RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 UBE2D2P62837 147 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 PMCHL1Q16048 86 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 PYY3Q5JQD4 70 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 CFAP126Q5VTH2 177 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 Q5VV11 94 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 LINC00575Q6W349 94 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 Q6ZSA8 131 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 PLAC4Q8WY50 150 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 S100A16Q96FQ6 103 aaKnown RBP0.89□□□□□ -2.27
SRP54-204ENST00000553923 WFDC6Q9BQY6 131 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 C20orf78Q9BR46 151 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 BPESC1Q9GZL8 116 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 AKAP11Q9UKA4 1901 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 KDM6BO15054 1643 aa0.89□□□□□ -2.27
SRP54-204ENST00000553923 PHRF1Q9P1Y6 1649 aaKnown RBP0.89□□□□□ -2.27
SRP54-204ENST00000553923 PLXNA4Q9HCM2 1894 aa0.88□□□□□ -2.27
SRP54-204ENST00000553923 CCDC18Q5T9S5 1454 aa0.88□□□□□ -2.27
SRP54-204ENST00000553923 MAGI1Q96QZ7 1491 aaPredicted RBP0.88□□□□□ -2.27
SRP54-204ENST00000553923 TRBV7-7A0A0K0K1E9 115 aa0.88□□□□□ -2.27
SRP54-204ENST00000553923 ZNF815PA8K554 130 aa0.88□□□□□ -2.27
SRP54-204ENST00000553923 TMEM14DPA8MWL7 114 aa0.88□□□□□ -2.27
SRP54-204ENST00000553923 SYS1-DBNDD2H3BUS1 97 aa0.88□□□□□ -2.27
SRP54-204ENST00000553923 PSMG4Q5JS54 123 aa0.88□□□□□ -2.27
SRP54-204ENST00000553923 BAGE2Q86Y30 109 aa0.88□□□□□ -2.27
SRP54-204ENST00000553923 FAM223AQ8IWN6 122 aa0.88□□□□□ -2.27
SRP54-204ENST00000553923 Q96NJ1 140 aa0.88□□□□□ -2.27
SRP54-204ENST00000553923 CDC42SE2Q9NRR3 84 aa0.88□□□□□ -2.27
SRP54-204ENST00000553923 MYO9BQ13459 2157 aa0.88□□□□□ -2.27
SRP54-204ENST00000553923 E9PCH4 1651 aa0.88□□□□□ -2.27
SRP54-204ENST00000553923 PTPRDP23468 1912 aa0.87□□□□□ -2.27
SRP54-204ENST00000553923 SHANK2Q9UPX8 1470 aa0.87□□□□□ -2.27
SRP54-204ENST00000553923 MUC6Q6W4X9 2439 aa0.87□□□□□ -2.27
SRP54-204ENST00000553923 TNS1Q9HBL0 1735 aaKnown RBP0.87□□□□□ -2.27
SRP54-204ENST00000553923 NWD2Q9ULI1 1742 aa0.87□□□□□ -2.27
SRP54-204ENST00000553923 A0A1B0GWA3 101 aa0.87□□□□□ -2.27
SRP54-204ENST00000553923 FAM223BA6NKX1 122 aa0.87□□□□□ -2.27
SRP54-204ENST00000553923 UQCR11O14957 56 aa0.87□□□□□ -2.27
SRP54-204ENST00000553923 NMBP08949 121 aa0.87□□□□□ -2.27
SRP54-204ENST00000553923 GCHFRP30047 84 aa0.87□□□□□ -2.27
SRP54-204ENST00000553923 SPINT3P49223 89 aa0.87□□□□□ -2.27
SRP54-204ENST00000553923 ZNF137PP52743 207 aa0.87□□□□□ -2.27
SRP54-204ENST00000553923 SPINK13Q1W4C9 94 aa0.87□□□□□ -2.27
SRP54-204ENST00000553923 ZNF720Q7Z2F6 126 aa0.87□□□□□ -2.27
SRP54-204ENST00000553923 SMIM4Q8WVI0 70 aa0.87□□□□□ -2.27
SRP54-204ENST00000553923 S100A13Q99584 98 aa0.87□□□□□ -2.27
SRP54-204ENST00000553923 HEATR1Q9H583 2144 aaKnown RBP0.87□□□□□ -2.27
SRP54-204ENST00000553923 MUC4Q99102 2169 aa0.87□□□□□ -2.27
SRP54-204ENST00000553923 DIDO1Q9BTC0 2240 aaKnown RBP0.87□□□□□ -2.27
SRP54-204ENST00000553923 MLH3Q9UHC1 1453 aa0.86□□□□□ -2.27
SRP54-204ENST00000553923 CR1P17927 2039 aa0.86□□□□□ -2.27
SRP54-204ENST00000553923 AKAP12Q02952 1782 aa0.86□□□□□ -2.27
SRP54-204ENST00000553923 DOCK10Q96BY6 2186 aa0.86□□□□□ -2.27
SRP54-204ENST00000553923 BRWD1Q9NSI6 2320 aa0.86□□□□□ -2.27
SRP54-204ENST00000553923 H3BQF6 201 aa0.86□□□□□ -2.27
SRP54-204ENST00000553923 SMIM11AP58511 58 aa0.86□□□□□ -2.27
SRP54-204ENST00000553923 C10orf99Q6UWK7 81 aa0.86□□□□□ -2.27
SRP54-204ENST00000553923 VMO1Q7Z5L0 202 aa0.86□□□□□ -2.27
SRP54-204ENST00000553923 FDCSPQ8NFU4 85 aa0.86□□□□□ -2.27
SRP54-204ENST00000553923 LCN9Q8WX39 176 aa0.86□□□□□ -2.27
SRP54-204ENST00000553923 PRR15LQ9BU68 103 aa0.86□□□□□ -2.27
SRP54-204ENST00000553923 LINC01558Q9Y6Z2 57 aa0.86□□□□□ -2.27
SRP54-204ENST00000553923 TNRC6BQ9UPQ9 1833 aaKnown RBP0.86□□□□□ -2.27
SRP54-204ENST00000553923 TROQ12816 1431 aaPredicted RBP0.86□□□□□ -2.27
SRP54-204ENST00000553923 EDC4Q6P2E9 1401 aaKnown RBP0.86□□□□□ -2.27
SRP54-204ENST00000553923 MCM3APO60318 1980 aa0.86□□□□□ -2.27
SRP54-204ENST00000553923 PCDH15Q96QU1 1955 aa0.86□□□□□ -2.27
SRP54-204ENST00000553923 NRXN2Q9P2S2 1712 aa0.86□□□□□ -2.27
SRP54-204ENST00000553923 ALPK2Q86TB3 2170 aa0.86□□□□□ -2.27
SRP54-204ENST00000553923 LRRC37A3O60309 1634 aa0.86□□□□□ -2.27
SRP54-204ENST00000553923 BAHCC1Q9P281 2608 aa0.85□□□□□ -2.27
SRP54-204ENST00000553923 LAMB1P07942 1786 aa0.85□□□□□ -2.27
SRP54-204ENST00000553923 DLEC1Q9Y238 1755 aa0.85□□□□□ -2.27
SRP54-204ENST00000553923 MDC1Q14676 2089 aaKnown RBP0.85□□□□□ -2.27
SRP54-204ENST00000553923 MYOFQ9NZM1 2061 aa0.85□□□□□ -2.27
SRP54-204ENST00000553923 FN1P02751 2386 aaKnown RBP0.85□□□□□ -2.27
SRP54-204ENST00000553923 PRDM15P57071 1507 aaPredicted RBP0.85□□□□□ -2.27
SRP54-204ENST00000553923 COL4A1P02462 1669 aa0.85□□□□□ -2.27
SRP54-204ENST00000553923 MYH9P35579 1960 aaKnown RBP0.85□□□□□ -2.27
SRP54-204ENST00000553923 TNRC6AQ8NDV7 1962 aaKnown RBP0.85□□□□□ -2.27
SRP54-204ENST00000553923 TRBV25-1A0A075B6N4 114 aa0.85□□□□□ -2.27
SRP54-204ENST00000553923 C7orf77A4D0Y5 90 aa0.85□□□□□ -2.27
SRP54-204ENST00000553923 H7BZZ5 65 aa0.85□□□□□ -2.27
SRP54-204ENST00000553923 PLXNA2O75051 1894 aa0.85□□□□□ -2.27
SRP54-204ENST00000553923 ANGP03950 147 aaKnown RBP0.85□□□□□ -2.27
SRP54-204ENST00000553923 MGPP08493 103 aa0.85□□□□□ -2.27
SRP54-204ENST00000553923 SAA2P0DJI9 122 aaPredicted RBP0.85□□□□□ -2.27
SRP54-204ENST00000553923 HAMPP81172 84 aa0.85□□□□□ -2.27
SRP54-204ENST00000553923 COX17Q14061 63 aa0.85□□□□□ -2.27
SRP54-204ENST00000553923 ADIRFQ15847 76 aa0.85□□□□□ -2.27
SRP54-204ENST00000553923 TDRG1Q3Y452 100 aa0.85□□□□□ -2.27
SRP54-204ENST00000553923 ETDBQ3ZM63 59 aa0.85□□□□□ -2.27
SRP54-204ENST00000553923 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.85□□□□□ -2.27
SRP54-204ENST00000553923 Q6ZRX8 168 aa0.85□□□□□ -2.27
SRP54-204ENST00000553923 SMIM11BQ8TCY0 68 aa0.85□□□□□ -2.27
SRP54-204ENST00000553923 HIGD1BQ9P298 99 aa0.85□□□□□ -2.27
SRP54-204ENST00000553923 SPCS1Q9Y6A9 102 aa0.85□□□□□ -2.27
SRP54-204ENST00000553923 SCRIBQ14160 1630 aa0.85□□□□□ -2.27
SRP54-204ENST00000553923 KDM5AP29375 1690 aaKnown RBP0.84□□□□□ -2.27
SRP54-204ENST00000553923 ZNF142P52746 1687 aaPredicted RBP0.84□□□□□ -2.27
SRP54-204ENST00000553923 LAMC3Q9Y6N6 1575 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms