RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 IGLV4-60A0A075B6I1 120 aa7.96□□□□□ -1.14
SIX1-202ENST00000553535 IGLV10-54A0A075B6I4 117 aa7.96□□□□□ -1.14
SIX1-202ENST00000553535 TRAV8-4A0A0B4J246 113 aa7.96□□□□□ -1.14
SIX1-202ENST00000553535 P01737 135 aa7.96□□□□□ -1.14
SIX1-202ENST00000553535 RAB5CP51148 216 aa7.96□□□□□ -1.14
SIX1-202ENST00000553535 HNRNPA3P51991 378 aaKnown RBP7.96□□□□□ -1.14
SIX1-202ENST00000553535 NKX2-5P52952 324 aaPredicted RBP7.96□□□□□ -1.14
SIX1-202ENST00000553535 RASL11AQ6T310 242 aa7.96□□□□□ -1.14
SIX1-202ENST00000553535 UBR4Q5T4S7 5183 aa7.95□□□□□ -1.14
SIX1-202ENST00000553535 TRBV20OR9-2A0A075B6H5 130 aa7.95□□□□□ -1.14
SIX1-202ENST00000553535 GNG4P50150 75 aa7.95□□□□□ -1.14
SIX1-202ENST00000553535 CNBPP62633 177 aaKnown RBP7.95□□□□□ -1.14
SIX1-202ENST00000553535 LYZL1Q6UWQ5 148 aa7.95□□□□□ -1.14
SIX1-202ENST00000553535 PGLYRP4Q96LB8 373 aa7.95□□□□□ -1.14
SIX1-202ENST00000553535 TMEM243Q9BU79 118 aa7.95□□□□□ -1.14
SIX1-202ENST00000553535 GFRA4Q9GZZ7 299 aa7.95□□□□□ -1.14
SIX1-202ENST00000553535 NIT2Q9NQR4 276 aa7.95□□□□□ -1.14
SIX1-202ENST00000553535 XKRY2A2RUG3 117 aa7.94□□□□□ -1.14
SIX1-202ENST00000553535 TRGC1P0CF51 173 aa7.94□□□□□ -1.14
SIX1-202ENST00000553535 NTF3P20783 257 aa7.94□□□□□ -1.14
SIX1-202ENST00000553535 SULT1A2P50226 295 aa7.94□□□□□ -1.14
SIX1-202ENST00000553535 MEF2BQ02080 365 aaPredicted RBP7.94□□□□□ -1.14
SIX1-202ENST00000553535 CIRBPQ14011 172 aaKnown RBP7.94□□□□□ -1.14
SIX1-202ENST00000553535 WDR73Q6P4I2 378 aa7.94□□□□□ -1.14
SIX1-202ENST00000553535 C9orf62Q8N4C0 152 aa7.94□□□□□ -1.14
SIX1-202ENST00000553535 DPH3P1Q9H4G8 78 aa7.94□□□□□ -1.14
SIX1-202ENST00000553535 TEX46H3BTG2 121 aa7.93□□□□□ -1.14
SIX1-202ENST00000553535 PDE6DO43924 150 aa7.93□□□□□ -1.14
SIX1-202ENST00000553535 IFNA1P01562 189 aa7.93□□□□□ -1.14
SIX1-202ENST00000553535 SLPIP03973 132 aa7.93□□□□□ -1.14
SIX1-202ENST00000553535 EIF5AL1Q6IS14 154 aaKnown RBP7.93□□□□□ -1.14
SIX1-202ENST00000553535 MED9Q9NWA0 146 aa7.93□□□□□ -1.14
SIX1-202ENST00000553535 hDV102S1A0JD36 115 aa7.93□□□□□ -1.14
SIX1-202ENST00000553535 NUDT10Q8NFP7 164 aa7.93□□□□□ -1.14
SIX1-202ENST00000553535 NUDT11Q96G61 164 aa7.93□□□□□ -1.14
SIX1-202ENST00000553535 BIN3Q9NQY0 253 aa7.93□□□□□ -1.14
SIX1-202ENST00000553535 A6NJY4 79 aa7.92□□□□□ -1.14
SIX1-202ENST00000553535 CTRLP40313 264 aa7.92□□□□□ -1.14
SIX1-202ENST00000553535 CNFNQ9BYD5 112 aa7.92□□□□□ -1.14
SIX1-202ENST00000553535 BCL2P10415 239 aa7.91□□□□□ -1.14
SIX1-202ENST00000553535 COTL1Q14019 142 aa7.91□□□□□ -1.14
SIX1-202ENST00000553535 IGHV3-64A0A075B6Q5 118 aa7.9□□□□□ -1.14
SIX1-202ENST00000553535 GATD1Q8NB37 220 aa7.9□□□□□ -1.14
SIX1-202ENST00000553535 AP5S1Q9NUS5 200 aa7.9□□□□□ -1.14
SIX1-202ENST00000553535 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.89□□□□□ -1.15
SIX1-202ENST00000553535 UBE2L6O14933 153 aa7.89□□□□□ -1.15
SIX1-202ENST00000553535 AMTP48728 403 aa7.89□□□□□ -1.15
SIX1-202ENST00000553535 TWIST1Q15672 202 aa7.89□□□□□ -1.15
SIX1-202ENST00000553535 OCC1Q8TAD7 63 aa7.89□□□□□ -1.15
SIX1-202ENST00000553535 RNF185Q96GF1 192 aa7.89□□□□□ -1.15
SIX1-202ENST00000553535 A0A087WYN8 130 aa7.88□□□□□ -1.15
SIX1-202ENST00000553535 K7EN84 100 aa7.88□□□□□ -1.15
SIX1-202ENST00000553535 CHTF8P0CG12 524 aa7.88□□□□□ -1.15
SIX1-202ENST00000553535 MT1HL1P0DM35 61 aa7.88□□□□□ -1.15
SIX1-202ENST00000553535 C15orf56Q8N910 161 aa7.88□□□□□ -1.15
SIX1-202ENST00000553535 RNASE7Q9H1E1 156 aaKnown RBP7.88□□□□□ -1.15
SIX1-202ENST00000553535 PLA2G2DQ9UNK4 145 aa7.88□□□□□ -1.15
SIX1-202ENST00000553535 TRAV26-2A0A0B4J265 109 aa7.88□□□□□ -1.15
SIX1-202ENST00000553535 GAGE12HA6NDE8 117 aa7.88□□□□□ -1.15
SIX1-202ENST00000553535 Q6ZRU5 148 aa7.88□□□□□ -1.15
SIX1-202ENST00000553535 SPACA4Q8TDM5 124 aa7.88□□□□□ -1.15
SIX1-202ENST00000553535 DPH3Q96FX2 82 aa7.88□□□□□ -1.15
SIX1-202ENST00000553535 RPP21Q9H633 154 aaKnown RBP7.88□□□□□ -1.15
SIX1-202ENST00000553535 TAGLN2P37802 199 aaKnown RBP7.87□□□□□ -1.15
SIX1-202ENST00000553535 CFAP161Q6P656 301 aa7.87□□□□□ -1.15
SIX1-202ENST00000553535 SLC51BQ86UW2 128 aa7.87□□□□□ -1.15
SIX1-202ENST00000553535 TCTE3Q8IZS6 198 aa7.87□□□□□ -1.15
SIX1-202ENST00000553535 GTSF1Q8WW33 167 aa7.87□□□□□ -1.15
SIX1-202ENST00000553535 TNXBP22105 4242 aa7.87□□□□□ -1.15
SIX1-202ENST00000553535 NCR2O95944 276 aa7.86□□□□□ -1.15
SIX1-202ENST00000553535 FOXA3P55318 350 aaPredicted RBP7.86□□□□□ -1.15
SIX1-202ENST00000553535 Q6ZNX1 250 aa7.86□□□□□ -1.15
SIX1-202ENST00000553535 RPL39LQ96EH5 51 aaKnown RBP7.86□□□□□ -1.15
SIX1-202ENST00000553535 KRTAP4-11Q9BYQ6 195 aa7.86□□□□□ -1.15
SIX1-202ENST00000553535 PLAC8Q9NZF1 115 aa7.86□□□□□ -1.15
SIX1-202ENST00000553535 IGKV3OR2-268A0A0C4DH90 116 aa7.85□□□□□ -1.15
SIX1-202ENST00000553535 RPS10P46783 165 aaKnown RBP7.85□□□□□ -1.15
SIX1-202ENST00000553535 H7C423 109 aa7.84□□□□□ -1.15
SIX1-202ENST00000553535 COX6A2Q02221 97 aa7.84□□□□□ -1.15
SIX1-202ENST00000553535 AMMECR1LQ6DCA0 310 aa7.84□□□□□ -1.15
SIX1-202ENST00000553535 CHCHD10Q8WYQ3 142 aaPredicted RBP7.84□□□□□ -1.15
SIX1-202ENST00000553535 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.84□□□□□ -1.15
SIX1-202ENST00000553535 IGKV2-29A2NJV5 120 aaPredicted RBP7.84□□□□□ -1.15
SIX1-202ENST00000553535 FAM231BA6NCW3 169 aa7.84□□□□□ -1.15
SIX1-202ENST00000553535 SDHAF1A6NFY7 115 aa7.84□□□□□ -1.15
SIX1-202ENST00000553535 HIGD2BQ4VC39 106 aa7.84□□□□□ -1.15
SIX1-202ENST00000553535 TEX261Q6UWH6 196 aa7.84□□□□□ -1.15
SIX1-202ENST00000553535 SMIM15Q7Z3B0 74 aa7.84□□□□□ -1.15
SIX1-202ENST00000553535 PRSS3P2Q8NHM4 247 aa7.84□□□□□ -1.15
SIX1-202ENST00000553535 NDUFS6O75380 124 aaKnown RBP7.83□□□□□ -1.16
SIX1-202ENST00000553535 APCSP02743 223 aa7.83□□□□□ -1.16
SIX1-202ENST00000553535 FGF6P10767 208 aa7.83□□□□□ -1.16
SIX1-202ENST00000553535 RNASEKQ6P5S7 137 aaKnown RBP7.83□□□□□ -1.16
SIX1-202ENST00000553535 GVQW2A0A096LPI5 108 aaPredicted RBP7.82□□□□□ -1.16
SIX1-202ENST00000553535 TRBV6-5A0A0K0K1A5 114 aa7.82□□□□□ -1.16
SIX1-202ENST00000553535 TMEM250H0YL14 139 aa7.82□□□□□ -1.16
SIX1-202ENST00000553535 PHOX2AO14813 284 aa7.82□□□□□ -1.16
SIX1-202ENST00000553535 GATCO43716 136 aaKnown RBP7.82□□□□□ -1.16
SIX1-202ENST00000553535 FOXI1Q12951 378 aa7.82□□□□□ -1.16
SIX1-202ENST00000553535 FAM231DQ6ZW35 169 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms