RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 TMEM262E9PQX1 116 aa4.19□□□□□ -1.74
TMEM260-209ENST00000556079 M0QY20 66 aa4.19□□□□□ -1.74
TMEM260-209ENST00000556079 PDE6DO43924 150 aa4.19□□□□□ -1.74
TMEM260-209ENST00000556079 NTF3P20783 257 aa4.19□□□□□ -1.74
TMEM260-209ENST00000556079 GCSHP23434 173 aa4.19□□□□□ -1.74
TMEM260-209ENST00000556079 CTRLP40313 264 aa4.19□□□□□ -1.74
TMEM260-209ENST00000556079 ATRAIDQ6UW56 229 aa4.19□□□□□ -1.74
TMEM260-209ENST00000556079 RPL39LQ96EH5 51 aaKnown RBP4.19□□□□□ -1.74
TMEM260-209ENST00000556079 DAZAP1Q96EP5 407 aaKnown RBP4.19□□□□□ -1.74
TMEM260-209ENST00000556079 PGLYRP4Q96LB8 373 aa4.19□□□□□ -1.74
TMEM260-209ENST00000556079 CHCHD5Q9BSY4 110 aa4.19□□□□□ -1.74
TMEM260-209ENST00000556079 C1orf43Q9BWL3 253 aa4.19□□□□□ -1.74
TMEM260-209ENST00000556079 KRTAP9-3Q9BYQ3 159 aa4.19□□□□□ -1.74
TMEM260-209ENST00000556079 RPP21Q9H633 154 aaKnown RBP4.19□□□□□ -1.74
TMEM260-209ENST00000556079 TRBV10-1A0A0K0K1A3 114 aa4.18□□□□□ -1.74
TMEM260-209ENST00000556079 SRP19P09132 144 aaKnown RBP4.18□□□□□ -1.74
TMEM260-209ENST00000556079 RBX1P62877 108 aa4.18□□□□□ -1.74
TMEM260-209ENST00000556079 GATD1Q8NB37 220 aa4.18□□□□□ -1.74
TMEM260-209ENST00000556079 LYPD6BQ8NI32 183 aa4.18□□□□□ -1.74
TMEM260-209ENST00000556079 IGLV4-60A0A075B6I1 120 aa4.17□□□□□ -1.74
TMEM260-209ENST00000556079 IGLV10-54A0A075B6I4 117 aa4.17□□□□□ -1.74
TMEM260-209ENST00000556079 A0A087WWC5 75 aa4.17□□□□□ -1.74
TMEM260-209ENST00000556079 A0A087WX48 190 aa4.17□□□□□ -1.74
TMEM260-209ENST00000556079 SMKR1H3BMG3 65 aa4.17□□□□□ -1.74
TMEM260-209ENST00000556079 GATCO43716 136 aaKnown RBP4.17□□□□□ -1.74
TMEM260-209ENST00000556079 HLA-DQA1P01909 254 aa4.17□□□□□ -1.74
TMEM260-209ENST00000556079 ANGP03950 147 aaKnown RBP4.17□□□□□ -1.74
TMEM260-209ENST00000556079 SMIM17P0DL12 118 aa4.17□□□□□ -1.74
TMEM260-209ENST00000556079 RPS20P60866 119 aaKnown RBP4.17□□□□□ -1.74
TMEM260-209ENST00000556079 CACNG7P62955 275 aa4.17□□□□□ -1.74
TMEM260-209ENST00000556079 BLOC1S1P78537 153 aa4.17□□□□□ -1.74
TMEM260-209ENST00000556079 LAGE3Q14657 143 aa4.17□□□□□ -1.74
TMEM260-209ENST00000556079 TWIST1Q15672 202 aa4.17□□□□□ -1.74
TMEM260-209ENST00000556079 KRTAP26-1Q6PEX3 210 aa4.17□□□□□ -1.74
TMEM260-209ENST00000556079 FRZBQ92765 325 aa4.17□□□□□ -1.74
TMEM260-209ENST00000556079 EIF5A2Q9GZV4 153 aaKnown RBP4.17□□□□□ -1.74
TMEM260-209ENST00000556079 RNF213Q63HN8 5207 aa4.17□□□□□ -1.74
TMEM260-209ENST00000556079 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.16□□□□□ -1.74
TMEM260-209ENST00000556079 IGKV2-29A2NJV5 120 aaPredicted RBP4.16□□□□□ -1.74
TMEM260-209ENST00000556079 NCR2O95944 276 aa4.16□□□□□ -1.74
TMEM260-209ENST00000556079 RASL11AQ6T310 242 aa4.16□□□□□ -1.74
TMEM260-209ENST00000556079 LINC01551Q86U37 167 aa4.16□□□□□ -1.74
TMEM260-209ENST00000556079 LINC00269Q8N2A0 174 aa4.16□□□□□ -1.74
TMEM260-209ENST00000556079 C20orf203Q8NBC4 194 aa4.16□□□□□ -1.74
TMEM260-209ENST00000556079 FAM210AQ96ND0 272 aa4.16□□□□□ -1.74
TMEM260-209ENST00000556079 SMIM7Q9BQ49 75 aa4.16□□□□□ -1.74
TMEM260-209ENST00000556079 DPH3P1Q9H4G8 78 aa4.16□□□□□ -1.74
TMEM260-209ENST00000556079 URGCP-MRPS24S4R325 110 aa4.16□□□□□ -1.74
TMEM260-209ENST00000556079 TRAV8-3A0A0A6YYJ7 113 aa4.15□□□□□ -1.75
TMEM260-209ENST00000556079 IGKV3OR2-268A0A0C4DH90 116 aa4.15□□□□□ -1.75
TMEM260-209ENST00000556079 USP17L23D6RBM5 183 aa4.15□□□□□ -1.75
TMEM260-209ENST00000556079 TMEM250H0YL14 139 aa4.15□□□□□ -1.75
TMEM260-209ENST00000556079 PANO1I0J062 215 aa4.15□□□□□ -1.75
TMEM260-209ENST00000556079 K7EP13 123 aa4.15□□□□□ -1.75
TMEM260-209ENST00000556079 PRSS1P07477 247 aa4.15□□□□□ -1.75
TMEM260-209ENST00000556079 RPS10P46783 165 aaKnown RBP4.15□□□□□ -1.75
TMEM260-209ENST00000556079 SMIM12Q96EX1 92 aa4.15□□□□□ -1.75
TMEM260-209ENST00000556079 RNF185Q96GF1 192 aa4.15□□□□□ -1.75
TMEM260-209ENST00000556079 TM2D2Q9BX73 214 aa4.15□□□□□ -1.75
TMEM260-209ENST00000556079 CNFNQ9BYD5 112 aa4.15□□□□□ -1.75
TMEM260-209ENST00000556079 TRBV25-1A0A075B6N4 114 aa4.14□□□□□ -1.75
TMEM260-209ENST00000556079 IGHV1-24A0A0C4DH33 117 aa4.14□□□□□ -1.75
TMEM260-209ENST00000556079 ZNF727A8MUV8 499 aa4.14□□□□□ -1.75
TMEM260-209ENST00000556079 F2Z2F3 143 aa4.14□□□□□ -1.75
TMEM260-209ENST00000556079 CRPP02741 224 aa4.14□□□□□ -1.75
TMEM260-209ENST00000556079 TRGC1P0CF51 173 aa4.14□□□□□ -1.75
TMEM260-209ENST00000556079 RPL23P62829 140 aaKnown RBP4.14□□□□□ -1.75
TMEM260-209ENST00000556079 IQCJQ1A5X6 159 aa4.14□□□□□ -1.75
TMEM260-209ENST00000556079 FAM231DQ6ZW35 169 aa4.14□□□□□ -1.75
TMEM260-209ENST00000556079 SCXQ7RTU7 201 aa4.14□□□□□ -1.75
TMEM260-209ENST00000556079 ISOC2Q96AB3 205 aa4.14□□□□□ -1.75
TMEM260-209ENST00000556079 TMEM243Q9BU79 118 aa4.14□□□□□ -1.75
TMEM260-209ENST00000556079 NIT2Q9NQR4 276 aa4.14□□□□□ -1.75
TMEM260-209ENST00000556079 TMEM242Q9NWH2 141 aa4.14□□□□□ -1.75
TMEM260-209ENST00000556079 V9GYV3 84 aa4.14□□□□□ -1.75
TMEM260-209ENST00000556079 LRP2P98164 4655 aa4.13□□□□□ -1.75
TMEM260-209ENST00000556079 XKRY2A2RUG3 117 aa4.13□□□□□ -1.75
TMEM260-209ENST00000556079 HIGD1CA8MV81 97 aa4.13□□□□□ -1.75
TMEM260-209ENST00000556079 TSHBP01222 138 aa4.13□□□□□ -1.75
TMEM260-209ENST00000556079 TAGLN2P37802 199 aaKnown RBP4.13□□□□□ -1.75
TMEM260-209ENST00000556079 AMTP48728 403 aa4.13□□□□□ -1.75
TMEM260-209ENST00000556079 REG3AQ06141 175 aa4.13□□□□□ -1.75
TMEM260-209ENST00000556079 ADIRFQ15847 76 aa4.13□□□□□ -1.75
TMEM260-209ENST00000556079 Q6ZSA8 131 aa4.13□□□□□ -1.75
TMEM260-209ENST00000556079 AMN1Q8IY45 258 aa4.13□□□□□ -1.75
TMEM260-209ENST00000556079 CHCHD7Q9BUK0 85 aa4.13□□□□□ -1.75
TMEM260-209ENST00000556079 BIN3Q9NQY0 253 aa4.13□□□□□ -1.75
TMEM260-209ENST00000556079 PRR34Q9NV39 138 aa4.13□□□□□ -1.75
TMEM260-209ENST00000556079 FAM231BA6NCW3 169 aa4.12□□□□□ -1.75
TMEM260-209ENST00000556079 SDHAF1A6NFY7 115 aa4.12□□□□□ -1.75
TMEM260-209ENST00000556079 H7C1H1 209 aa4.12□□□□□ -1.75
TMEM260-209ENST00000556079 SLPIP03973 132 aa4.12□□□□□ -1.75
TMEM260-209ENST00000556079 RNASE13Q5GAN3 156 aaKnown RBP4.12□□□□□ -1.75
TMEM260-209ENST00000556079 WDR73Q6P4I2 378 aa4.12□□□□□ -1.75
TMEM260-209ENST00000556079 KCNIP4Q6PIL6 250 aa4.12□□□□□ -1.75
TMEM260-209ENST00000556079 TEX261Q6UWH6 196 aa4.12□□□□□ -1.75
TMEM260-209ENST00000556079 NUP35Q8NFH5 326 aa4.12□□□□□ -1.75
TMEM260-209ENST00000556079 TSKUQ8WUA8 353 aa4.12□□□□□ -1.75
TMEM260-209ENST00000556079 RMI2Q96E14 147 aa4.12□□□□□ -1.75
TMEM260-209ENST00000556079 TMEM70Q9BUB7 260 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms