RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 C10orf91Q5T1B1 145 aa4.47□□□□□ -1.69
SNHG1-212ENST00000539975 LELP1Q5T871 98 aa4.47□□□□□ -1.69
SNHG1-212ENST00000539975 UPK3BQ9BT76 320 aa4.47□□□□□ -1.69
SNHG1-212ENST00000539975 ST20Q9HBF5 79 aa4.47□□□□□ -1.69
SNHG1-212ENST00000539975 KIF25-AS1Q9Y6Z4 181 aa4.47□□□□□ -1.69
SNHG1-212ENST00000539975 TRBV25-1A0A075B6N4 114 aa4.46□□□□□ -1.7
SNHG1-212ENST00000539975 IGHV3-38A0A0C4DH36 116 aa4.46□□□□□ -1.7
SNHG1-212ENST00000539975 M0R2N4 97 aa4.46□□□□□ -1.7
SNHG1-212ENST00000539975 UBE2L6O14933 153 aa4.46□□□□□ -1.7
SNHG1-212ENST00000539975 ADCYAP1P18509 176 aa4.46□□□□□ -1.7
SNHG1-212ENST00000539975 RAB4AP20338 218 aa4.46□□□□□ -1.7
SNHG1-212ENST00000539975 PMCHP20382 165 aa4.46□□□□□ -1.7
SNHG1-212ENST00000539975 MALP21145 153 aa4.46□□□□□ -1.7
SNHG1-212ENST00000539975 UBE2D3P61077 147 aa4.46□□□□□ -1.7
SNHG1-212ENST00000539975 UBE2D2P62837 147 aa4.46□□□□□ -1.7
SNHG1-212ENST00000539975 COTL1Q14019 142 aa4.46□□□□□ -1.7
SNHG1-212ENST00000539975 ELOBQ15370 118 aa4.46□□□□□ -1.7
SNHG1-212ENST00000539975 AMN1Q8IY45 258 aa4.46□□□□□ -1.7
SNHG1-212ENST00000539975 C10orf126Q8N4M7 172 aa4.46□□□□□ -1.7
SNHG1-212ENST00000539975 NEXN-AS1Q8NBZ9 246 aa4.46□□□□□ -1.7
SNHG1-212ENST00000539975 CHCHD5Q9BSY4 110 aa4.46□□□□□ -1.7
SNHG1-212ENST00000539975 TRBV6-8A0A0A6YYG3 113 aa4.45□□□□□ -1.7
SNHG1-212ENST00000539975 TRAV26-2A0A0B4J265 109 aa4.45□□□□□ -1.7
SNHG1-212ENST00000539975 IGHV1-24A0A0C4DH33 117 aa4.45□□□□□ -1.7
SNHG1-212ENST00000539975 I3L3M4 83 aa4.45□□□□□ -1.7
SNHG1-212ENST00000539975 VCYO14598 125 aa4.45□□□□□ -1.7
SNHG1-212ENST00000539975 TCAPO15273 167 aa4.45□□□□□ -1.7
SNHG1-212ENST00000539975 FCER1GP30273 86 aa4.45□□□□□ -1.7
SNHG1-212ENST00000539975 LINC00315P59091 139 aa4.45□□□□□ -1.7
SNHG1-212ENST00000539975 SMAGPQ0VAQ4 97 aa4.45□□□□□ -1.7
SNHG1-212ENST00000539975 FAM104BQ5XKR9 115 aa4.45□□□□□ -1.7
SNHG1-212ENST00000539975 ORMDL3Q8N138 153 aa4.45□□□□□ -1.7
SNHG1-212ENST00000539975 GATD1Q8NB37 220 aa4.45□□□□□ -1.7
SNHG1-212ENST00000539975 KIR2DL4Q99706 377 aa4.45□□□□□ -1.7
SNHG1-212ENST00000539975 NBDYA0A0U1RRE5 68 aa4.44□□□□□ -1.7
SNHG1-212ENST00000539975 SDHAF1A6NFY7 115 aa4.44□□□□□ -1.7
SNHG1-212ENST00000539975 NCR2O95944 276 aa4.44□□□□□ -1.7
SNHG1-212ENST00000539975 MT-ND6P03923 174 aa4.44□□□□□ -1.7
SNHG1-212ENST00000539975 RAB5AP20339 215 aa4.44□□□□□ -1.7
SNHG1-212ENST00000539975 AMTP48728 403 aa4.44□□□□□ -1.7
SNHG1-212ENST00000539975 FOXI1Q12951 378 aa4.44□□□□□ -1.7
SNHG1-212ENST00000539975 C1orf134Q5TEV5 83 aa4.44□□□□□ -1.7
SNHG1-212ENST00000539975 TMEM136Q6ZRR5 245 aa4.44□□□□□ -1.7
SNHG1-212ENST00000539975 NFE4Q86UQ8 179 aa4.44□□□□□ -1.7
SNHG1-212ENST00000539975 DNAH9Q9NYC9 4486 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 TRBV6-5A0A0K0K1A5 114 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 A0A1B0GXF2 115 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 D6R8Y8 96 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 IGHV3-30P01768 117 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 IGHV3-33P01772 117 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 HLA-DQA1P01909 254 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 CRPP02741 224 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 APCSP02743 223 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 IGHV3-30-3P0DP02 117 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 IGHV3-30-5P0DP03 117 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 SUMO2P61956 95 aaKnown RBP4.43□□□□□ -1.7
SNHG1-212ENST00000539975 MRPL51Q4U2R6 128 aaKnown RBP4.43□□□□□ -1.7
SNHG1-212ENST00000539975 AMMECR1LQ6DCA0 310 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 WFDC10BQ8IUB3 73 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 TMEM18Q96B42 140 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 RMI2Q96E14 147 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 RPL39LQ96EH5 51 aaKnown RBP4.43□□□□□ -1.7
SNHG1-212ENST00000539975 TMEM101Q96IK0 257 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 PRELID3AQ96N28 172 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 C20orf78Q9BR46 151 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 TMEM243Q9BU79 118 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 CHCHD7Q9BUK0 85 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 GNB1LQ9BYB4 327 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 SMCO4Q9NRQ5 59 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 Q9UF83 564 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 LAMTOR2Q9Y2Q5 125 aa4.43□□□□□ -1.7
SNHG1-212ENST00000539975 HUWE1Q7Z6Z7 4374 aaKnown RBP4.42□□□□□ -1.7
SNHG1-212ENST00000539975 TRAV8-3A0A0A6YYJ7 113 aa4.42□□□□□ -1.7
SNHG1-212ENST00000539975 SMKR1H3BMG3 65 aa4.42□□□□□ -1.7
SNHG1-212ENST00000539975 PHOX2AO14813 284 aa4.42□□□□□ -1.7
SNHG1-212ENST00000539975 PSCAO43653 123 aa4.42□□□□□ -1.7
SNHG1-212ENST00000539975 TNFRSF6BO95407 300 aa4.42□□□□□ -1.7
SNHG1-212ENST00000539975 DNAH10OSP0CZ25 163 aa4.42□□□□□ -1.7
SNHG1-212ENST00000539975 LINC00694P0DN24 101 aa4.42□□□□□ -1.7
SNHG1-212ENST00000539975 G0S2P27469 103 aa4.42□□□□□ -1.7
SNHG1-212ENST00000539975 FABP9Q0Z7S8 132 aa4.42□□□□□ -1.7
SNHG1-212ENST00000539975 IQCJQ1A5X6 159 aa4.42□□□□□ -1.7
SNHG1-212ENST00000539975 LINC01556Q5JQF7 62 aa4.42□□□□□ -1.7
SNHG1-212ENST00000539975 DGAT2L7PQ6IED9 249 aa4.42□□□□□ -1.7
SNHG1-212ENST00000539975 C6orf223Q8N319 242 aa4.42□□□□□ -1.7
SNHG1-212ENST00000539975 RNF185Q96GF1 192 aa4.42□□□□□ -1.7
SNHG1-212ENST00000539975 TMEM70Q9BUB7 260 aa4.42□□□□□ -1.7
SNHG1-212ENST00000539975 TM2D2Q9BX73 214 aa4.42□□□□□ -1.7
SNHG1-212ENST00000539975 MAP1LC3AQ9H492 121 aa4.42□□□□□ -1.7
SNHG1-212ENST00000539975 COX11Q9Y6N1 276 aa4.42□□□□□ -1.7
SNHG1-212ENST00000539975 TRBV24-1A0A075B6N3 115 aa4.41□□□□□ -1.7
SNHG1-212ENST00000539975 TRBV27A0A0K0K1C4 114 aa4.41□□□□□ -1.7
SNHG1-212ENST00000539975 H7C423 109 aa4.41□□□□□ -1.7
SNHG1-212ENST00000539975 ANGP03950 147 aaKnown RBP4.41□□□□□ -1.7
SNHG1-212ENST00000539975 Q0VG73 95 aa4.41□□□□□ -1.7
SNHG1-212ENST00000539975 GAGE6Q13070 117 aa4.41□□□□□ -1.7
SNHG1-212ENST00000539975 RNASEKQ6P5S7 137 aaKnown RBP4.41□□□□□ -1.7
SNHG1-212ENST00000539975 LINC00336Q6ZUF6 198 aa4.41□□□□□ -1.7
SNHG1-212ENST00000539975 NIT1Q86X76 327 aa4.41□□□□□ -1.7
SNHG1-212ENST00000539975 TRAPPC1Q9Y5R8 145 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms