RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 ZNF256Q9Y2P7 627 aaPredicted RBP7.9□□□□□ -1.14
MTHFD1-210ENST00000555252 MYO18BQ8IUG5 2567 aa7.9□□□□□ -1.14
MTHFD1-210ENST00000555252 IGLV4-3A0A075B6K6 122 aa7.9□□□□□ -1.15
MTHFD1-210ENST00000555252 H7C2G1 150 aa7.9□□□□□ -1.15
MTHFD1-210ENST00000555252 IGHV3-30-3P0DP02 117 aa7.9□□□□□ -1.15
MTHFD1-210ENST00000555252 DCANP1Q8TF63 244 aa7.9□□□□□ -1.15
MTHFD1-210ENST00000555252 TIMM21Q9BVV7 248 aa7.9□□□□□ -1.15
MTHFD1-210ENST00000555252 IGHV1-58A0A0C4DH39 117 aa7.89□□□□□ -1.15
MTHFD1-210ENST00000555252 F6UB75 175 aa7.89□□□□□ -1.15
MTHFD1-210ENST00000555252 ELANEP08246 267 aa7.89□□□□□ -1.15
MTHFD1-210ENST00000555252 MIAQ16674 131 aa7.89□□□□□ -1.15
MTHFD1-210ENST00000555252 DEFB112Q30KQ8 113 aa7.89□□□□□ -1.15
MTHFD1-210ENST00000555252 USP9XQ93008 2570 aaPredicted RBP7.89□□□□□ -1.15
MTHFD1-210ENST00000555252 SPTBN1Q01082 2364 aaKnown RBP7.88□□□□□ -1.15
MTHFD1-210ENST00000555252 IGKV3-7A0A075B6H7 116 aa7.88□□□□□ -1.15
MTHFD1-210ENST00000555252 A0A087WWL8 130 aa7.88□□□□□ -1.15
MTHFD1-210ENST00000555252 IGHV3-16A0A0C4DH30 117 aa7.88□□□□□ -1.15
MTHFD1-210ENST00000555252 IGHV4-59P01825 116 aa7.88□□□□□ -1.15
MTHFD1-210ENST00000555252 TMEM101Q96IK0 257 aa7.88□□□□□ -1.15
MTHFD1-210ENST00000555252 ABCA2Q9BZC7 2435 aa7.88□□□□□ -1.15
MTHFD1-210ENST00000555252 DEFB1P60022 68 aa7.88□□□□□ -1.15
MTHFD1-210ENST00000555252 SNRPD3P62318 126 aaKnown RBP7.88□□□□□ -1.15
MTHFD1-210ENST00000555252 ZNF56Q15929 161 aa7.88□□□□□ -1.15
MTHFD1-210ENST00000555252 JPT2Q9H910 190 aa7.88□□□□□ -1.15
MTHFD1-210ENST00000555252 A0A0J9YXV3 536 aa7.87□□□□□ -1.15
MTHFD1-210ENST00000555252 ATP5G1P05496 136 aa7.87□□□□□ -1.15
MTHFD1-210ENST00000555252 A0A096LNT2 108 aa7.87□□□□□ -1.15
MTHFD1-210ENST00000555252 MEIG1Q5JSS6 88 aa7.87□□□□□ -1.15
MTHFD1-210ENST00000555252 SMIM20Q8N5G0 67 aa7.87□□□□□ -1.15
MTHFD1-210ENST00000555252 MED13LQ71F56 2210 aa7.86□□□□□ -1.15
MTHFD1-210ENST00000555252 TINCRA0A1B0GVN0 87 aa7.86□□□□□ -1.15
MTHFD1-210ENST00000555252 HERV-K104P63124 156 aa7.86□□□□□ -1.15
MTHFD1-210ENST00000555252 TMEM61Q8N0U2 210 aa7.86□□□□□ -1.15
MTHFD1-210ENST00000555252 RNF152Q8N8N0 203 aa7.86□□□□□ -1.15
MTHFD1-210ENST00000555252 BEX4Q9NWD9 120 aaPredicted RBP7.86□□□□□ -1.15
MTHFD1-210ENST00000555252 SPTAN1Q13813 2472 aaKnown RBP7.86□□□□□ -1.15
MTHFD1-210ENST00000555252 K7EQG2 157 aa7.85□□□□□ -1.15
MTHFD1-210ENST00000555252 TMEM95Q3KNT9 176 aa7.85□□□□□ -1.15
MTHFD1-210ENST00000555252 FAM74A4Q5TZK3 123 aa7.85□□□□□ -1.15
MTHFD1-210ENST00000555252 COPS9Q8WXC6 57 aa7.85□□□□□ -1.15
MTHFD1-210ENST00000555252 NDUFA12Q9UI09 145 aa7.85□□□□□ -1.15
MTHFD1-210ENST00000555252 VPREB3Q9UKI3 123 aa7.85□□□□□ -1.15
MTHFD1-210ENST00000555252 UTP20O75691 2785 aaKnown RBP7.85□□□□□ -1.15
MTHFD1-210ENST00000555252 UBR5O95071 2799 aaPredicted RBP7.85□□□□□ -1.15
MTHFD1-210ENST00000555252 TRGV11A0A075B6L2 103 aa7.85□□□□□ -1.15
MTHFD1-210ENST00000555252 VSIG2Q96IQ7 327 aa7.85□□□□□ -1.15
MTHFD1-210ENST00000555252 OPRPNQ99935 248 aaPredicted RBP7.85□□□□□ -1.15
MTHFD1-210ENST00000555252 TRAV12-3A0A0B4J271 114 aa7.84□□□□□ -1.15
MTHFD1-210ENST00000555252 FSHBP01225 129 aa7.84□□□□□ -1.15
MTHFD1-210ENST00000555252 CD28P10747 220 aa7.84□□□□□ -1.15
MTHFD1-210ENST00000555252 Q6YL49 198 aa7.84□□□□□ -1.15
MTHFD1-210ENST00000555252 UBE2E2Q96LR5 201 aa7.84□□□□□ -1.15
MTHFD1-210ENST00000555252 TNFRSF18Q9Y5U5 241 aa7.84□□□□□ -1.15
MTHFD1-210ENST00000555252 IGHV3-64A0A075B6Q5 118 aa7.83□□□□□ -1.16
MTHFD1-210ENST00000555252 IGHV1OR15-1A0A075B7D0 117 aa7.83□□□□□ -1.16
MTHFD1-210ENST00000555252 PRSS2P07478 247 aa7.83□□□□□ -1.16
MTHFD1-210ENST00000555252 DOPEY1Q5JWR5 2465 aa7.83□□□□□ -1.16
MTHFD1-210ENST00000555252 SPXQ9BT56 116 aa7.83□□□□□ -1.16
MTHFD1-210ENST00000555252 PPDPFQ9H3Y8 114 aa7.83□□□□□ -1.16
MTHFD1-210ENST00000555252 LRRK2Q5S007 2527 aa7.83□□□□□ -1.16
MTHFD1-210ENST00000555252 EDN2P20800 178 aa7.83□□□□□ -1.16
MTHFD1-210ENST00000555252 PIK3CD-AS1Q5SR53 167 aa7.83□□□□□ -1.16
MTHFD1-210ENST00000555252 SHISA2Q6UWI4 295 aa7.82□□□□□ -1.16
MTHFD1-210ENST00000555252 LINC00643Q86TS7 51 aa7.82□□□□□ -1.16
MTHFD1-210ENST00000555252 NRGNQ92686 78 aa7.82□□□□□ -1.16
MTHFD1-210ENST00000555252 LINC01587Q99440 93 aa7.82□□□□□ -1.16
MTHFD1-210ENST00000555252 CXCL5P42830 114 aa7.82□□□□□ -1.16
MTHFD1-210ENST00000555252 ADAMTSL4-AS1Q5T5F5 129 aa7.82□□□□□ -1.16
MTHFD1-210ENST00000555252 SDIM1Q6ZPB5 146 aa7.82□□□□□ -1.16
MTHFD1-210ENST00000555252 ZNF702PQ9H963 129 aa7.82□□□□□ -1.16
MTHFD1-210ENST00000555252 NDUFA1O15239 70 aa7.81□□□□□ -1.16
MTHFD1-210ENST00000555252 SYNJ2BPP57105 145 aa7.81□□□□□ -1.16
MTHFD1-210ENST00000555252 CIRBPQ14011 172 aaKnown RBP7.81□□□□□ -1.16
MTHFD1-210ENST00000555252 CLEC2BQ92478 149 aa7.81□□□□□ -1.16
MTHFD1-210ENST00000555252 FAM104AQ969W3 186 aa7.81□□□□□ -1.16
MTHFD1-210ENST00000555252 TENM4Q6N022 2769 aa7.81□□□□□ -1.16
MTHFD1-210ENST00000555252 COX7A2LO14548 114 aa7.8□□□□□ -1.16
MTHFD1-210ENST00000555252 IGHV4-31P0DP07 118 aa7.8□□□□□ -1.16
MTHFD1-210ENST00000555252 TIRAPP58753 221 aa7.8□□□□□ -1.16
MTHFD1-210ENST00000555252 C10orf99Q6UWK7 81 aa7.8□□□□□ -1.16
MTHFD1-210ENST00000555252 LRRC75A-AS1Q8N1F1 130 aa7.8□□□□□ -1.16
MTHFD1-210ENST00000555252 DUX3Q96PT4 197 aa7.8□□□□□ -1.16
MTHFD1-210ENST00000555252 GCN1Q92616 2671 aaKnown RBP7.8□□□□□ -1.16
MTHFD1-210ENST00000555252 HELZ2Q9BYK8 2649 aaKnown RBP7.8□□□□□ -1.16
MTHFD1-210ENST00000555252 IGLV5-45A0A087WSX0 123 aa7.8□□□□□ -1.16
MTHFD1-210ENST00000555252 TRAV8-3A0A0A6YYJ7 113 aa7.8□□□□□ -1.16
MTHFD1-210ENST00000555252 UQCRQO14949 82 aa7.8□□□□□ -1.16
MTHFD1-210ENST00000555252 TRACP01848 142 aa7.8□□□□□ -1.16
MTHFD1-210ENST00000555252 PLA2G2AP14555 144 aa7.8□□□□□ -1.16
MTHFD1-210ENST00000555252 HOXD3P31249 432 aaPredicted RBP7.8□□□□□ -1.16
MTHFD1-210ENST00000555252 DEFB104AQ8WTQ1 72 aa7.8□□□□□ -1.16
MTHFD1-210ENST00000555252 FASNP49327 2511 aaKnown RBP7.8□□□□□ -1.16
MTHFD1-210ENST00000555252 CHCHD5Q9BSY4 110 aa7.79□□□□□ -1.16
MTHFD1-210ENST00000555252 FAM222AQ5U5X8 452 aa7.79□□□□□ -1.16
MTHFD1-210ENST00000555252 Q8N2B8 174 aa7.79□□□□□ -1.16
MTHFD1-210ENST00000555252 C3orf22Q8N5N4 141 aa7.79□□□□□ -1.16
MTHFD1-210ENST00000555252 DAND5Q8N907 189 aa7.79□□□□□ -1.16
MTHFD1-210ENST00000555252 PEMTQ9UBM1 199 aa7.79□□□□□ -1.16
MTHFD1-210ENST00000555252 UBE2D4Q9Y2X8 147 aa7.79□□□□□ -1.16
MTHFD1-210ENST00000555252 FAM236AA0A1B0GUQ0 79 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms