RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 FOXA3P55318 350 aaPredicted RBP6.56□□□□□ -1.36
SLC48A1-209ENST00000552003 Q8N3U1 123 aa6.56□□□□□ -1.36
SLC48A1-209ENST00000552003 OR10AG1Q8NH19 301 aa6.56□□□□□ -1.36
SLC48A1-209ENST00000552003 PGLYRP4Q96LB8 373 aa6.56□□□□□ -1.36
SLC48A1-209ENST00000552003 CNFNQ9BYD5 112 aa6.56□□□□□ -1.36
SLC48A1-209ENST00000552003 MRPL16Q9NX20 251 aaKnown RBP6.56□□□□□ -1.36
SLC48A1-209ENST00000552003 TRAV9-1A0A075B6T8 112 aa6.55□□□□□ -1.36
SLC48A1-209ENST00000552003 A0A1B0GUT8 65 aa6.55□□□□□ -1.36
SLC48A1-209ENST00000552003 M0R381 172 aa6.55□□□□□ -1.36
SLC48A1-209ENST00000552003 RIGQ13278 110 aa6.55□□□□□ -1.36
SLC48A1-209ENST00000552003 ZNF876PQ49A33 203 aa6.55□□□□□ -1.36
SLC48A1-209ENST00000552003 NUP35Q8NFH5 326 aa6.55□□□□□ -1.36
SLC48A1-209ENST00000552003 RASL10AQ92737 203 aa6.55□□□□□ -1.36
SLC48A1-209ENST00000552003 A0A1B0GW15 77 aa6.54□□□□□ -1.36
SLC48A1-209ENST00000552003 A8MWV9 139 aa6.54□□□□□ -1.36
SLC48A1-209ENST00000552003 IGHV3-30P01768 117 aa6.54□□□□□ -1.36
SLC48A1-209ENST00000552003 IGHV3-33P01772 117 aa6.54□□□□□ -1.36
SLC48A1-209ENST00000552003 S100A8P05109 93 aa6.54□□□□□ -1.36
SLC48A1-209ENST00000552003 TRGC1P0CF51 173 aa6.54□□□□□ -1.36
SLC48A1-209ENST00000552003 IGHV3-30-3P0DP02 117 aa6.54□□□□□ -1.36
SLC48A1-209ENST00000552003 IGHV3-30-5P0DP03 117 aa6.54□□□□□ -1.36
SLC48A1-209ENST00000552003 SRIP30626 198 aa6.54□□□□□ -1.36
SLC48A1-209ENST00000552003 ATP5L2Q7Z4Y8 100 aa6.54□□□□□ -1.36
SLC48A1-209ENST00000552003 BTF3L4Q96K17 158 aa6.54□□□□□ -1.36
SLC48A1-209ENST00000552003 AP1S3Q96PC3 154 aa6.54□□□□□ -1.36
SLC48A1-209ENST00000552003 TRAV4A0A0B4J268 109 aa6.53□□□□□ -1.36
SLC48A1-209ENST00000552003 MUC21A0A0G2JKD1 596 aa6.53□□□□□ -1.36
SLC48A1-209ENST00000552003 LOC100131303A0A0U1RQF7 123 aa6.53□□□□□ -1.36
SLC48A1-209ENST00000552003 MUC21A0A140T8X8 626 aa6.53□□□□□ -1.36
SLC48A1-209ENST00000552003 SMIM17P0DL12 118 aa6.53□□□□□ -1.36
SLC48A1-209ENST00000552003 NTF3P20783 257 aa6.53□□□□□ -1.36
SLC48A1-209ENST00000552003 TWIST1Q15672 202 aa6.53□□□□□ -1.36
SLC48A1-209ENST00000552003 ATRAIDQ6UW56 229 aa6.53□□□□□ -1.36
SLC48A1-209ENST00000552003 SMIM15Q7Z3B0 74 aa6.53□□□□□ -1.36
SLC48A1-209ENST00000552003 SMCO4Q9NRQ5 59 aa6.53□□□□□ -1.36
SLC48A1-209ENST00000552003 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.53□□□□□ -1.36
SLC48A1-209ENST00000552003 RHODO00212 210 aa6.52□□□□□ -1.37
SLC48A1-209ENST00000552003 CIDEAO60543 219 aa6.52□□□□□ -1.37
SLC48A1-209ENST00000552003 SSTP61278 116 aa6.52□□□□□ -1.37
SLC48A1-209ENST00000552003 HBBP68871 147 aa6.52□□□□□ -1.37
SLC48A1-209ENST00000552003 OR4C5Q8NGB2 326 aa6.52□□□□□ -1.37
SLC48A1-209ENST00000552003 DNAJC30Q96LL9 226 aa6.52□□□□□ -1.37
SLC48A1-209ENST00000552003 URGCP-MRPS24S4R325 110 aa6.52□□□□□ -1.37
SLC48A1-209ENST00000552003 A0A0J9YXV3 536 aa6.51□□□□□ -1.37
SLC48A1-209ENST00000552003 CFAP126Q5VTH2 177 aa6.51□□□□□ -1.37
SLC48A1-209ENST00000552003 MRPL54Q6P161 138 aaKnown RBP6.51□□□□□ -1.37
SLC48A1-209ENST00000552003 RASL11AQ6T310 242 aa6.51□□□□□ -1.37
SLC48A1-209ENST00000552003 ZFP2Q6ZN57 461 aa6.51□□□□□ -1.37
SLC48A1-209ENST00000552003 ZNF479Q96JC4 524 aa6.51□□□□□ -1.37
SLC48A1-209ENST00000552003 TM2D2Q9BX73 214 aa6.51□□□□□ -1.37
SLC48A1-209ENST00000552003 DPH3P1Q9H4G8 78 aa6.51□□□□□ -1.37
SLC48A1-209ENST00000552003 A0A0U1RQV1 116 aa6.5□□□□□ -1.37
SLC48A1-209ENST00000552003 A0A1B0GXF2 115 aa6.5□□□□□ -1.37
SLC48A1-209ENST00000552003 CAMPP49913 170 aa6.5□□□□□ -1.37
SLC48A1-209ENST00000552003 COX19Q49B96 90 aa6.5□□□□□ -1.37
SLC48A1-209ENST00000552003 FAM74A4Q5TZK3 123 aa6.5□□□□□ -1.37
SLC48A1-209ENST00000552003 CBLN2Q8IUK8 224 aa6.5□□□□□ -1.37
SLC48A1-209ENST00000552003 TRBV24-1A0A075B6N3 115 aa6.49□□□□□ -1.37
SLC48A1-209ENST00000552003 A0A087WWL8 130 aa6.49□□□□□ -1.37
SLC48A1-209ENST00000552003 TRGV4A0A0C4DH28 118 aa6.49□□□□□ -1.37
SLC48A1-209ENST00000552003 MGPP08493 103 aa6.49□□□□□ -1.37
SLC48A1-209ENST00000552003 SLAQ13239 276 aa6.49□□□□□ -1.37
SLC48A1-209ENST00000552003 ELOBQ15370 118 aa6.49□□□□□ -1.37
SLC48A1-209ENST00000552003 ZNF56Q15929 161 aa6.49□□□□□ -1.37
SLC48A1-209ENST00000552003 C14orf178Q8N769 122 aaPredicted RBP6.49□□□□□ -1.37
SLC48A1-209ENST00000552003 GATD1Q8NB37 220 aa6.49□□□□□ -1.37
SLC48A1-209ENST00000552003 TMEM191AQ9H0A3 160 aa6.49□□□□□ -1.37
SLC48A1-209ENST00000552003 JPT2Q9H910 190 aa6.49□□□□□ -1.37
SLC48A1-209ENST00000552003 TGIF2-C20orf24A0A0A6YYL0 155 aa6.48□□□□□ -1.37
SLC48A1-209ENST00000552003 TIRAPP58753 221 aa6.48□□□□□ -1.37
SLC48A1-209ENST00000552003 RAB4BP61018 213 aa6.48□□□□□ -1.37
SLC48A1-209ENST00000552003 LAGE3Q14657 143 aa6.48□□□□□ -1.37
SLC48A1-209ENST00000552003 UFSP1Q6NVU6 142 aa6.48□□□□□ -1.37
SLC48A1-209ENST00000552003 C1orf43Q9BWL3 253 aa6.48□□□□□ -1.37
SLC48A1-209ENST00000552003 SAMD10Q9BYL1 202 aa6.48□□□□□ -1.37
SLC48A1-209ENST00000552003 KIF25-AS1Q9Y6Z4 181 aa6.48□□□□□ -1.37
SLC48A1-209ENST00000552003 IGHV3-73A0A0B4J1V6 119 aa6.47□□□□□ -1.37
SLC48A1-209ENST00000552003 F5H697 171 aa6.47□□□□□ -1.37
SLC48A1-209ENST00000552003 H7C1H1 209 aa6.47□□□□□ -1.37
SLC48A1-209ENST00000552003 SCO1O75880 301 aa6.47□□□□□ -1.37
SLC48A1-209ENST00000552003 HLA-DQA1P01909 254 aa6.47□□□□□ -1.37
SLC48A1-209ENST00000552003 MT-ND6P03923 174 aa6.47□□□□□ -1.37
SLC48A1-209ENST00000552003 GATA1P15976 413 aaPredicted RBP6.47□□□□□ -1.37
SLC48A1-209ENST00000552003 Q8N976 141 aa6.47□□□□□ -1.37
SLC48A1-209ENST00000552003 YPEL4Q96NS1 127 aa6.47□□□□□ -1.37
SLC48A1-209ENST00000552003 TRBV6-4A0A1B0GX49 114 aa6.46□□□□□ -1.38
SLC48A1-209ENST00000552003 RHOHQ15669 191 aa6.46□□□□□ -1.38
SLC48A1-209ENST00000552003 FAM104BQ5XKR9 115 aa6.46□□□□□ -1.38
SLC48A1-209ENST00000552003 TMEM136Q6ZRR5 245 aa6.46□□□□□ -1.38
SLC48A1-209ENST00000552003 MRAP2Q96G30 205 aa6.46□□□□□ -1.38
SLC48A1-209ENST00000552003 PRADC1Q9BSG0 188 aa6.46□□□□□ -1.38
SLC48A1-209ENST00000552003 GNB1LQ9BYB4 327 aa6.46□□□□□ -1.38
SLC48A1-209ENST00000552003 RAB4AP20338 218 aa6.45□□□□□ -1.38
SLC48A1-209ENST00000552003 SUMO4Q6EEV6 95 aa6.45□□□□□ -1.38
SLC48A1-209ENST00000552003 DAZ4Q86SG3 579 aaKnown RBP6.45□□□□□ -1.38
SLC48A1-209ENST00000552003 AMN1Q8IY45 258 aa6.45□□□□□ -1.38
SLC48A1-209ENST00000552003 DAZ3Q9NR90 486 aaKnown RBP6.45□□□□□ -1.38
SLC48A1-209ENST00000552003 MUC17Q685J3 4493 aa6.44□□□□□ -1.38
SLC48A1-209ENST00000552003 TRBV10-1A0A0K0K1A3 114 aa6.44□□□□□ -1.38
SLC48A1-209ENST00000552003 PPP1R17O96001 155 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms