RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 SLPIP03973 132 aa11.42□□□□□ -0.58
PRPF40B-215ENST00000551418 CTRLP40313 264 aa11.42□□□□□ -0.58
PRPF40B-215ENST00000551418 IQCJQ1A5X6 159 aa11.42□□□□□ -0.58
PRPF40B-215ENST00000551418 SUMO4Q6EEV6 95 aa11.42□□□□□ -0.58
PRPF40B-215ENST00000551418 RASL11AQ6T310 242 aa11.42□□□□□ -0.58
PRPF40B-215ENST00000551418 NUDT10Q8NFP7 164 aa11.42□□□□□ -0.58
PRPF40B-215ENST00000551418 NUDT11Q96G61 164 aa11.42□□□□□ -0.58
PRPF40B-215ENST00000551418 RPP21Q9H633 154 aaKnown RBP11.42□□□□□ -0.58
PRPF40B-215ENST00000551418 NTF3P20783 257 aa11.41□□□□□ -0.58
PRPF40B-215ENST00000551418 C20orf203Q8NBC4 194 aa11.41□□□□□ -0.58
PRPF40B-215ENST00000551418 CNFNQ9BYD5 112 aa11.41□□□□□ -0.58
PRPF40B-215ENST00000551418 IGLV4-60A0A075B6I1 120 aa11.4□□□□□ -0.58
PRPF40B-215ENST00000551418 CHTF8P0CG12 524 aa11.4□□□□□ -0.58
PRPF40B-215ENST00000551418 REG3AQ06141 175 aa11.4□□□□□ -0.58
PRPF40B-215ENST00000551418 SMIM15Q7Z3B0 74 aa11.4□□□□□ -0.58
PRPF40B-215ENST00000551418 PGLYRP4Q96LB8 373 aa11.4□□□□□ -0.58
PRPF40B-215ENST00000551418 NIT2Q9NQR4 276 aa11.4□□□□□ -0.58
PRPF40B-215ENST00000551418 TWIST1Q15672 202 aa11.39□□□□□ -0.59
PRPF40B-215ENST00000551418 ALKAL2Q6UX46 152 aa11.39□□□□□ -0.59
PRPF40B-215ENST00000551418 hCG_2014768A0A024R1R8 64 aa11.38□□□□□ -0.59
PRPF40B-215ENST00000551418 hDV102S1A0JD36 115 aa11.38□□□□□ -0.59
PRPF40B-215ENST00000551418 NDUFS6O75380 124 aaKnown RBP11.38□□□□□ -0.59
PRPF40B-215ENST00000551418 NKX2-5P52952 324 aaPredicted RBP11.38□□□□□ -0.59
PRPF40B-215ENST00000551418 CIRBPQ14011 172 aaKnown RBP11.38□□□□□ -0.59
PRPF40B-215ENST00000551418 LYPD6BQ8NI32 183 aa11.38□□□□□ -0.59
PRPF40B-215ENST00000551418 OCC1Q8TAD7 63 aa11.38□□□□□ -0.59
PRPF40B-215ENST00000551418 TMEM243Q9BU79 118 aa11.38□□□□□ -0.59
PRPF40B-215ENST00000551418 RNASE7Q9H1E1 156 aaKnown RBP11.38□□□□□ -0.59
PRPF40B-215ENST00000551418 A0A1B0GUV1 79 aa11.36□□□□□ -0.59
PRPF40B-215ENST00000551418 K7EN84 100 aa11.36□□□□□ -0.59
PRPF40B-215ENST00000551418 UBE2L6O14933 153 aa11.36□□□□□ -0.59
PRPF40B-215ENST00000551418 CNBPP62633 177 aaKnown RBP11.36□□□□□ -0.59
PRPF40B-215ENST00000551418 COTL1Q14019 142 aa11.36□□□□□ -0.59
PRPF40B-215ENST00000551418 TEX261Q6UWH6 196 aa11.36□□□□□ -0.59
PRPF40B-215ENST00000551418 FAM231DQ6ZW35 169 aa11.36□□□□□ -0.59
PRPF40B-215ENST00000551418 CLRN3Q8NCR9 226 aa11.36□□□□□ -0.59
PRPF40B-215ENST00000551418 A0A087WYN8 130 aa11.35□□□□□ -0.59
PRPF40B-215ENST00000551418 TRAV8-4A0A0B4J246 113 aa11.35□□□□□ -0.59
PRPF40B-215ENST00000551418 A8MWL6 223 aa11.35□□□□□ -0.59
PRPF40B-215ENST00000551418 GATCO43716 136 aaKnown RBP11.35□□□□□ -0.59
PRPF40B-215ENST00000551418 CT83Q5H943 113 aa11.35□□□□□ -0.59
PRPF40B-215ENST00000551418 BORCS7Q96B45 105 aa11.35□□□□□ -0.59
PRPF40B-215ENST00000551418 Q6ZRU5 148 aa11.34□□□□□ -0.59
PRPF40B-215ENST00000551418 DPH3Q96FX2 82 aa11.34□□□□□ -0.59
PRPF40B-215ENST00000551418 AMTP48728 403 aa11.33□□□□□ -0.6
PRPF40B-215ENST00000551418 EIF5A2Q9GZV4 153 aaKnown RBP11.33□□□□□ -0.6
PRPF40B-215ENST00000551418 IGHV3-64A0A075B6Q5 118 aa11.32□□□□□ -0.6
PRPF40B-215ENST00000551418 CEBPGP53567 150 aa11.32□□□□□ -0.6
PRPF40B-215ENST00000551418 ODF1Q14990 250 aa11.32□□□□□ -0.6
PRPF40B-215ENST00000551418 SPACA4Q8TDM5 124 aa11.32□□□□□ -0.6
PRPF40B-215ENST00000551418 NCR2O95944 276 aa11.31□□□□□ -0.6
PRPF40B-215ENST00000551418 FOXA3P55318 350 aaPredicted RBP11.31□□□□□ -0.6
PRPF40B-215ENST00000551418 C15orf56Q8N910 161 aa11.31□□□□□ -0.6
PRPF40B-215ENST00000551418 GTSF1Q8WW33 167 aa11.31□□□□□ -0.6
PRPF40B-215ENST00000551418 SMIM7Q9BQ49 75 aa11.31□□□□□ -0.6
PRPF40B-215ENST00000551418 GATD1Q8NB37 220 aa11.3□□□□□ -0.6
PRPF40B-215ENST00000551418 FAM210AQ96ND0 272 aa11.3□□□□□ -0.6
PRPF40B-215ENST00000551418 FAM231BA6NCW3 169 aa11.29□□□□□ -0.6
PRPF40B-215ENST00000551418 H7C423 109 aa11.29□□□□□ -0.6
PRPF40B-215ENST00000551418 PHOX2AO14813 284 aa11.29□□□□□ -0.6
PRPF40B-215ENST00000551418 AP5S1Q9NUS5 200 aa11.29□□□□□ -0.6
PRPF40B-215ENST00000551418 PLAC8Q9NZF1 115 aa11.29□□□□□ -0.6
PRPF40B-215ENST00000551418 IGKV3OR2-268A0A0C4DH90 116 aa11.28□□□□□ -0.6
PRPF40B-215ENST00000551418 GAGE12HA6NDE8 117 aa11.28□□□□□ -0.6
PRPF40B-215ENST00000551418 ZNF727A8MUV8 499 aa11.28□□□□□ -0.6
PRPF40B-215ENST00000551418 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.27□□□□□ -0.61
PRPF40B-215ENST00000551418 TRAV26-2A0A0B4J265 109 aa11.27□□□□□ -0.61
PRPF40B-215ENST00000551418 APCSP02743 223 aa11.27□□□□□ -0.61
PRPF40B-215ENST00000551418 COX6A2Q02221 97 aa11.27□□□□□ -0.61
PRPF40B-215ENST00000551418 HIGD2BQ4VC39 106 aa11.27□□□□□ -0.61
PRPF40B-215ENST00000551418 AMMECR1LQ6DCA0 310 aa11.27□□□□□ -0.61
PRPF40B-215ENST00000551418 LINC01551Q86U37 167 aa11.27□□□□□ -0.61
PRPF40B-215ENST00000551418 PRSS3P2Q8NHM4 247 aa11.27□□□□□ -0.61
PRPF40B-215ENST00000551418 TSKUQ8WUA8 353 aa11.27□□□□□ -0.61
PRPF40B-215ENST00000551418 RNF185Q96GF1 192 aa11.27□□□□□ -0.61
PRPF40B-215ENST00000551418 LRP2P98164 4655 aa11.26□□□□□ -0.61
PRPF40B-215ENST00000551418 A0A1B0GUT8 65 aa11.26□□□□□ -0.61
PRPF40B-215ENST00000551418 OSTCQ9NRP0 149 aa11.26□□□□□ -0.61
PRPF40B-215ENST00000551418 TNXBP22105 4242 aa11.26□□□□□ -0.61
PRPF40B-215ENST00000551418 SDHAF1A6NFY7 115 aa11.25□□□□□ -0.61
PRPF40B-215ENST00000551418 HIGD1CA8MV81 97 aa11.25□□□□□ -0.61
PRPF40B-215ENST00000551418 FAM74A3Q4VXF1 159 aa11.25□□□□□ -0.61
PRPF40B-215ENST00000551418 TRBV6-5A0A0K0K1A5 114 aa11.24□□□□□ -0.61
PRPF40B-215ENST00000551418 I3L3M4 83 aa11.24□□□□□ -0.61
PRPF40B-215ENST00000551418 CFAP161Q6P656 301 aa11.24□□□□□ -0.61
PRPF40B-215ENST00000551418 RPL39LQ96EH5 51 aaKnown RBP11.24□□□□□ -0.61
PRPF40B-215ENST00000551418 TMEM191AQ9H0A3 160 aa11.24□□□□□ -0.61
PRPF40B-215ENST00000551418 IGKV2-24A0A0C4DH68 120 aa11.23□□□□□ -0.61
PRPF40B-215ENST00000551418 SRP19P09132 144 aaKnown RBP11.23□□□□□ -0.61
PRPF40B-215ENST00000551418 ZNF25P17030 456 aaPredicted RBP11.23□□□□□ -0.61
PRPF40B-215ENST00000551418 PMCHP20382 165 aa11.23□□□□□ -0.61
PRPF40B-215ENST00000551418 RPS10P46783 165 aaKnown RBP11.23□□□□□ -0.61
PRPF40B-215ENST00000551418 MAJINQ3KP22 176 aa11.23□□□□□ -0.61
PRPF40B-215ENST00000551418 PPP1R17O96001 155 aa11.22□□□□□ -0.61
PRPF40B-215ENST00000551418 CHCHD10Q8WYQ3 142 aaPredicted RBP11.22□□□□□ -0.61
PRPF40B-215ENST00000551418 MRAP2Q96G30 205 aa11.22□□□□□ -0.61
PRPF40B-215ENST00000551418 BTF3L4Q96K17 158 aa11.22□□□□□ -0.61
PRPF40B-215ENST00000551418 ST20Q9HBF5 79 aa11.22□□□□□ -0.61
PRPF40B-215ENST00000551418 RNF213Q63HN8 5207 aa11.22□□□□□ -0.61
PRPF40B-215ENST00000551418 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms