RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 ZNF418Q8TF45 676 aaPredicted RBP12.97□□□□□ -0.33
GNE-204ENST00000539208 CHD6Q8TD26 2715 aa12.97□□□□□ -0.33
GNE-204ENST00000539208 FAM104AQ969W3 186 aa12.96□□□□□ -0.33
GNE-204ENST00000539208 FAM110AQ9BQ89 295 aa12.96□□□□□ -0.33
GNE-204ENST00000539208 A0A0J9YY99 117 aa12.96□□□□□ -0.34
GNE-204ENST00000539208 TSPEAR-AS2P59090 65 aa12.96□□□□□ -0.34
GNE-204ENST00000539208 Q9UF83 564 aa12.96□□□□□ -0.34
GNE-204ENST00000539208 J3QQQ9 107 aa12.95□□□□□ -0.34
GNE-204ENST00000539208 LEPROTO15243 131 aa12.95□□□□□ -0.34
GNE-204ENST00000539208 NDUFA7O95182 113 aa12.95□□□□□ -0.34
GNE-204ENST00000539208 ZNF22P17026 224 aaPredicted RBP12.95□□□□□ -0.34
GNE-204ENST00000539208 CHCHD7Q9BUK0 85 aa12.95□□□□□ -0.34
GNE-204ENST00000539208 SPANXB1Q9NS25 103 aaPredicted RBP12.95□□□□□ -0.34
GNE-204ENST00000539208 CCDC168Q8NDH2 2452 aa12.95□□□□□ -0.34
GNE-204ENST00000539208 TMEM238LA0A1B0GVL6 79 aa12.94□□□□□ -0.34
GNE-204ENST00000539208 A6NJY4 79 aa12.94□□□□□ -0.34
GNE-204ENST00000539208 SPANXA1Q9NS26 97 aa12.94□□□□□ -0.34
GNE-204ENST00000539208 KMT2BQ9UMN6 2715 aaPredicted RBP12.94□□□□□ -0.34
GNE-204ENST00000539208 SRSF9Q13242 221 aaKnown RBP eCLIP12.94□□□□□ -0.34
GNE-204ENST00000539208 OCIAD2Q56VL3 154 aa12.94□□□□□ -0.34
GNE-204ENST00000539208 A0A0J9YXV3 536 aa12.93□□□□□ -0.34
GNE-204ENST00000539208 SAP30O75446 220 aa12.93□□□□□ -0.34
GNE-204ENST00000539208 IGLV1-51P01701 117 aa12.93□□□□□ -0.34
GNE-204ENST00000539208 RBX1P62877 108 aa12.93□□□□□ -0.34
GNE-204ENST00000539208 CBY1Q9Y3M2 126 aa12.93□□□□□ -0.34
GNE-204ENST00000539208 LGALS3P17931 250 aaKnown RBP12.93□□□□□ -0.34
GNE-204ENST00000539208 MRPS36P82909 103 aaKnown RBP12.93□□□□□ -0.34
GNE-204ENST00000539208 SLC25A29Q8N8R3 303 aa12.93□□□□□ -0.34
GNE-204ENST00000539208 ZNF479Q96JC4 524 aa12.93□□□□□ -0.34
GNE-204ENST00000539208 ADARB2-AS1A8MUL3 147 aa12.92□□□□□ -0.34
GNE-204ENST00000539208 RRN3P1Q2M238 152 aa12.92□□□□□ -0.34
GNE-204ENST00000539208 UBE2D4Q9Y2X8 147 aa12.92□□□□□ -0.34
GNE-204ENST00000539208 NF1P21359 2839 aa12.92□□□□□ -0.34
GNE-204ENST00000539208 TMEM263Q8WUH6 116 aaKnown RBP12.91□□□□□ -0.34
GNE-204ENST00000539208 IGHV3OR16-12A0A075B7B8 117 aa12.91□□□□□ -0.34
GNE-204ENST00000539208 UBE2D1P51668 147 aa12.91□□□□□ -0.34
GNE-204ENST00000539208 COTL1Q14019 142 aa12.91□□□□□ -0.34
GNE-204ENST00000539208 C19orf73Q9NVV2 129 aa12.9□□□□□ -0.34
GNE-204ENST00000539208 TRGV1A0A0A0MS02 117 aa12.89□□□□□ -0.35
GNE-204ENST00000539208 GIG44P09565 113 aaPredicted RBP12.89□□□□□ -0.35
GNE-204ENST00000539208 CEMP1Q6PRD7 247 aaPredicted RBP12.88□□□□□ -0.35
GNE-204ENST00000539208 IGHV3-30P01768 117 aa12.88□□□□□ -0.35
GNE-204ENST00000539208 IGHV3-30-5P0DP03 117 aa12.88□□□□□ -0.35
GNE-204ENST00000539208 DAZ2Q13117 558 aaKnown RBP12.88□□□□□ -0.35
GNE-204ENST00000539208 TRBV10-1A0A0K0K1A3 114 aa12.87□□□□□ -0.35
GNE-204ENST00000539208 TINCRA0A1B0GVN0 87 aa12.87□□□□□ -0.35
GNE-204ENST00000539208 K7ERU9 68 aa12.87□□□□□ -0.35
GNE-204ENST00000539208 TIMM21Q9BVV7 248 aa12.87□□□□□ -0.35
GNE-204ENST00000539208 TRAV4A0A0B4J268 109 aa12.87□□□□□ -0.35
GNE-204ENST00000539208 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.86□□□□□ -0.35
GNE-204ENST00000539208 IGHV3-38A0A0C4DH36 116 aa12.86□□□□□ -0.35
GNE-204ENST00000539208 IGKV2-29A2NJV5 120 aaPredicted RBP12.86□□□□□ -0.35
GNE-204ENST00000539208 ITPR2Q14571 2701 aa12.86□□□□□ -0.35
GNE-204ENST00000539208 Q6ZTI0 123 aa12.86□□□□□ -0.35
GNE-204ENST00000539208 C1QTNF4Q9BXJ3 329 aa12.86□□□□□ -0.35
GNE-204ENST00000539208 CUBNO60494 3623 aa12.85□□□□□ -0.35
GNE-204ENST00000539208 C16orf74Q96GX8 76 aa12.84□□□□□ -0.35
GNE-204ENST00000539208 UNC79Q9P2D8 2635 aa12.84□□□□□ -0.35
GNE-204ENST00000539208 ANK3Q12955 4377 aaKnown RBP12.84□□□□□ -0.35
GNE-204ENST00000539208 WNK1Q9H4A3 2382 aa12.84□□□□□ -0.35
GNE-204ENST00000539208 K7EQD1 137 aa12.84□□□□□ -0.35
GNE-204ENST00000539208 IGHV3-30-3P0DP02 117 aa12.84□□□□□ -0.35
GNE-204ENST00000539208 RPL36AP83881 106 aaKnown RBP12.84□□□□□ -0.35
GNE-204ENST00000539208 RPL36ALQ969Q0 106 aaKnown RBP12.84□□□□□ -0.35
GNE-204ENST00000539208 PGPEP1Q9NXJ5 209 aa12.84□□□□□ -0.35
GNE-204ENST00000539208 ACANP16112 2415 aa12.84□□□□□ -0.35
GNE-204ENST00000539208 Q6ZUT4 128 aa12.83□□□□□ -0.36
GNE-204ENST00000539208 NDUFA11Q86Y39 141 aa12.83□□□□□ -0.36
GNE-204ENST00000539208 CSNK1G2-AS1Q8NCQ2 148 aa12.83□□□□□ -0.36
GNE-204ENST00000539208 HELZ2Q9BYK8 2649 aaKnown RBP12.83□□□□□ -0.36
GNE-204ENST00000539208 IGHV1-58A0A0C4DH39 117 aa12.83□□□□□ -0.36
GNE-204ENST00000539208 PLAC8L1A1L4L8 177 aa12.83□□□□□ -0.36
GNE-204ENST00000539208 F8W1H4 67 aa12.83□□□□□ -0.36
GNE-204ENST00000539208 RNASE13Q5GAN3 156 aaKnown RBP12.83□□□□□ -0.36
GNE-204ENST00000539208 DAZ4Q86SG3 579 aaKnown RBP12.83□□□□□ -0.36
GNE-204ENST00000539208 DAZ3Q9NR90 486 aaKnown RBP12.83□□□□□ -0.36
GNE-204ENST00000539208 IGHV3-64A0A075B6Q5 118 aa12.82□□□□□ -0.36
GNE-204ENST00000539208 CIDEAO60543 219 aa12.82□□□□□ -0.36
GNE-204ENST00000539208 WFDC10AQ9H1F0 79 aa12.82□□□□□ -0.36
GNE-204ENST00000539208 NOP10Q9NPE3 64 aaKnown RBP12.82□□□□□ -0.36
GNE-204ENST00000539208 SMR3AQ99954 134 aa12.81□□□□□ -0.36
GNE-204ENST00000539208 OVOL2Q9BRP0 275 aa12.81□□□□□ -0.36
GNE-204ENST00000539208 TIRAPP58753 221 aa12.81□□□□□ -0.36
GNE-204ENST00000539208 C10orf126Q8N4M7 172 aa12.81□□□□□ -0.36
GNE-204ENST00000539208 TMEM238C9JI98 176 aa12.8□□□□□ -0.36
GNE-204ENST00000539208 CFC1BP0CG36 223 aa12.8□□□□□ -0.36
GNE-204ENST00000539208 CFC1P0CG37 223 aa12.8□□□□□ -0.36
GNE-204ENST00000539208 RPL35AP18077 110 aaKnown RBP12.8□□□□□ -0.36
GNE-204ENST00000539208 UBE2D3P61077 147 aa12.8□□□□□ -0.36
GNE-204ENST00000539208 UBE2D2P62837 147 aa12.8□□□□□ -0.36
GNE-204ENST00000539208 VSIG2Q96IQ7 327 aa12.8□□□□□ -0.36
GNE-204ENST00000539208 CSDC2Q9Y534 153 aaKnown RBP12.8□□□□□ -0.36
GNE-204ENST00000539208 A0A0J9YXY3 114 aa12.8□□□□□ -0.36
GNE-204ENST00000539208 TSPAN13O95857 204 aa12.8□□□□□ -0.36
GNE-204ENST00000539208 RNF151Q2KHN1 245 aa12.8□□□□□ -0.36
GNE-204ENST00000539208 IGLV5-45A0A087WSX0 123 aa12.79□□□□□ -0.36
GNE-204ENST00000539208 APOMO95445 188 aa12.79□□□□□ -0.36
GNE-204ENST00000539208 KRTAP10-3P60369 221 aa12.79□□□□□ -0.36
GNE-204ENST00000539208 DGAT2L7PQ6IED9 249 aa12.79□□□□□ -0.36
GNE-204ENST00000539208 H3BMG7 143 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms