RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 CPSF1Q10570 1443 aaKnown RBP0.31□□□□□ -2.36
MDM2-227ENST00000540709 ZNF142P52746 1687 aaPredicted RBP0.31□□□□□ -2.36
MDM2-227ENST00000540709 PHLPP1O60346 1717 aa0.31□□□□□ -2.36
MDM2-227ENST00000540709 LOC285095A0A1B0GVY8 99 aa0.31□□□□□ -2.36
MDM2-227ENST00000540709 ZNF815PA8K554 130 aa0.31□□□□□ -2.36
MDM2-227ENST00000540709 F8VRH5 84 aa0.31□□□□□ -2.36
MDM2-227ENST00000540709 APOC3P02656 99 aa0.31□□□□□ -2.36
MDM2-227ENST00000540709 SPINK8P0C7L1 97 aa0.31□□□□□ -2.36
MDM2-227ENST00000540709 S100A3P33764 101 aa0.31□□□□□ -2.36
MDM2-227ENST00000540709 CCL18P55774 89 aa0.31□□□□□ -2.36
MDM2-227ENST00000540709 SPINK6Q6UWN8 80 aa0.31□□□□□ -2.36
MDM2-227ENST00000540709 SSBP3-AS1Q7Z2R9 100 aa0.31□□□□□ -2.36
MDM2-227ENST00000540709 BAGE2Q86Y30 109 aa0.31□□□□□ -2.36
MDM2-227ENST00000540709 TCEAL7Q9BRU2 100 aa0.31□□□□□ -2.36
MDM2-227ENST00000540709 DPH3P1Q9H4G8 78 aa0.31□□□□□ -2.36
MDM2-227ENST00000540709 PROK2Q9HC23 129 aa0.31□□□□□ -2.36
MDM2-227ENST00000540709 PLAC8Q9NZF1 115 aa0.31□□□□□ -2.36
MDM2-227ENST00000540709 CDK13Q14004 1512 aaKnown RBP0.31□□□□□ -2.36
MDM2-227ENST00000540709 ABCA4P78363 2273 aa0.31□□□□□ -2.36
MDM2-227ENST00000540709 PARP14Q460N5 1801 aa0.31□□□□□ -2.36
MDM2-227ENST00000540709 ARFGEF1Q9Y6D6 1849 aa0.31□□□□□ -2.36
MDM2-227ENST00000540709 KDM6BO15054 1643 aa0.31□□□□□ -2.36
MDM2-227ENST00000540709 NWD2Q9ULI1 1742 aa0.3□□□□□ -2.36
MDM2-227ENST00000540709 WDR7Q9Y4E6 1490 aa0.3□□□□□ -2.36
MDM2-227ENST00000540709 ZMYM4Q5VZL5 1548 aa0.3□□□□□ -2.36
MDM2-227ENST00000540709 A0A0D9SFI3 127 aa0.3□□□□□ -2.36
MDM2-227ENST00000540709 IGLC7A0M8Q6 106 aa0.3□□□□□ -2.36
MDM2-227ENST00000540709 TMEM218A2RU14 115 aa0.3□□□□□ -2.36
MDM2-227ENST00000540709 ATP6V1G2-DDX39BF2Z307 99 aa0.3□□□□□ -2.36
MDM2-227ENST00000540709 HMGN4O00479 90 aa0.3□□□□□ -2.36
MDM2-227ENST00000540709 PIN1P1O15428 100 aa0.3□□□□□ -2.36
MDM2-227ENST00000540709 TRAPPC2P0DI81 140 aa0.3□□□□□ -2.36
MDM2-227ENST00000540709 TRAPPC2BP0DI82 140 aa0.3□□□□□ -2.36
MDM2-227ENST00000540709 ATP5EP56381 51 aaPredicted RBP0.3□□□□□ -2.36
MDM2-227ENST00000540709 HSD52Q0P140 79 aa0.3□□□□□ -2.36
MDM2-227ENST00000540709 SFTA2Q6UW10 78 aa0.3□□□□□ -2.36
MDM2-227ENST00000540709 FAM213BQ8TBF2 198 aa0.3□□□□□ -2.36
MDM2-227ENST00000540709 C12orf57Q99622 126 aa0.3□□□□□ -2.36
MDM2-227ENST00000540709 NDUFA4L2Q9NRX3 87 aa0.3□□□□□ -2.36
MDM2-227ENST00000540709 FAIMQ9NVQ4 179 aa0.3□□□□□ -2.36
MDM2-227ENST00000540709 TANC1Q9C0D5 1861 aa0.3□□□□□ -2.36
MDM2-227ENST00000540709 TNS1Q9HBL0 1735 aaKnown RBP0.3□□□□□ -2.36
MDM2-227ENST00000540709 ZDBF2Q9HCK1 2354 aa0.3□□□□□ -2.36
MDM2-227ENST00000540709 LAMB1P07942 1786 aa0.29□□□□□ -2.36
MDM2-227ENST00000540709 A2ML1A8K2U0 1454 aa0.29□□□□□ -2.36
MDM2-227ENST00000540709 MYOM2P54296 1465 aa0.29□□□□□ -2.36
MDM2-227ENST00000540709 LRRC37A3O60309 1634 aa0.29□□□□□ -2.36
MDM2-227ENST00000540709 NAP1L6A6NFF2 107 aa0.29□□□□□ -2.36
MDM2-227ENST00000540709 CRYM-AS1A6NIL9 109 aa0.29□□□□□ -2.36
MDM2-227ENST00000540709 G3V318 75 aa0.29□□□□□ -2.36
MDM2-227ENST00000540709 M0R3E3 92 aa0.29□□□□□ -2.36
MDM2-227ENST00000540709 UQCR11O14957 56 aa0.29□□□□□ -2.36
MDM2-227ENST00000540709 S100A10P60903 97 aa0.29□□□□□ -2.36
MDM2-227ENST00000540709 KRTDAPP60985 99 aa0.29□□□□□ -2.36
MDM2-227ENST00000540709 UBA52P62987 128 aaKnown RBP0.29□□□□□ -2.36
MDM2-227ENST00000540709 COX17Q14061 63 aa0.29□□□□□ -2.36
MDM2-227ENST00000540709 FDCSPQ8NFU4 85 aa0.29□□□□□ -2.36
MDM2-227ENST00000540709 AP4S1Q9Y587 144 aa0.29□□□□□ -2.36
MDM2-227ENST00000540709 ARL2-SNX15V9GYD0 113 aa0.29□□□□□ -2.36
MDM2-227ENST00000540709 NALCNQ8IZF0 1738 aa0.29□□□□□ -2.36
MDM2-227ENST00000540709 ABCA1O95477 2261 aa0.29□□□□□ -2.36
MDM2-227ENST00000540709 PLXNA1Q9UIW2 1896 aa0.29□□□□□ -2.36
MDM2-227ENST00000540709 MRC1P22897 1456 aa0.29□□□□□ -2.36
MDM2-227ENST00000540709 MYH8P13535 1937 aa0.28□□□□□ -2.36
MDM2-227ENST00000540709 DOCK11Q5JSL3 2073 aa0.28□□□□□ -2.36
MDM2-227ENST00000540709 KNTC1P50748 2209 aa0.28□□□□□ -2.36
MDM2-227ENST00000540709 MED13LQ71F56 2210 aa0.28□□□□□ -2.36
MDM2-227ENST00000540709 GNGT2O14610 69 aa0.28□□□□□ -2.36
MDM2-227ENST00000540709 SFT2D2O95562 160 aa0.28□□□□□ -2.36
MDM2-227ENST00000540709 CFDP00746 253 aaPredicted RBP0.28□□□□□ -2.36
MDM2-227ENST00000540709 RBP2P50120 134 aa0.28□□□□□ -2.36
MDM2-227ENST00000540709 Q0VG73 95 aa0.28□□□□□ -2.36
MDM2-227ENST00000540709 Q5VV11 94 aa0.28□□□□□ -2.36
MDM2-227ENST00000540709 Q6JHZ5 121 aa0.28□□□□□ -2.36
MDM2-227ENST00000540709 C14orf144Q96I85 54 aa0.28□□□□□ -2.36
MDM2-227ENST00000540709 CGREF1Q99674 301 aa0.28□□□□□ -2.36
MDM2-227ENST00000540709 NXT2Q9NPJ8 142 aaKnown RBP0.28□□□□□ -2.36
MDM2-227ENST00000540709 PRO1854Q9UHT4 67 aa0.28□□□□□ -2.36
MDM2-227ENST00000540709 PRO0255Q9UI72 69 aa0.28□□□□□ -2.36
MDM2-227ENST00000540709 LINC01558Q9Y6Z2 57 aa0.28□□□□□ -2.36
MDM2-227ENST00000540709 SCAPERQ9BY12 1400 aa0.28□□□□□ -2.37
MDM2-227ENST00000540709 GOLGA3Q08378 1498 aa0.28□□□□□ -2.37
MDM2-227ENST00000540709 SSC5DA1L4H1 1573 aa0.28□□□□□ -2.37
MDM2-227ENST00000540709 EIF4G3O43432 1585 aaKnown RBP0.28□□□□□ -2.37
MDM2-227ENST00000540709 MUC5ACP98088 5654 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 TRAV30A0A087WSZ9 112 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 FXYD6-FXYD2A0A087WZ82 144 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 TRAV22A0A0B4J277 110 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 A0A1B0GWA3 101 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 TMEM262E9PQX1 116 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 H3BQ15 152 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 BCE1O60756 84 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 SPINK1P00995 79 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 MGPP08493 103 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 COX6CP09669 75 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 IGLC1P0CG04 106 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 SEC11AP67812 179 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 VAMP8Q9BV40 100 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 SPCS1Q9Y6A9 102 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 KIAA0100Q14667 2235 aaKnown RBP0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms