RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 SMIM20Q8N5G0 67 aa6.86□□□□□ -1.31
PPFIA2-216ENST00000549396 ZNF706Q9Y5V0 76 aaPredicted RBP6.86□□□□□ -1.31
PPFIA2-216ENST00000549396 IGHV4-28A0A0C4DH34 117 aa6.86□□□□□ -1.31
PPFIA2-216ENST00000549396 TMEM256-PLSCR3K7ERE1 68 aa6.86□□□□□ -1.31
PPFIA2-216ENST00000549396 BAALC-AS2P0C853 105 aa6.86□□□□□ -1.31
PPFIA2-216ENST00000549396 LINC01620Q4KN68 170 aa6.86□□□□□ -1.31
PPFIA2-216ENST00000549396 LINC00322Q6ZN03 302 aaPredicted RBP6.86□□□□□ -1.31
PPFIA2-216ENST00000549396 RNASE13Q5GAN3 156 aaKnown RBP6.85□□□□□ -1.31
PPFIA2-216ENST00000549396 DSCAMO60469 2012 aa6.85□□□□□ -1.31
PPFIA2-216ENST00000549396 MUSTN1Q8IVN3 82 aa6.85□□□□□ -1.31
PPFIA2-216ENST00000549396 COX17Q14061 63 aa6.85□□□□□ -1.31
PPFIA2-216ENST00000549396 CHCHD10Q8WYQ3 142 aaPredicted RBP6.85□□□□□ -1.31
PPFIA2-216ENST00000549396 COX7BP24311 80 aa6.85□□□□□ -1.31
PPFIA2-216ENST00000549396 CPAMD8Q8IZJ3 1885 aa6.84□□□□□ -1.31
PPFIA2-216ENST00000549396 IGLV2-11P01706 119 aa6.84□□□□□ -1.31
PPFIA2-216ENST00000549396 RPL39P62891 51 aaKnown RBP6.84□□□□□ -1.31
PPFIA2-216ENST00000549396 CD164L2Q6UWJ8 174 aa6.84□□□□□ -1.31
PPFIA2-216ENST00000549396 NCOA6Q14686 2063 aaPredicted RBP6.84□□□□□ -1.31
PPFIA2-216ENST00000549396 Q6ZUT4 128 aa6.84□□□□□ -1.32
PPFIA2-216ENST00000549396 K7EP13 123 aa6.83□□□□□ -1.32
PPFIA2-216ENST00000549396 CDSNQ15517 529 aa6.83□□□□□ -1.32
PPFIA2-216ENST00000549396 LINC01561Q8N1V8 128 aa6.83□□□□□ -1.32
PPFIA2-216ENST00000549396 C7orf33Q8WU49 177 aa6.83□□□□□ -1.32
PPFIA2-216ENST00000549396 TNRC6BQ9UPQ9 1833 aaKnown RBP6.83□□□□□ -1.32
PPFIA2-216ENST00000549396 IGLV10-54A0A075B6I4 117 aa6.82□□□□□ -1.32
PPFIA2-216ENST00000549396 ANKRD29Q8N6D5 301 aa6.82□□□□□ -1.32
PPFIA2-216ENST00000549396 ATG2AQ2TAZ0 1938 aa6.82□□□□□ -1.32
PPFIA2-216ENST00000549396 CADP27708 2225 aa6.82□□□□□ -1.32
PPFIA2-216ENST00000549396 Q8N976 141 aa6.82□□□□□ -1.32
PPFIA2-216ENST00000549396 EXPH5Q8NEV8 1989 aa6.82□□□□□ -1.32
PPFIA2-216ENST00000549396 TMEM223A0PJW6 202 aa6.82□□□□□ -1.32
PPFIA2-216ENST00000549396 IGLV4-3A0A075B6K6 122 aa6.82□□□□□ -1.32
PPFIA2-216ENST00000549396 MRPS12O15235 138 aaKnown RBP6.82□□□□□ -1.32
PPFIA2-216ENST00000549396 PCP2Q8IVA1 136 aa6.81□□□□□ -1.32
PPFIA2-216ENST00000549396 LINC00269Q8N2A0 174 aa6.81□□□□□ -1.32
PPFIA2-216ENST00000549396 MIR7-3HGQ8N6C7 128 aa6.81□□□□□ -1.32
PPFIA2-216ENST00000549396 TP53TG3Q9ULZ0 132 aa6.81□□□□□ -1.32
PPFIA2-216ENST00000549396 ZFHX2Q9C0A1 2572 aaPredicted RBP6.81□□□□□ -1.32
PPFIA2-216ENST00000549396 IGLV4-69A0A075B6H9 119 aa6.81□□□□□ -1.32
PPFIA2-216ENST00000549396 TRBV10-2A0A0K0K1G8 114 aa6.81□□□□□ -1.32
PPFIA2-216ENST00000549396 A0A1B0GX51 115 aa6.81□□□□□ -1.32
PPFIA2-216ENST00000549396 H3BMG7 143 aa6.81□□□□□ -1.32
PPFIA2-216ENST00000549396 HIST2H2BDQ6DRA6 164 aa6.81□□□□□ -1.32
PPFIA2-216ENST00000549396 SPTBN2O15020 2390 aa6.81□□□□□ -1.32
PPFIA2-216ENST00000549396 ANKHD1Q8IWZ3 2542 aaKnown RBP6.81□□□□□ -1.32
PPFIA2-216ENST00000549396 SYCNQ0VAF6 134 aa6.81□□□□□ -1.32
PPFIA2-216ENST00000549396 SPTBN1Q01082 2364 aaKnown RBP6.81□□□□□ -1.32
PPFIA2-216ENST00000549396 AVPP01185 164 aa6.8□□□□□ -1.32
PPFIA2-216ENST00000549396 RNF185Q96GF1 192 aa6.8□□□□□ -1.32
PPFIA2-216ENST00000549396 LOC107984640A0A0U1RRK4 108 aa6.8□□□□□ -1.32
PPFIA2-216ENST00000549396 RNASE3P12724 160 aaKnown RBP6.8□□□□□ -1.32
PPFIA2-216ENST00000549396 UBE2D3P61077 147 aa6.8□□□□□ -1.32
PPFIA2-216ENST00000549396 UBE2D2P62837 147 aa6.8□□□□□ -1.32
PPFIA2-216ENST00000549396 KPRPQ5T749 579 aaPredicted RBP6.8□□□□□ -1.32
PPFIA2-216ENST00000549396 HAMPP81172 84 aa6.8□□□□□ -1.32
PPFIA2-216ENST00000549396 IGHV4-30-4P0DP06 118 aa6.79□□□□□ -1.32
PPFIA2-216ENST00000549396 NAA38Q9BRA0 125 aaKnown RBP6.79□□□□□ -1.32
PPFIA2-216ENST00000549396 DOCK11Q5JSL3 2073 aa6.79□□□□□ -1.32
PPFIA2-216ENST00000549396 ROS1P08922 2347 aa6.79□□□□□ -1.32
PPFIA2-216ENST00000549396 TRACP01848 142 aa6.79□□□□□ -1.32
PPFIA2-216ENST00000549396 CRIP1P50238 77 aa6.79□□□□□ -1.32
PPFIA2-216ENST00000549396 POLR2KP53803 58 aaKnown RBP6.79□□□□□ -1.32
PPFIA2-216ENST00000549396 TP73-AS1Q9UF72 201 aa6.79□□□□□ -1.32
PPFIA2-216ENST00000549396 CSDC2Q9Y534 153 aaKnown RBP6.79□□□□□ -1.32
PPFIA2-216ENST00000549396 AKAP6Q13023 2319 aa6.79□□□□□ -1.32
PPFIA2-216ENST00000549396 DHRS4-AS1Q9P1J3 65 aa6.79□□□□□ -1.32
PPFIA2-216ENST00000549396 DEFB4AO15263 64 aa6.78□□□□□ -1.32
PPFIA2-216ENST00000549396 ZNF22P17026 224 aaPredicted RBP6.78□□□□□ -1.32
PPFIA2-216ENST00000549396 SHANK1Q9Y566 2161 aa6.78□□□□□ -1.32
PPFIA2-216ENST00000549396 WNK2Q9Y3S1 2297 aa6.78□□□□□ -1.32
PPFIA2-216ENST00000549396 KLK9Q2XQG4 91 aa6.78□□□□□ -1.32
PPFIA2-216ENST00000549396 BEAN1Q3B7T3 259 aa6.78□□□□□ -1.32
PPFIA2-216ENST00000549396 ATP5EP2Q5VTU8 51 aa6.78□□□□□ -1.32
PPFIA2-216ENST00000549396 RBM3P98179 157 aaKnown RBP6.78□□□□□ -1.32
PPFIA2-216ENST00000549396 ODF3L2Q3SX64 289 aa6.78□□□□□ -1.32
PPFIA2-216ENST00000549396 Q8IZM0 81 aa6.78□□□□□ -1.32
PPFIA2-216ENST00000549396 TRBV30A0A0K0K1B3 111 aa6.77□□□□□ -1.32
PPFIA2-216ENST00000549396 TSHBP01222 138 aa6.77□□□□□ -1.32
PPFIA2-216ENST00000549396 RBX1P62877 108 aa6.77□□□□□ -1.32
PPFIA2-216ENST00000549396 TEN1Q86WV5 123 aa6.77□□□□□ -1.32
PPFIA2-216ENST00000549396 FREM1Q5H8C1 2179 aa6.77□□□□□ -1.33
PPFIA2-216ENST00000549396 KRTAP10-9P60411 292 aa6.77□□□□□ -1.33
PPFIA2-216ENST00000549396 HIVEP2P31629 2446 aa6.77□□□□□ -1.33
PPFIA2-216ENST00000549396 NREPQ16612 68 aa6.77□□□□□ -1.33
PPFIA2-216ENST00000549396 NRACQ8N912 160 aa6.77□□□□□ -1.33
PPFIA2-216ENST00000549396 M0R378 163 aa6.77□□□□□ -1.33
PPFIA2-216ENST00000549396 PROK1P58294 105 aa6.77□□□□□ -1.33
PPFIA2-216ENST00000549396 DEFB1P60022 68 aa6.77□□□□□ -1.33
PPFIA2-216ENST00000549396 NTN5Q8WTR8 489 aaPredicted RBP6.77□□□□□ -1.33
PPFIA2-216ENST00000549396 POLEQ07864 2286 aa6.77□□□□□ -1.33
PPFIA2-216ENST00000549396 hADV29S1A0JD25 119 aa6.77□□□□□ -1.33
PPFIA2-216ENST00000549396 PCNX3Q9H6A9 2034 aa6.76□□□□□ -1.33
PPFIA2-216ENST00000549396 NCR3O14931 201 aa6.76□□□□□ -1.33
PPFIA2-216ENST00000549396 HIGD2BQ4VC39 106 aa6.76□□□□□ -1.33
PPFIA2-216ENST00000549396 C10orf99Q6UWK7 81 aa6.76□□□□□ -1.33
PPFIA2-216ENST00000549396 ESM1Q9NQ30 184 aa6.76□□□□□ -1.33
PPFIA2-216ENST00000549396 FHL3Q13643 280 aa6.76□□□□□ -1.33
PPFIA2-216ENST00000549396 GDF5OSQ5U4N7 250 aa6.76□□□□□ -1.33
PPFIA2-216ENST00000549396 BBC3Q96PG8 261 aaPredicted RBP6.76□□□□□ -1.33
PPFIA2-216ENST00000549396 UBE2D4Q9Y2X8 147 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms