RNA–Protein interactions for RNA: ENST00000546079.5

CLPTM1-203, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-203ENST00000546079 C5orf47Q569G3 176 aa12.21□□□□□ -0.46
CLPTM1-203ENST00000546079 VSIG2Q96IQ7 327 aa12.2□□□□□ -0.46
CLPTM1-203ENST00000546079 C19orf84I3L1E1 186 aa12.2□□□□□ -0.46
CLPTM1-203ENST00000546079 CXCL5P42830 114 aa12.2□□□□□ -0.46
CLPTM1-203ENST00000546079 LINC00527Q9UJ94 153 aa12.2□□□□□ -0.46
CLPTM1-203ENST00000546079 FAM104AQ969W3 186 aa12.19□□□□□ -0.46
CLPTM1-203ENST00000546079 J3KT08 172 aa12.19□□□□□ -0.46
CLPTM1-203ENST00000546079 C5orf38Q86SI9 138 aa12.19□□□□□ -0.46
CLPTM1-203ENST00000546079 SIRPDQ9H106 197 aa12.19□□□□□ -0.46
CLPTM1-203ENST00000546079 IGHV3-16A0A0C4DH30 117 aa12.18□□□□□ -0.46
CLPTM1-203ENST00000546079 LOC107984640A0A0U1RRK4 108 aa12.18□□□□□ -0.46
CLPTM1-203ENST00000546079 CD28P10747 220 aa12.18□□□□□ -0.46
CLPTM1-203ENST00000546079 NPC2P61916 151 aa12.18□□□□□ -0.46
CLPTM1-203ENST00000546079 TRAV41A0A0B4J266 112 aa12.17□□□□□ -0.46
CLPTM1-203ENST00000546079 TRAV12-3A0A0B4J271 114 aa12.17□□□□□ -0.46
CLPTM1-203ENST00000546079 COX7CP15954 63 aa12.17□□□□□ -0.46
CLPTM1-203ENST00000546079 C19orf54Q5BKX5 351 aa12.17□□□□□ -0.46
CLPTM1-203ENST00000546079 C5orf56Q8N8D9 126 aa12.17□□□□□ -0.46
CLPTM1-203ENST00000546079 CITED2Q99967 270 aaPredicted RBP12.17□□□□□ -0.46
CLPTM1-203ENST00000546079 UBTD1Q9HAC8 227 aa12.17□□□□□ -0.46
CLPTM1-203ENST00000546079 TINCRA0A1B0GVN0 87 aa12.16□□□□□ -0.46
CLPTM1-203ENST00000546079 ZFP36P26651 326 aaKnown RBP12.16□□□□□ -0.46
CLPTM1-203ENST00000546079 RPS28P62857 69 aaKnown RBP12.16□□□□□ -0.46
CLPTM1-203ENST00000546079 DUX5Q96PT3 197 aa12.16□□□□□ -0.46
CLPTM1-203ENST00000546079 PRRC2AP48634 2157 aaKnown RBP12.16□□□□□ -0.46
CLPTM1-203ENST00000546079 TRBV12-3P01733 135 aa12.16□□□□□ -0.46
CLPTM1-203ENST00000546079 PEMTQ9UBM1 199 aa12.16□□□□□ -0.46
CLPTM1-203ENST00000546079 COX7A2LO14548 114 aa12.15□□□□□ -0.46
CLPTM1-203ENST00000546079 CRYGAP11844 174 aa12.15□□□□□ -0.46
CLPTM1-203ENST00000546079 MED13LQ71F56 2210 aa12.15□□□□□ -0.46
CLPTM1-203ENST00000546079 CACNA1BQ00975 2339 aa12.15□□□□□ -0.46
CLPTM1-203ENST00000546079 IGKV3-7A0A075B6H7 116 aa12.15□□□□□ -0.46
CLPTM1-203ENST00000546079 AKAP6Q13023 2319 aa12.15□□□□□ -0.47
CLPTM1-203ENST00000546079 SMIM9A6NGZ8 99 aa12.14□□□□□ -0.47
CLPTM1-203ENST00000546079 SAA4P35542 130 aa12.14□□□□□ -0.47
CLPTM1-203ENST00000546079 FAM19A5Q7Z5A7 132 aaPredicted RBP12.14□□□□□ -0.47
CLPTM1-203ENST00000546079 C2orf48Q96LS8 159 aa12.14□□□□□ -0.47
CLPTM1-203ENST00000546079 RHPN1-AS1Q9BWJ2 59 aa12.14□□□□□ -0.47
CLPTM1-203ENST00000546079 A8MZ25 164 aa12.13□□□□□ -0.47
CLPTM1-203ENST00000546079 ATP5J2P56134 94 aa12.13□□□□□ -0.47
CLPTM1-203ENST00000546079 DAZ2Q13117 558 aaKnown RBP12.13□□□□□ -0.47
CLPTM1-203ENST00000546079 DAZ4Q86SG3 579 aaKnown RBP12.13□□□□□ -0.47
CLPTM1-203ENST00000546079 DAND5Q8N907 189 aa12.13□□□□□ -0.47
CLPTM1-203ENST00000546079 DAZ1Q9NQZ3 744 aaKnown RBP12.13□□□□□ -0.47
CLPTM1-203ENST00000546079 DAZ3Q9NR90 486 aaKnown RBP12.13□□□□□ -0.47
CLPTM1-203ENST00000546079 KLK5Q9Y337 293 aaPredicted RBP12.12□□□□□ -0.47
CLPTM1-203ENST00000546079 HIST1H4AP62805 103 aaKnown RBP12.12□□□□□ -0.47
CLPTM1-203ENST00000546079 TMEM219Q86XT9 240 aa12.12□□□□□ -0.47
CLPTM1-203ENST00000546079 TRACP01848 142 aa12.11□□□□□ -0.47
CLPTM1-203ENST00000546079 GAGE2AQ6NT46 116 aa12.11□□□□□ -0.47
CLPTM1-203ENST00000546079 CFAP46Q8IYW2 2715 aa12.11□□□□□ -0.47
CLPTM1-203ENST00000546079 BEAN1Q3B7T3 259 aa12.11□□□□□ -0.47
CLPTM1-203ENST00000546079 EDA2RQ9HAV5 297 aa12.11□□□□□ -0.47
CLPTM1-203ENST00000546079 NDUFA1O15239 70 aa12.1□□□□□ -0.47
CLPTM1-203ENST00000546079 CIRBPQ14011 172 aaKnown RBP12.1□□□□□ -0.47
CLPTM1-203ENST00000546079 BPESC1Q9GZL8 116 aa12.1□□□□□ -0.47
CLPTM1-203ENST00000546079 ATOX1O00244 68 aa12.09□□□□□ -0.47
CLPTM1-203ENST00000546079 FAM222AQ5U5X8 452 aa12.09□□□□□ -0.47
CLPTM1-203ENST00000546079 USMG5Q96IX5 58 aa12.09□□□□□ -0.47
CLPTM1-203ENST00000546079 ASH1LQ9NR48 2969 aaKnown RBP12.09□□□□□ -0.47
CLPTM1-203ENST00000546079 BAALC-AS2P0C853 105 aa12.09□□□□□ -0.47
CLPTM1-203ENST00000546079 LMO4P61968 165 aa12.09□□□□□ -0.47
CLPTM1-203ENST00000546079 LINC00308Q8TCZ7 52 aa12.09□□□□□ -0.47
CLPTM1-203ENST00000546079 IGHV1OR15-1A0A075B7D0 117 aa12.08□□□□□ -0.48
CLPTM1-203ENST00000546079 INAFM2P0DMQ5 153 aa12.08□□□□□ -0.48
CLPTM1-203ENST00000546079 RNASE13Q5GAN3 156 aaKnown RBP12.08□□□□□ -0.48
CLPTM1-203ENST00000546079 MOB4Q9Y3A3 225 aa12.08□□□□□ -0.48
CLPTM1-203ENST00000546079 SPTAN1Q13813 2472 aaKnown RBP12.08□□□□□ -0.48
CLPTM1-203ENST00000546079 TIRAPP58753 221 aa12.08□□□□□ -0.48
CLPTM1-203ENST00000546079 C22orf24Q9Y442 160 aa12.08□□□□□ -0.48
CLPTM1-203ENST00000546079 IGSF10Q6WRI0 2623 aa12.07□□□□□ -0.48
CLPTM1-203ENST00000546079 OR13C6PQ8NH95 151 aa12.06□□□□□ -0.48
CLPTM1-203ENST00000546079 UBE2D4Q9Y2X8 147 aa12.06□□□□□ -0.48
CLPTM1-203ENST00000546079 WIPF1O43516 503 aa12.06□□□□□ -0.48
CLPTM1-203ENST00000546079 COPS9Q8WXC6 57 aa12.06□□□□□ -0.48
CLPTM1-203ENST00000546079 ACACBO00763 2458 aa12.06□□□□□ -0.48
CLPTM1-203ENST00000546079 TRAV12-2A0A075B6T6 113 aa12.05□□□□□ -0.48
CLPTM1-203ENST00000546079 IGHG2P01859 326 aa12.05□□□□□ -0.48
CLPTM1-203ENST00000546079 IGLV5-45A0A087WSX0 123 aa12.05□□□□□ -0.48
CLPTM1-203ENST00000546079 H3BUA1 57 aa12.05□□□□□ -0.48
CLPTM1-203ENST00000546079 IGHV3-11P01762 117 aa12.05□□□□□ -0.48
CLPTM1-203ENST00000546079 Q8N2B8 174 aa12.05□□□□□ -0.48
CLPTM1-203ENST00000546079 ABCA2Q9BZC7 2435 aa12.05□□□□□ -0.48
CLPTM1-203ENST00000546079 CDKN2A-AS1Q9UH64 79 aa12.04□□□□□ -0.48
CLPTM1-203ENST00000546079 IGHV3OR16-10A0A075B7F0 116 aa12.04□□□□□ -0.48
CLPTM1-203ENST00000546079 CHCHD7Q9BUK0 85 aa12.04□□□□□ -0.48
CLPTM1-203ENST00000546079 hADV29S1A0JD25 119 aa12.03□□□□□ -0.48
CLPTM1-203ENST00000546079 K7EMT4 169 aa12.03□□□□□ -0.48
CLPTM1-203ENST00000546079 DOPEY1Q5JWR5 2465 aa12.02□□□□□ -0.48
CLPTM1-203ENST00000546079 RPL18AQ02543 176 aaKnown RBP12.02□□□□□ -0.49
CLPTM1-203ENST00000546079 TMEM258P61165 79 aa12.01□□□□□ -0.49
CLPTM1-203ENST00000546079 Q9H8V8 135 aa12.01□□□□□ -0.49
CLPTM1-203ENST00000546079 COL12A1Q99715 3063 aa12.01□□□□□ -0.49
CLPTM1-203ENST00000546079 IGLV5-39A0A0G2JS06 123 aa12□□□□□ -0.49
CLPTM1-203ENST00000546079 SOSTDC1Q6X4U4 206 aa12□□□□□ -0.49
CLPTM1-203ENST00000546079 USP9XQ93008 2570 aaPredicted RBP12□□□□□ -0.49
CLPTM1-203ENST00000546079 IGKV3-20P01619 116 aa12□□□□□ -0.49
CLPTM1-203ENST00000546079 FAM218AQ96MZ4 157 aa12□□□□□ -0.49
CLPTM1-203ENST00000546079 ZNF415Q09FC8 603 aa11.99□□□□□ -0.49
CLPTM1-203ENST00000546079 SPINK13Q1W4C9 94 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms