RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 IGHV3-7P01780 117 aa3.17□□□□□ -1.9
FOXN3-206ENST00000554005 SAA2P0DJI9 122 aaPredicted RBP3.17□□□□□ -1.9
FOXN3-206ENST00000554005 HLA-DMBP28068 263 aa3.17□□□□□ -1.9
FOXN3-206ENST00000554005 UBE2AP49459 152 aa3.17□□□□□ -1.9
FOXN3-206ENST00000554005 TAS2R45P59539 299 aa3.17□□□□□ -1.9
FOXN3-206ENST00000554005 RPL30P62888 115 aaKnown RBP3.17□□□□□ -1.9
FOXN3-206ENST00000554005 SUPT4H1P63272 117 aaKnown RBP3.17□□□□□ -1.9
FOXN3-206ENST00000554005 ZNF816Q0VGE8 651 aaPredicted RBP3.17□□□□□ -1.9
FOXN3-206ENST00000554005 LYRM7Q5U5X0 104 aa3.17□□□□□ -1.9
FOXN3-206ENST00000554005 C2orf91Q6ZV80 131 aa3.17□□□□□ -1.9
FOXN3-206ENST00000554005 PCP2Q8IVA1 136 aa3.17□□□□□ -1.9
FOXN3-206ENST00000554005 C3orf56Q8N813 242 aa3.17□□□□□ -1.9
FOXN3-206ENST00000554005 FAM19A4Q96LR4 140 aa3.17□□□□□ -1.9
FOXN3-206ENST00000554005 NABP2Q9BQ15 211 aa3.17□□□□□ -1.9
FOXN3-206ENST00000554005 NAA60Q9H7X0 242 aa3.17□□□□□ -1.9
FOXN3-206ENST00000554005 MED13LQ71F56 2210 aa3.17□□□□□ -1.9
FOXN3-206ENST00000554005 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.16□□□□□ -1.9
FOXN3-206ENST00000554005 FLNAP21333 2647 aaKnown RBP3.16□□□□□ -1.9
FOXN3-206ENST00000554005 KIAA2026Q5HYC2 2103 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 VPS13CQ709C8 3753 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 TRAV4A0A0B4J268 109 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 TRAV40A0A0B4J280 105 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 TEX50A0A1B0GTY4 177 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 IZUMO1RA6ND01 250 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 ATP5G1P05496 136 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 ZNF688P0C7X2 276 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 CBLN1P23435 193 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 DYNLT3P51808 116 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 PRB3Q04118 309 aaPredicted RBP3.16□□□□□ -1.9
FOXN3-206ENST00000554005 RTL8BQ17RB0 113 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 VMA21Q3ZAQ7 101 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 Q56UQ5 140 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 RPL39P5Q59GN2 51 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 RPL7L1Q6DKI1 246 aaKnown RBP3.16□□□□□ -1.9
FOXN3-206ENST00000554005 DAZ4Q86SG3 579 aaKnown RBP3.16□□□□□ -1.9
FOXN3-206ENST00000554005 PDPNQ86YL7 162 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 ANKRD29Q8N6D5 301 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 IGF2BP2-AS1Q96M15 143 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 TMEM147Q9BVK8 224 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 MRPL20Q9BYC9 149 aaKnown RBP3.16□□□□□ -1.9
FOXN3-206ENST00000554005 NMES1Q9C002 83 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 AGPAT4-IT1Q9H0P7 198 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 DAZ1Q9NQZ3 744 aaKnown RBP3.16□□□□□ -1.9
FOXN3-206ENST00000554005 OTORQ9NRC9 128 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 ZNRD1Q9P1U0 126 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 KLK5Q9Y337 293 aaPredicted RBP3.16□□□□□ -1.9
FOXN3-206ENST00000554005 TRAPPC1Q9Y5R8 145 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 HIVEP1P15822 2718 aa3.16□□□□□ -1.9
FOXN3-206ENST00000554005 NSD1Q96L73 2696 aaPredicted RBP3.16□□□□□ -1.9
FOXN3-206ENST00000554005 DOCK11Q5JSL3 2073 aa3.15□□□□□ -1.9
FOXN3-206ENST00000554005 TRAV9-1A0A075B6T8 112 aa3.15□□□□□ -1.91
FOXN3-206ENST00000554005 IGHV1-3A0A0C4DH29 117 aa3.15□□□□□ -1.91
FOXN3-206ENST00000554005 TRBV7-7A0A0K0K1E9 115 aa3.15□□□□□ -1.91
FOXN3-206ENST00000554005 RBAKDNA6NC62 111 aa3.15□□□□□ -1.91
FOXN3-206ENST00000554005 F6UB75 175 aa3.15□□□□□ -1.91
FOXN3-206ENST00000554005 ZNF493Q6ZR52 646 aa3.15□□□□□ -1.91
FOXN3-206ENST00000554005 LSM10Q969L4 123 aaKnown RBP3.15□□□□□ -1.91
FOXN3-206ENST00000554005 RAB37Q96AX2 223 aa3.15□□□□□ -1.91
FOXN3-206ENST00000554005 EEF1AKMT3Q96AZ1 226 aa3.15□□□□□ -1.91
FOXN3-206ENST00000554005 RNF5Q99942 180 aa3.15□□□□□ -1.91
FOXN3-206ENST00000554005 SHANK2-AS3Q9BTD1 123 aa3.15□□□□□ -1.91
FOXN3-206ENST00000554005 LAMTOR3Q9UHA4 124 aa3.15□□□□□ -1.91
FOXN3-206ENST00000554005 CR1P17927 2039 aa3.15□□□□□ -1.91
FOXN3-206ENST00000554005 F8P00451 2351 aa3.15□□□□□ -1.91
FOXN3-206ENST00000554005 ABCA1O95477 2261 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 CSPG4Q6UVK1 2322 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 NF1P21359 2839 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 TRAV12-2A0A075B6T6 113 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 TRAV13-1A0A0B4J241 112 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 A8MWL6 223 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 NDUFC2-KCTD14E9PQ53 114 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 ZNF324O75467 553 aaPredicted RBP3.14□□□□□ -1.91
FOXN3-206ENST00000554005 IGKV1-39P01597 117 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 IGKV1-5P01602 117 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 TRACP01848 142 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 IGKV1-16P04430 117 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 IGKV1D-39P04432 117 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 SMIM13P0DJ93 91 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 PYYP10082 97 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 COX8AP10176 69 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 COX7CP15954 63 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 ZNF726P1Q15940 193 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 DEFB116Q30KQ4 102 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 KRTAP21-3Q3LHN1 58 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 BRD3OSQ6XYD6 125 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 BPIFA4PQ86YQ2 179 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 PRR15Q8IV56 129 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 SBSPONQ8IVN8 264 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 DYNAPQ8N1N2 210 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 Q8N6K4 173 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 MYOZ3Q8TDC0 251 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 RBMXL1Q96E39 390 aaKnown RBP3.14□□□□□ -1.91
FOXN3-206ENST00000554005 KCNS1Q96KK3 526 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 IMUPQ9GZP8 106 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 RBM12B-AS1Q9P1G2 102 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 HILPDAQ9Y5L2 63 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 ARHGAP32A7KAX9 2087 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 WNK2Q9Y3S1 2297 aa3.14□□□□□ -1.91
FOXN3-206ENST00000554005 TRBV19A0A075B6N1 114 aa3.13□□□□□ -1.91
FOXN3-206ENST00000554005 IGHV3-72A0A0B4J1Y9 119 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms