RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 RPL30P62888 115 aaKnown RBP1.19□□□□□ -2.22
VRK1-202ENST00000553683 IQGAP2Q13576 1575 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 NUP210LQ5VU65 1888 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 DCHS2Q6V1P9 2916 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 SMIM5Q71RC9 77 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 DAND5Q8N907 189 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 TRGV9Q99603 122 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 MGST2Q99735 147 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 NPCDR1Q9BY65 106 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 MYO5CQ9NQX4 1742 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 TENM1Q9UKZ4 2725 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 C2orf16Q68DN1 1984 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 SLIT1O75093 1534 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 NFAT5O94916 1531 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 CACNA1HO95180 2353 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 ADGRG4Q8IZF6 3080 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 EPPK1P58107 5090 aaKnown RBP1.19□□□□□ -2.22
VRK1-202ENST00000553683 KMT2CQ8NEZ4 4911 aaKnown RBP1.19□□□□□ -2.22
VRK1-202ENST00000553683 ALPK3Q96L96 1907 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 A0A1B0GUL6 1792 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 COL18A1P39060 1754 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 IQGAP3Q86VI3 1631 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 CENPEQ02224 2701 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 CHD3Q12873 2000 aaKnown RBP1.18□□□□□ -2.22
VRK1-202ENST00000553683 LRRC37A2A6NM11 1700 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 KNDC1Q76NI1 1749 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 TNRC6AQ8NDV7 1962 aaKnown RBP1.18□□□□□ -2.22
VRK1-202ENST00000553683 LTBP2Q14767 1821 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 IGKV1-6A0A0C4DH72 117 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 TCRBV4S1A1TA0A5B7 111 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 C19orf71A6NCJ1 209 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 GNRH2O43555 120 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 HCRTO43612 131 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 BCE1O60756 84 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 CPSF4O95639 269 aaKnown RBP1.18□□□□□ -2.22
VRK1-202ENST00000553683 IGKV1-39P01597 117 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 IGKV1D-39P04432 117 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 CGB3P0DN86 165 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 CGB7P0DN87 165 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 KRTAP12-1P59990 96 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 SNRPFP62306 86 aaKnown RBP1.18□□□□□ -2.22
VRK1-202ENST00000553683 BSPH1Q075Z2 132 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 ASB16-AS1Q495Z4 193 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 C12orf73Q69YU5 71 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 LINC00643Q86TS7 51 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 SLC50A1Q9BRV3 221 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 CST11Q9H112 138 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 NXT2Q9NPJ8 142 aaKnown RBP1.18□□□□□ -2.22
VRK1-202ENST00000553683 MRPL35Q9NZE8 188 aaKnown RBP1.18□□□□□ -2.22
VRK1-202ENST00000553683 TAC3Q9UHF0 121 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 IGF2RP11717 2491 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 PRRC2CQ9Y520 2896 aaKnown RBP1.18□□□□□ -2.22
VRK1-202ENST00000553683 VWA8A3KMH1 1905 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 PIK3C2BO00750 1634 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 TLN2Q9Y4G6 2542 aa1.18□□□□□ -2.22
VRK1-202ENST00000553683 SSC5DA1L4H1 1573 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 MAP2P11137 1827 aaKnown RBP1.17□□□□□ -2.22
VRK1-202ENST00000553683 COL11A1P12107 1806 aaPredicted RBP1.17□□□□□ -2.22
VRK1-202ENST00000553683 OTOGQ6ZRI0 2925 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 COL14A1Q05707 1796 aaKnown RBP1.17□□□□□ -2.22
VRK1-202ENST00000553683 TRAV13-2A0A0B4J235 113 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 LOC285095A0A1B0GVY8 99 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 B4DSR2 109 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 FXYD1O00168 92 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 LEPROTO15243 131 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 PRB1P04280 392 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 ACYP1P07311 99 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 PIRTP0C851 137 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 S100A4P26447 101 aaKnown RBP1.17□□□□□ -2.22
VRK1-202ENST00000553683 TSPEAR-AS2P59090 65 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 UBE2D3P61077 147 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 PCBD1P61457 104 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 UBE2D2P62837 147 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 RBM3P98179 157 aaKnown RBP1.17□□□□□ -2.22
VRK1-202ENST00000553683 CIRBPQ14011 172 aaKnown RBP1.17□□□□□ -2.22
VRK1-202ENST00000553683 RHOHQ15669 191 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 PSMG4Q5JS54 123 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.17□□□□□ -2.22
VRK1-202ENST00000553683 RPL7L1Q6DKI1 246 aaKnown RBP1.17□□□□□ -2.22
VRK1-202ENST00000553683 NOXRED1Q6NXP6 359 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 SOSTDC1Q6X4U4 206 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 TOMM5Q8N4H5 51 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 ZFAND2AQ8N6M9 145 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 FAM216BQ8N7L0 139 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 SPTSSAQ969W0 71 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 ZNF714Q96N38 554 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 BPESC1Q9GZL8 116 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 C11orf1Q9H5F2 150 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 OSTCQ9NRP0 149 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 TAS2R4Q9NYW5 299 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 HILPDAQ9Y5L2 63 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 TRAPPC1Q9Y5R8 145 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 BRCA1P38398 1863 aaKnown RBP1.17□□□□□ -2.22
VRK1-202ENST00000553683 CDK5RAP2Q96SN8 1893 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 AKAP13Q12802 2813 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 SCN10AQ9Y5Y9 1956 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 TJP1Q07157 1748 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 PARP4Q9UKK3 1724 aaKnown RBP1.17□□□□□ -2.22
VRK1-202ENST00000553683 MYO9BQ13459 2157 aa1.17□□□□□ -2.22
VRK1-202ENST00000553683 MYH7BA7E2Y1 1941 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms