RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 RAB5CP51148 216 aa6.39□□□□□ -1.39
ACTN1-208ENST00000553370 KRTAP10-4P60372 401 aaPredicted RBP6.39□□□□□ -1.39
ACTN1-208ENST00000553370 KRTAP19-4Q3LI73 84 aa6.39□□□□□ -1.39
ACTN1-208ENST00000553370 C9orf163Q8N9P6 203 aa6.39□□□□□ -1.39
ACTN1-208ENST00000553370 TMEM243Q9BU79 118 aa6.39□□□□□ -1.39
ACTN1-208ENST00000553370 KRTAP9-2Q9BYQ4 174 aa6.39□□□□□ -1.39
ACTN1-208ENST00000553370 VAX2Q9UIW0 290 aa6.39□□□□□ -1.39
ACTN1-208ENST00000553370 TRAV8-4A0A0B4J246 113 aa6.38□□□□□ -1.39
ACTN1-208ENST00000553370 XKRY2A2RUG3 117 aa6.38□□□□□ -1.39
ACTN1-208ENST00000553370 P01737 135 aa6.38□□□□□ -1.39
ACTN1-208ENST00000553370 RPL35P42766 123 aaKnown RBP6.38□□□□□ -1.39
ACTN1-208ENST00000553370 NKX2-5P52952 324 aaPredicted RBP6.38□□□□□ -1.39
ACTN1-208ENST00000553370 RPS20P60866 119 aaKnown RBP6.38□□□□□ -1.39
ACTN1-208ENST00000553370 EIF5AP63241 154 aaKnown RBP6.38□□□□□ -1.39
ACTN1-208ENST00000553370 FER1L6-AS1Q8NA97 138 aa6.38□□□□□ -1.39
ACTN1-208ENST00000553370 OR2D3Q8NGH3 330 aa6.38□□□□□ -1.39
ACTN1-208ENST00000553370 PRR34Q9NV39 138 aa6.38□□□□□ -1.39
ACTN1-208ENST00000553370 FAT3Q8TDW7 4589 aa6.38□□□□□ -1.39
ACTN1-208ENST00000553370 IGKV3OR2-268A0A0C4DH90 116 aa6.37□□□□□ -1.39
ACTN1-208ENST00000553370 G3V3Q6 166 aa6.37□□□□□ -1.39
ACTN1-208ENST00000553370 SMLR1H3BR10 107 aa6.37□□□□□ -1.39
ACTN1-208ENST00000553370 TEX46H3BTG2 121 aa6.37□□□□□ -1.39
ACTN1-208ENST00000553370 TRGC1P0CF51 173 aa6.37□□□□□ -1.39
ACTN1-208ENST00000553370 GZMBP10144 247 aa6.37□□□□□ -1.39
ACTN1-208ENST00000553370 AMTP48728 403 aa6.37□□□□□ -1.39
ACTN1-208ENST00000553370 CACNG7P62955 275 aa6.37□□□□□ -1.39
ACTN1-208ENST00000553370 IQCJQ1A5X6 159 aa6.37□□□□□ -1.39
ACTN1-208ENST00000553370 CENPWQ5EE01 88 aa6.37□□□□□ -1.39
ACTN1-208ENST00000553370 SUMO4Q6EEV6 95 aa6.37□□□□□ -1.39
ACTN1-208ENST00000553370 NTM-AS1Q6ZSK4 140 aa6.37□□□□□ -1.39
ACTN1-208ENST00000553370 TMUB2Q71RG4 321 aa6.37□□□□□ -1.39
ACTN1-208ENST00000553370 C7orf33Q8WU49 177 aa6.37□□□□□ -1.39
ACTN1-208ENST00000553370 MANBALQ9NQG1 85 aa6.37□□□□□ -1.39
ACTN1-208ENST00000553370 CYTL1Q9NRR1 136 aa6.37□□□□□ -1.39
ACTN1-208ENST00000553370 GNG13Q9P2W3 67 aa6.37□□□□□ -1.39
ACTN1-208ENST00000553370 HMCN2Q8NDA2 5059 aa6.36□□□□□ -1.39
ACTN1-208ENST00000553370 HNRNPA3P51991 378 aaKnown RBP6.36□□□□□ -1.39
ACTN1-208ENST00000553370 COTL1Q14019 142 aa6.36□□□□□ -1.39
ACTN1-208ENST00000553370 AMMECR1LQ6DCA0 310 aa6.36□□□□□ -1.39
ACTN1-208ENST00000553370 RASL11AQ6T310 242 aa6.36□□□□□ -1.39
ACTN1-208ENST00000553370 MBD3L1Q8WWY6 194 aa6.36□□□□□ -1.39
ACTN1-208ENST00000553370 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.35□□□□□ -1.39
ACTN1-208ENST00000553370 BCL2L11O43521 198 aa6.35□□□□□ -1.39
ACTN1-208ENST00000553370 IFNA1P01562 189 aa6.35□□□□□ -1.39
ACTN1-208ENST00000553370 GNG4P50150 75 aa6.35□□□□□ -1.39
ACTN1-208ENST00000553370 CNBPP62633 177 aaKnown RBP6.35□□□□□ -1.39
ACTN1-208ENST00000553370 ZNF345Q14585 488 aa6.35□□□□□ -1.39
ACTN1-208ENST00000553370 SDIM1Q6ZPB5 146 aa6.35□□□□□ -1.39
ACTN1-208ENST00000553370 RNF185Q96GF1 192 aa6.35□□□□□ -1.39
ACTN1-208ENST00000553370 KRTAP4-12Q9BQ66 201 aa6.35□□□□□ -1.39
ACTN1-208ENST00000553370 UBR4Q5T4S7 5183 aa6.34□□□□□ -1.39
ACTN1-208ENST00000553370 KRTAP9-6A0A140TA67 174 aa6.34□□□□□ -1.39
ACTN1-208ENST00000553370 PANO1I0J062 215 aa6.34□□□□□ -1.39
ACTN1-208ENST00000553370 M0QY20 66 aa6.34□□□□□ -1.39
ACTN1-208ENST00000553370 CHTF8P0CG12 524 aa6.34□□□□□ -1.39
ACTN1-208ENST00000553370 Q6ZRU5 148 aa6.34□□□□□ -1.39
ACTN1-208ENST00000553370 C9orf62Q8N4C0 152 aa6.34□□□□□ -1.39
ACTN1-208ENST00000553370 BIN3Q9NQY0 253 aa6.34□□□□□ -1.39
ACTN1-208ENST00000553370 KIF25-AS1Q9Y6Z4 181 aa6.34□□□□□ -1.39
ACTN1-208ENST00000553370 IGLV4-60A0A075B6I1 120 aa6.33□□□□□ -1.4
ACTN1-208ENST00000553370 A0A087WYN8 130 aa6.33□□□□□ -1.4
ACTN1-208ENST00000553370 IGKV2-24A0A0C4DH68 120 aa6.33□□□□□ -1.4
ACTN1-208ENST00000553370 F2Z2F3 143 aa6.33□□□□□ -1.4
ACTN1-208ENST00000553370 FOXI1Q12951 378 aa6.33□□□□□ -1.4
ACTN1-208ENST00000553370 MAJINQ3KP22 176 aa6.33□□□□□ -1.4
ACTN1-208ENST00000553370 HIGD2BQ4VC39 106 aa6.33□□□□□ -1.4
ACTN1-208ENST00000553370 RNASEKQ6P5S7 137 aaKnown RBP6.33□□□□□ -1.4
ACTN1-208ENST00000553370 SMIM15Q7Z3B0 74 aa6.33□□□□□ -1.4
ACTN1-208ENST00000553370 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
ACTN1-208ENST00000553370 C20orf203Q8NBC4 194 aa6.33□□□□□ -1.4
ACTN1-208ENST00000553370 GTSF1Q8WW33 167 aa6.33□□□□□ -1.4
ACTN1-208ENST00000553370 PGLYRP4Q96LB8 373 aa6.33□□□□□ -1.4
ACTN1-208ENST00000553370 NIT2Q9NQR4 276 aa6.33□□□□□ -1.4
ACTN1-208ENST00000553370 A0A0A0MQY5 61 aa6.32□□□□□ -1.4
ACTN1-208ENST00000553370 A0A1B0GUV1 79 aa6.32□□□□□ -1.4
ACTN1-208ENST00000553370 PHOX2AO14813 284 aa6.32□□□□□ -1.4
ACTN1-208ENST00000553370 IGLC6P0CF74 106 aa6.32□□□□□ -1.4
ACTN1-208ENST00000553370 TWIST1Q15672 202 aa6.32□□□□□ -1.4
ACTN1-208ENST00000553370 EIF5AL1Q6IS14 154 aaKnown RBP6.32□□□□□ -1.4
ACTN1-208ENST00000553370 LYZL1Q6UWQ5 148 aa6.32□□□□□ -1.4
ACTN1-208ENST00000553370 SPACA4Q8TDM5 124 aa6.32□□□□□ -1.4
ACTN1-208ENST00000553370 C11orf52Q96A22 123 aa6.32□□□□□ -1.4
ACTN1-208ENST00000553370 MED9Q9NWA0 146 aa6.32□□□□□ -1.4
ACTN1-208ENST00000553370 RAB19A4D1S5 217 aa6.31□□□□□ -1.4
ACTN1-208ENST00000553370 PDE6DO43924 150 aa6.31□□□□□ -1.4
ACTN1-208ENST00000553370 APCSP02743 223 aa6.31□□□□□ -1.4
ACTN1-208ENST00000553370 RPS10P46783 165 aaKnown RBP6.31□□□□□ -1.4
ACTN1-208ENST00000553370 KRTAP26-1Q6PEX3 210 aa6.31□□□□□ -1.4
ACTN1-208ENST00000553370 SMIM12Q96EX1 92 aa6.31□□□□□ -1.4
ACTN1-208ENST00000553370 GFRA4Q9GZZ7 299 aa6.31□□□□□ -1.4
ACTN1-208ENST00000553370 PKIGQ9Y2B9 76 aa6.31□□□□□ -1.4
ACTN1-208ENST00000553370 NTF3P20783 257 aa6.3□□□□□ -1.4
ACTN1-208ENST00000553370 CAMPP49913 170 aa6.3□□□□□ -1.4
ACTN1-208ENST00000553370 CCL20P78556 96 aa6.3□□□□□ -1.4
ACTN1-208ENST00000553370 MEF2BQ02080 365 aaPredicted RBP6.3□□□□□ -1.4
ACTN1-208ENST00000553370 COX6A2Q02221 97 aa6.3□□□□□ -1.4
ACTN1-208ENST00000553370 CIRBPQ14011 172 aaKnown RBP6.3□□□□□ -1.4
ACTN1-208ENST00000553370 SLC51BQ86UW2 128 aa6.3□□□□□ -1.4
ACTN1-208ENST00000553370 LYPD6BQ8NI32 183 aa6.3□□□□□ -1.4
ACTN1-208ENST00000553370 TMEM101Q96IK0 257 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms