RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 PKD1L1Q8TDX9 2849 aa-0.54□□□□□ -2.5
SCAF11-215ENST00000551391 PKDREJQ9NTG1 2253 aa-0.54□□□□□ -2.5
SCAF11-215ENST00000551391 ZNF518AQ6AHZ1 1483 aa-0.54□□□□□ -2.5
SCAF11-215ENST00000551391 MYOM3Q5VTT5 1437 aa-0.55□□□□□ -2.5
SCAF11-215ENST00000551391 TRAV22A0A0B4J277 110 aa-0.55□□□□□ -2.5
SCAF11-215ENST00000551391 SNCGO76070 127 aa-0.55□□□□□ -2.5
SCAF11-215ENST00000551391 PRM1P04553 51 aa-0.55□□□□□ -2.5
SCAF11-215ENST00000551391 SPRR2BP35325 72 aa-0.55□□□□□ -2.5
SCAF11-215ENST00000551391 COPZ2Q9P299 210 aa-0.55□□□□□ -2.5
SCAF11-215ENST00000551391 CHD6Q8TD26 2715 aa-0.55□□□□□ -2.5
SCAF11-215ENST00000551391 KDM3BQ7LBC6 1761 aa-0.55□□□□□ -2.5
SCAF11-215ENST00000551391 SRRM2Q9UQ35 2752 aaKnown RBP-0.56□□□□□ -2.5
SCAF11-215ENST00000551391 TSTD1Q8NFU3 115 aa-0.56□□□□□ -2.5
SCAF11-215ENST00000551391 TCEAL4Q96EI5 215 aa-0.56□□□□□ -2.5
SCAF11-215ENST00000551391 TMEM191AQ9H0A3 160 aa-0.56□□□□□ -2.5
SCAF11-215ENST00000551391 SCN3BQ9NY72 215 aa-0.56□□□□□ -2.5
SCAF11-215ENST00000551391 SPCS1Q9Y6A9 102 aa-0.56□□□□□ -2.5
SCAF11-215ENST00000551391 LRP1BQ9NZR2 4599 aa-0.56□□□□□ -2.5
SCAF11-215ENST00000551391 WNK3Q9BYP7 1800 aa-0.57□□□□□ -2.5
SCAF11-215ENST00000551391 VWFP04275 2813 aa-0.57□□□□□ -2.5
SCAF11-215ENST00000551391 PRDM2Q13029 1718 aa-0.57□□□□□ -2.5
SCAF11-215ENST00000551391 SPAARA0A1B0GVQ0 90 aa-0.57□□□□□ -2.5
SCAF11-215ENST00000551391 SIX6O95475 246 aa-0.57□□□□□ -2.5
SCAF11-215ENST00000551391 RPS25P62851 125 aaKnown RBP-0.57□□□□□ -2.5
SCAF11-215ENST00000551391 SMIM21Q3B7S5 101 aa-0.57□□□□□ -2.5
SCAF11-215ENST00000551391 S100A7L2Q5SY68 101 aa-0.57□□□□□ -2.5
SCAF11-215ENST00000551391 Q8IZM0 81 aa-0.57□□□□□ -2.5
SCAF11-215ENST00000551391 KCNRGQ8N5I3 272 aa-0.57□□□□□ -2.5
SCAF11-215ENST00000551391 ANP32BQ92688 251 aaKnown RBP-0.57□□□□□ -2.5
SCAF11-215ENST00000551391 SDF2Q99470 211 aa-0.57□□□□□ -2.5
SCAF11-215ENST00000551391 HERC1Q15751 4861 aa-0.57□□□□□ -2.5
SCAF11-215ENST00000551391 ALMS1Q8TCU4 4167 aa-0.57□□□□□ -2.5
SCAF11-215ENST00000551391 KMT2CQ8NEZ4 4911 aaKnown RBP-0.58□□□□□ -2.5
SCAF11-215ENST00000551391 COPZ1P61923 177 aa-0.58□□□□□ -2.5
SCAF11-215ENST00000551391 KRTAP19-8Q3LI54 63 aa-0.58□□□□□ -2.5
SCAF11-215ENST00000551391 SEC11CQ9BY50 192 aa-0.58□□□□□ -2.5
SCAF11-215ENST00000551391 TPT1P8Q9HAU6 139 aa-0.58□□□□□ -2.5
SCAF11-215ENST00000551391 LAMC1P11047 1609 aa-0.58□□□□□ -2.5
SCAF11-215ENST00000551391 PLXNB2O15031 1838 aa-0.59□□□□□ -2.5
SCAF11-215ENST00000551391 NPVFQ9HCQ7 196 aa-0.59□□□□□ -2.5
SCAF11-215ENST00000551391 R4GMQ9 66 aa-0.59□□□□□ -2.5
SCAF11-215ENST00000551391 LRP6O75581 1613 aa-0.6□□□□□ -2.5
SCAF11-215ENST00000551391 MRC1P22897 1456 aa-0.6□□□□□ -2.5
SCAF11-215ENST00000551391 LRRC37A2A6NM11 1700 aa-0.6□□□□□ -2.51
SCAF11-215ENST00000551391 SPRR1AP35321 89 aa-0.6□□□□□ -2.51
SCAF11-215ENST00000551391 SMCO1Q147U7 214 aa-0.6□□□□□ -2.51
SCAF11-215ENST00000551391 SMIM4Q8WVI0 70 aa-0.6□□□□□ -2.51
SCAF11-215ENST00000551391 CCDC167Q9P0B6 97 aa-0.6□□□□□ -2.51
SCAF11-215ENST00000551391 COL6A3P12111 3177 aa-0.6□□□□□ -2.51
SCAF11-215ENST00000551391 HECTD4Q9Y4D8 3996 aa-0.6□□□□□ -2.51
SCAF11-215ENST00000551391 ZANQ9Y493 2812 aa-0.6□□□□□ -2.51
SCAF11-215ENST00000551391 GRIN2AQ12879 1464 aa-0.61□□□□□ -2.51
SCAF11-215ENST00000551391 UNC13AQ9UPW8 1703 aa-0.61□□□□□ -2.51
SCAF11-215ENST00000551391 BCE1O60756 84 aa-0.61□□□□□ -2.51
SCAF11-215ENST00000551391 PPP1R17O96001 155 aa-0.61□□□□□ -2.51
SCAF11-215ENST00000551391 MAFIPQ8WZ33 124 aa-0.61□□□□□ -2.51
SCAF11-215ENST00000551391 BCL9LQ86UU0 1499 aa-0.61□□□□□ -2.51
SCAF11-215ENST00000551391 SPEF2Q9C093 1822 aa-0.61□□□□□ -2.51
SCAF11-215ENST00000551391 PLCE1Q9P212 2302 aa-0.62□□□□□ -2.51
SCAF11-215ENST00000551391 HCG22E2RYF7 251 aa-0.62□□□□□ -2.51
SCAF11-215ENST00000551391 M0R135 149 aa-0.62□□□□□ -2.51
SCAF11-215ENST00000551391 DPH3Q96FX2 82 aa-0.62□□□□□ -2.51
SCAF11-215ENST00000551391 LENEPQ9Y5L5 61 aa-0.62□□□□□ -2.51
SCAF11-215ENST00000551391 FAT2Q9NYQ8 4349 aa-0.62□□□□□ -2.51
SCAF11-215ENST00000551391 TRAV13-2A0A0B4J235 113 aa-0.63□□□□□ -2.51
SCAF11-215ENST00000551391 S100A3P33764 101 aa-0.63□□□□□ -2.51
SCAF11-215ENST00000551391 SPAG11BQ08648 103 aa-0.63□□□□□ -2.51
SCAF11-215ENST00000551391 KRTAP20-2Q3LI61 65 aa-0.63□□□□□ -2.51
SCAF11-215ENST00000551391 AGPAT4-IT1Q9H0P7 198 aa-0.63□□□□□ -2.51
SCAF11-215ENST00000551391 TP53AIP1Q9HCN2 124 aa-0.63□□□□□ -2.51
SCAF11-215ENST00000551391 FAT1Q14517 4588 aa-0.63□□□□□ -2.51
SCAF11-215ENST00000551391 C10orf71Q711Q0 1435 aa-0.64□□□□□ -2.51
SCAF11-215ENST00000551391 MYH8P13535 1937 aa-0.64□□□□□ -2.51
SCAF11-215ENST00000551391 PCLOQ9Y6V0 5065 aa-0.64□□□□□ -2.51
SCAF11-215ENST00000551391 ERCC6L2Q5T890 1561 aa-0.64□□□□□ -2.51
SCAF11-215ENST00000551391 PIGBOS1A0A0B4J2F0 54 aa-0.64□□□□□ -2.51
SCAF11-215ENST00000551391 AQP10Q96PS8 301 aa-0.64□□□□□ -2.51
SCAF11-215ENST00000551391 DCHS2Q6V1P9 2916 aa-0.64□□□□□ -2.51
SCAF11-215ENST00000551391 LAMA5O15230 3695 aa-0.64□□□□□ -2.51
SCAF11-215ENST00000551391 SPTBN1Q01082 2364 aaKnown RBP-0.64□□□□□ -2.51
SCAF11-215ENST00000551391 I3L2K1 104 aa-0.65□□□□□ -2.51
SCAF11-215ENST00000551391 MT4P47944 62 aa-0.65□□□□□ -2.51
SCAF11-215ENST00000551391 HAMPP81172 84 aa-0.65□□□□□ -2.51
SCAF11-215ENST00000551391 C12orf73Q69YU5 71 aa-0.65□□□□□ -2.51
SCAF11-215ENST00000551391 PFDN5Q99471 154 aa-0.65□□□□□ -2.51
SCAF11-215ENST00000551391 PAIP2BQ9ULR5 123 aaKnown RBP-0.65□□□□□ -2.51
SCAF11-215ENST00000551391 CFTRP13569 1480 aa-0.66□□□□□ -2.51
SCAF11-215ENST00000551391 CTXND1A0A1B0GTU2 59 aa-0.66□□□□□ -2.52
SCAF11-215ENST00000551391 LOC105371267A0A1B0GV96 52 aa-0.66□□□□□ -2.52
SCAF11-215ENST00000551391 C10orf128Q5T292 105 aa-0.66□□□□□ -2.52
SCAF11-215ENST00000551391 COPS9Q8WXC6 57 aa-0.66□□□□□ -2.52
SCAF11-215ENST00000551391 AMELXQ99217 191 aa-0.66□□□□□ -2.52
SCAF11-215ENST00000551391 PPIP5K1Q6PFW1 1433 aa-0.66□□□□□ -2.52
SCAF11-215ENST00000551391 PATJQ8NI35 1801 aa-0.66□□□□□ -2.52
SCAF11-215ENST00000551391 BSNQ9UPA5 3926 aa-0.67□□□□□ -2.52
SCAF11-215ENST00000551391 SPRR2AP35326 72 aa-0.67□□□□□ -2.52
SCAF11-215ENST00000551391 DCDP81605 110 aaKnown RBP-0.67□□□□□ -2.52
SCAF11-215ENST00000551391 COX17Q14061 63 aa-0.67□□□□□ -2.52
SCAF11-215ENST00000551391 SPAG11AQ6PDA7 123 aa-0.67□□□□□ -2.52
SCAF11-215ENST00000551391 Q8N8P6 123 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms