69YU5 71 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 KTN1-AS1Q86SY8 53 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 NDUFA11Q86Y39 141 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 WFDC9Q8NEX5 89 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 OR11H7Q8NGC8 314 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 OR2T35Q8NGX2 323 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 OR2T10Q8NGZ9 312 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 S100A16Q96FQ6 103 aaKnown RBP2.67□□□□□ -1.98
PRPF39-209ENST00000556353 ZNF714Q96N38 554 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 SPACA5Q96QH8 159 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 AK3Q9UIJ7 227 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 LINC00527Q9UJ94 153 aa2.67□□□□□ -1.98
PRPF39-209ENST00000556353 IGKV1D-8A0A087WSZ0 117 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 TRAV8-3A0A0A6YYJ7 113 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 TRAV13-1A0A0B4J241 112 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 TMEM235A6NFC5 223 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 H3BP45 60 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 UBE2L6O14933 153 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 AGPAT2O15120 278 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 PSPHP1O15172 72 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 PLA2G10O15496 165 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 LYRM1O43325 122 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 IGHV3-7P01780 117 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 TRACP01848 142 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 SLC25A5P05141 298 aaKnown RBP2.66□□□□□ -1.98
PRPF39-209ENST00000556353 SFTA3P0C7M3 94 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 CGB3P0DN86 165 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 CGB7P0DN87 165 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 FABP2P12104 132 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 CXCL5P42830 114 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 HINT1P49773 126 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-209ENST00000556353 EDDM3BP56851 147 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 MRPS36P82909 103 aaKnown RBP2.66□□□□□ -1.98
PRPF39-209ENST00000556353 PMCHL1Q16048 86 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 ABCA11PQ4W5N1 156 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 BVES-AS1Q5T3Y7 98 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 SLC25A34Q6PIV7 304 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 IGFL1Q6UW32 110 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 DPPA3Q6W0C5 159 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 LINC00305Q7Z4B0 112 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 ATP5L2Q7Z4Y8 100 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 LINC00311Q8N616 119 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 DRAM1Q8N682 238 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 RNF182Q8N6D2 247 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 LEAP2Q969E1 77 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 PMCHL2Q9BQD1 86 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 GABARAPL3Q9BY60 117 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 NDUFB11Q9NX14 153 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 SERP1Q9Y6X1 66 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 V9GYH0 126 aa2.66□□□□□ -1.98
PRPF39-209ENST00000556353 DNAH5Q8TE73 4624 aa2.65□□□□□ -1.98
PRPF39-209ENST00000556353 HSPG2P98160 4391 aa2.65□□□□□ -1.98
PRPF39-209ENST00000556353 A0A1W2PPM0 123 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 H3BMG7 143 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 BUB1B-PAK6H3BSN5 160 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 SSSCA1O60232 199 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 SNCGO76070 127 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 CST7O76096 145 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 RBMY1CP0DJD4 496 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 HLA-DRB4P13762 266 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 IL3RAP26951 378 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 INSL3P51460 131 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 CACNG7P62955 275 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 ELOBQ15370 118 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 DEFB136Q30KP8 78 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 LGALS9BQ3B8N2 356 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 SPATA45Q537H7 98 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms