RNA–Protein interactions for RNA: ENST00000542953.1

NPIPB3-211, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-211ENST00000542953 MANBALQ9NQG1 85 aa3.02□□□□□ -1.93
NPIPB3-211ENST00000542953 VAX2Q9UIW0 290 aa3.02□□□□□ -1.93
NPIPB3-211ENST00000542953 MUC17Q685J3 4493 aa3.01□□□□□ -1.93
NPIPB3-211ENST00000542953 TRBV6-8A0A0A6YYG3 113 aa3.01□□□□□ -1.93
NPIPB3-211ENST00000542953 K7EN84 100 aa3.01□□□□□ -1.93
NPIPB3-211ENST00000542953 M0QY20 66 aa3.01□□□□□ -1.93
NPIPB3-211ENST00000542953 BCL2P10415 239 aa3.01□□□□□ -1.93
NPIPB3-211ENST00000542953 SSTP61278 116 aa3.01□□□□□ -1.93
NPIPB3-211ENST00000542953 PRR3P79522 188 aaKnown RBP3.01□□□□□ -1.93
NPIPB3-211ENST00000542953 RPL36AP83881 106 aaKnown RBP3.01□□□□□ -1.93
NPIPB3-211ENST00000542953 MEF2BQ02080 365 aaPredicted RBP3.01□□□□□ -1.93
NPIPB3-211ENST00000542953 KRTAP26-1Q6PEX3 210 aa3.01□□□□□ -1.93
NPIPB3-211ENST00000542953 ATRAIDQ6UW56 229 aa3.01□□□□□ -1.93
NPIPB3-211ENST00000542953 ENHOQ6UWT2 76 aa3.01□□□□□ -1.93
NPIPB3-211ENST00000542953 SDIM1Q6ZPB5 146 aa3.01□□□□□ -1.93
NPIPB3-211ENST00000542953 C9orf163Q8N9P6 203 aa3.01□□□□□ -1.93
NPIPB3-211ENST00000542953 RPL36ALQ969Q0 106 aaKnown RBP3.01□□□□□ -1.93
NPIPB3-211ENST00000542953 RNF185Q96GF1 192 aa3.01□□□□□ -1.93
NPIPB3-211ENST00000542953 KLK12Q9UKR0 248 aa3.01□□□□□ -1.93
NPIPB3-211ENST00000542953 A0A1B0GVG6 124 aa3□□□□□ -1.93
NPIPB3-211ENST00000542953 PHOX2AO14813 284 aa3□□□□□ -1.93
NPIPB3-211ENST00000542953 PDE6DO43924 150 aa3□□□□□ -1.93
NPIPB3-211ENST00000542953 GNG4P50150 75 aa3□□□□□ -1.93
NPIPB3-211ENST00000542953 ZNF56Q15929 161 aa3□□□□□ -1.93
NPIPB3-211ENST00000542953 MPV17L2Q567V2 206 aa3□□□□□ -1.93
NPIPB3-211ENST00000542953 SPANXN1Q5VSR9 72 aa3□□□□□ -1.93
NPIPB3-211ENST00000542953 SUMO4Q6EEV6 95 aa3□□□□□ -1.93
NPIPB3-211ENST00000542953 DGAT2L7PQ6IED9 249 aa3□□□□□ -1.93
NPIPB3-211ENST00000542953 EIF5AL1Q6IS14 154 aaKnown RBP3□□□□□ -1.93
NPIPB3-211ENST00000542953 SPINK6Q6UWN8 80 aa3□□□□□ -1.93
NPIPB3-211ENST00000542953 LYZL1Q6UWQ5 148 aa3□□□□□ -1.93
NPIPB3-211ENST00000542953 FER1L6-AS1Q8NA97 138 aa3□□□□□ -1.93
NPIPB3-211ENST00000542953 OR2D3Q8NGH3 330 aa3□□□□□ -1.93
NPIPB3-211ENST00000542953 LYPD6BQ8NI32 183 aa3□□□□□ -1.93
NPIPB3-211ENST00000542953 OCC1Q8TAD7 63 aa3□□□□□ -1.93
NPIPB3-211ENST00000542953 UBE2WQ96B02 151 aa3□□□□□ -1.93
NPIPB3-211ENST00000542953 SMIM12Q96EX1 92 aa3□□□□□ -1.93
NPIPB3-211ENST00000542953 CHCHD7Q9BUK0 85 aa3□□□□□ -1.93
NPIPB3-211ENST00000542953 MED9Q9NWA0 146 aa3□□□□□ -1.93
NPIPB3-211ENST00000542953 IGKV2D-24A0A075B6R9 120 aa2.99□□□□□ -1.93
NPIPB3-211ENST00000542953 A0A087WX48 190 aa2.99□□□□□ -1.93
NPIPB3-211ENST00000542953 TEX46H3BTG2 121 aa2.99□□□□□ -1.93
NPIPB3-211ENST00000542953 NTF3P20783 257 aa2.99□□□□□ -1.93
NPIPB3-211ENST00000542953 CTRLP40313 264 aa2.99□□□□□ -1.93
NPIPB3-211ENST00000542953 FOXA3P55318 350 aaPredicted RBP2.99□□□□□ -1.93
NPIPB3-211ENST00000542953 RPS20P60866 119 aaKnown RBP2.99□□□□□ -1.93
NPIPB3-211ENST00000542953 RBX1P62877 108 aa2.99□□□□□ -1.93
NPIPB3-211ENST00000542953 SRSF9Q13242 221 aaKnown RBP eCLIP2.99□□□□□ -1.93
NPIPB3-211ENST00000542953 IQCJQ1A5X6 159 aa2.99□□□□□ -1.93
NPIPB3-211ENST00000542953 ALKAL2Q6UX46 152 aa2.99□□□□□ -1.93
NPIPB3-211ENST00000542953 AKAP14Q86UN6 197 aa2.99□□□□□ -1.93
NPIPB3-211ENST00000542953 C7orf33Q8WU49 177 aa2.99□□□□□ -1.93
NPIPB3-211ENST00000542953 GTSF1Q8WW33 167 aa2.99□□□□□ -1.93
NPIPB3-211ENST00000542953 AP1S3Q96PC3 154 aa2.99□□□□□ -1.93
NPIPB3-211ENST00000542953 TPPP3Q9BW30 176 aa2.99□□□□□ -1.93
NPIPB3-211ENST00000542953 CNFNQ9BYD5 112 aa2.99□□□□□ -1.93
NPIPB3-211ENST00000542953 GFRA4Q9GZZ7 299 aa2.99□□□□□ -1.93
NPIPB3-211ENST00000542953 RNASE7Q9H1E1 156 aaKnown RBP2.99□□□□□ -1.93
NPIPB3-211ENST00000542953 PRR34Q9NV39 138 aa2.99□□□□□ -1.93
NPIPB3-211ENST00000542953 PLAC8Q9NZF1 115 aa2.99□□□□□ -1.93
NPIPB3-211ENST00000542953 A0A087WYN8 130 aa2.98□□□□□ -1.93
NPIPB3-211ENST00000542953 TMEM262E9PQX1 116 aa2.98□□□□□ -1.93
NPIPB3-211ENST00000542953 F2Z2F3 143 aa2.98□□□□□ -1.93
NPIPB3-211ENST00000542953 F5H697 171 aa2.98□□□□□ -1.93
NPIPB3-211ENST00000542953 IFNA1P01562 189 aa2.98□□□□□ -1.93
NPIPB3-211ENST00000542953 P01737 135 aa2.98□□□□□ -1.93
NPIPB3-211ENST00000542953 NKX2-5P52952 324 aaPredicted RBP2.98□□□□□ -1.93
NPIPB3-211ENST00000542953 CACNG7P62955 275 aa2.98□□□□□ -1.93
NPIPB3-211ENST00000542953 GAGE6Q13070 117 aa2.98□□□□□ -1.93
NPIPB3-211ENST00000542953 ELOBQ15370 118 aa2.98□□□□□ -1.93
NPIPB3-211ENST00000542953 RASL11AQ6T310 242 aa2.98□□□□□ -1.93
NPIPB3-211ENST00000542953 C15orf54Q8N8G6 183 aa2.98□□□□□ -1.93
NPIPB3-211ENST00000542953 GATD1Q8NB37 220 aa2.98□□□□□ -1.93
NPIPB3-211ENST00000542953 C20orf203Q8NBC4 194 aa2.98□□□□□ -1.93
NPIPB3-211ENST00000542953 SPACA4Q8TDM5 124 aa2.98□□□□□ -1.93
NPIPB3-211ENST00000542953 CHCHD5Q9BSY4 110 aa2.98□□□□□ -1.93
NPIPB3-211ENST00000542953 URGCP-MRPS24S4R325 110 aa2.98□□□□□ -1.93
NPIPB3-211ENST00000542953 IGLV4-60A0A075B6I1 120 aa2.97□□□□□ -1.93
NPIPB3-211ENST00000542953 TRAV26-2A0A0B4J265 109 aa2.97□□□□□ -1.93
NPIPB3-211ENST00000542953 C9JQL5 133 aa2.97□□□□□ -1.93
NPIPB3-211ENST00000542953 TMEM250H0YL14 139 aa2.97□□□□□ -1.93
NPIPB3-211ENST00000542953 ANGP03950 147 aaKnown RBP2.97□□□□□ -1.93
NPIPB3-211ENST00000542953 PRSS1P07477 247 aa2.97□□□□□ -1.93
NPIPB3-211ENST00000542953 MGPP08493 103 aa2.97□□□□□ -1.93
NPIPB3-211ENST00000542953 SMIM17P0DL12 118 aa2.97□□□□□ -1.93
NPIPB3-211ENST00000542953 TAGLN2P37802 199 aaKnown RBP2.97□□□□□ -1.93
NPIPB3-211ENST00000542953 BLOC1S1P78537 153 aa2.97□□□□□ -1.93
NPIPB3-211ENST00000542953 Q0VG73 95 aa2.97□□□□□ -1.93
NPIPB3-211ENST00000542953 TMEM97Q5BJF2 176 aa2.97□□□□□ -1.93
NPIPB3-211ENST00000542953 LCE1AQ5T7P2 110 aa2.97□□□□□ -1.93
NPIPB3-211ENST00000542953 FAM231DQ6ZW35 169 aa2.97□□□□□ -1.93
NPIPB3-211ENST00000542953 LINC00269Q8N2A0 174 aa2.97□□□□□ -1.93
NPIPB3-211ENST00000542953 RPP21Q9H633 154 aaKnown RBP2.97□□□□□ -1.93
NPIPB3-211ENST00000542953 NIT2Q9NQR4 276 aa2.97□□□□□ -1.93
NPIPB3-211ENST00000542953 TRBV25-1A0A075B6N4 114 aa2.96□□□□□ -1.94
NPIPB3-211ENST00000542953 IGHV1-24A0A0C4DH33 117 aa2.96□□□□□ -1.94
NPIPB3-211ENST00000542953 A0A1B0GUV1 79 aa2.96□□□□□ -1.94
NPIPB3-211ENST00000542953 XKRY2A2RUG3 117 aa2.96□□□□□ -1.94
NPIPB3-211ENST00000542953 FAM231BA6NCW3 169 aa2.96□□□□□ -1.94
NPIPB3-211ENST00000542953 USP17L23D6RBM5 183 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms