RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 WDR97A6NE52 1622 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 PCDH15Q96QU1 1955 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 BPTFQ12830 3046 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 ICE1Q9Y2F5 2266 aa1.17□□□□□ -2.22
SRGAP1-203ENST00000537585 SORL1Q92673 2214 aa1.16□□□□□ -2.22
SRGAP1-203ENST00000537585 BRCA2P51587 3418 aa1.16□□□□□ -2.22
SRGAP1-203ENST00000537585 EP400Q96L91 3159 aa1.16□□□□□ -2.22
SRGAP1-203ENST00000537585 ARAP2Q8WZ64 1704 aa1.16□□□□□ -2.22
SRGAP1-203ENST00000537585 TRBV7-1A0A0A6YYK4 115 aa1.16□□□□□ -2.22
SRGAP1-203ENST00000537585 DEFB132Q7Z7B7 95 aa1.16□□□□□ -2.22
SRGAP1-203ENST00000537585 C9orf62Q8N4C0 152 aa1.16□□□□□ -2.22
SRGAP1-203ENST00000537585 NPVFQ9HCQ7 196 aa1.16□□□□□ -2.22
SRGAP1-203ENST00000537585 MED14O60244 1454 aa1.16□□□□□ -2.22
SRGAP1-203ENST00000537585 PLEKHH2Q8IVE3 1493 aa1.16□□□□□ -2.22
SRGAP1-203ENST00000537585 GBF1Q92538 1859 aa1.16□□□□□ -2.22
SRGAP1-203ENST00000537585 EML5Q05BV3 1969 aa1.16□□□□□ -2.22
SRGAP1-203ENST00000537585 TNRC6AQ8NDV7 1962 aaKnown RBP1.16□□□□□ -2.22
SRGAP1-203ENST00000537585 ABCC5O15440 1437 aa1.15□□□□□ -2.22
SRGAP1-203ENST00000537585 PPIP5K1Q6PFW1 1433 aa1.15□□□□□ -2.22
SRGAP1-203ENST00000537585 TTC28Q96AY4 2481 aa1.15□□□□□ -2.22
SRGAP1-203ENST00000537585 MAPKBP1O60336 1514 aa1.15□□□□□ -2.22
SRGAP1-203ENST00000537585 ARHGAP5Q13017 1502 aa1.15□□□□□ -2.22
SRGAP1-203ENST00000537585 PTPRFP10586 1907 aa1.15□□□□□ -2.22
SRGAP1-203ENST00000537585 MYO9AB2RTY4 2548 aa1.15□□□□□ -2.23
SRGAP1-203ENST00000537585 H3BQ15 152 aa1.15□□□□□ -2.23
SRGAP1-203ENST00000537585 LYNX1P0DP58 116 aa1.15□□□□□ -2.23
SRGAP1-203ENST00000537585 ACYP2P14621 99 aa1.15□□□□□ -2.23
SRGAP1-203ENST00000537585 ASIPP42127 132 aa1.15□□□□□ -2.23
SRGAP1-203ENST00000537585 EFNA4P52798 201 aa1.15□□□□□ -2.23
SRGAP1-203ENST00000537585 TMEM170BQ5T4T1 132 aa1.15□□□□□ -2.23
SRGAP1-203ENST00000537585 MGST2Q99735 147 aa1.15□□□□□ -2.23
SRGAP1-203ENST00000537585 DYNLRB1Q9NP97 96 aa1.15□□□□□ -2.23
SRGAP1-203ENST00000537585 R4GMQ9 66 aa1.15□□□□□ -2.23
SRGAP1-203ENST00000537585 SHANK2Q9UPX8 1470 aa1.15□□□□□ -2.23
SRGAP1-203ENST00000537585 QRICH2Q9H0J4 1663 aa1.15□□□□□ -2.23
SRGAP1-203ENST00000537585 NAV3Q8IVL0 2385 aa1.15□□□□□ -2.23
SRGAP1-203ENST00000537585 BIRC6Q9NR09 4857 aa1.15□□□□□ -2.23
SRGAP1-203ENST00000537585 COL5A3P25940 1745 aaPredicted RBP1.15□□□□□ -2.23
SRGAP1-203ENST00000537585 LRRC7Q96NW7 1537 aa1.15□□□□□ -2.23
SRGAP1-203ENST00000537585 NSD3Q9BZ95 1437 aa1.15□□□□□ -2.23
SRGAP1-203ENST00000537585 WDFY4Q6ZS81 3184 aa1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 SPTBN4Q9H254 2564 aa1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 MDC1Q14676 2089 aaKnown RBP1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 MYH9P35579 1960 aaKnown RBP1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 VWDEQ8N2E2 1590 aa1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 ANKRD36BQ8N2N9 1353 aa1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 TRGV1A0A0A0MS02 117 aa1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 CLPSL1A2RUU4 121 aa1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 M0R3E3 92 aa1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 ATOX1O00244 68 aa1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 SFT2D2O95562 160 aa1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 LY6G6CO95867 125 aa1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 IGLC1P0CG04 106 aa1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 NXT2Q9NPJ8 142 aaKnown RBP1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 NDUFA4L2Q9NRX3 87 aa1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 TMEM14BQ9NUH8 114 aa1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 PRO1854Q9UHT4 67 aa1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 ARL2-SNX15V9GYD0 113 aa1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 KIAA1549LQ6ZVL6 1849 aa1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 REV3LO60673 3130 aa1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 RYR3Q15413 4870 aa1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 DNAH12Q6ZR08 3092 aa1.14□□□□□ -2.23
SRGAP1-203ENST00000537585 ROBO1Q9Y6N7 1651 aa1.13□□□□□ -2.23
SRGAP1-203ENST00000537585 CITO14578 2027 aa1.13□□□□□ -2.23
SRGAP1-203ENST00000537585 MUC2Q02817 5179 aa1.13□□□□□ -2.23
SRGAP1-203ENST00000537585 RELNP78509 3460 aa1.13□□□□□ -2.23
SRGAP1-203ENST00000537585 UQCRHLA0A096LP55 91 aa1.13□□□□□ -2.23
SRGAP1-203ENST00000537585 TRAV1-2A0A0B4J238 106 aa1.13□□□□□ -2.23
SRGAP1-203ENST00000537585 M0R135 149 aa1.13□□□□□ -2.23
SRGAP1-203ENST00000537585 HMGN4O00479 90 aa1.13□□□□□ -2.23
SRGAP1-203ENST00000537585 CYB5AP00167 134 aa1.13□□□□□ -2.23
SRGAP1-203ENST00000537585 PEA15Q15121 130 aa1.13□□□□□ -2.23
SRGAP1-203ENST00000537585 Q8N6K4 173 aa1.13□□□□□ -2.23
SRGAP1-203ENST00000537585 ALKQ9UM73 1620 aa1.13□□□□□ -2.23
SRGAP1-203ENST00000537585 MUC22E2RYF6 1773 aaPredicted RBP1.13□□□□□ -2.23
SRGAP1-203ENST00000537585 LAMB2P55268 1798 aa1.13□□□□□ -2.23
SRGAP1-203ENST00000537585 CTTNBP2Q8WZ74 1663 aa1.13□□□□□ -2.23
SRGAP1-203ENST00000537585 ASPMQ8IZT6 3477 aa1.13□□□□□ -2.23
SRGAP1-203ENST00000537585 JMJD1CQ15652 2540 aa1.13□□□□□ -2.23
SRGAP1-203ENST00000537585 RB1CC1Q8TDY2 1594 aa1.13□□□□□ -2.23
SRGAP1-203ENST00000537585 GAPVD1Q14C86 1478 aa1.12□□□□□ -2.23
SRGAP1-203ENST00000537585 HYDINQ4G0P3 5121 aa1.12□□□□□ -2.23
SRGAP1-203ENST00000537585 CR1P17927 2039 aa1.12□□□□□ -2.23
SRGAP1-203ENST00000537585 CHD3Q12873 2000 aaKnown RBP1.12□□□□□ -2.23
SRGAP1-203ENST00000537585 TRAV22A0A0B4J277 110 aa1.12□□□□□ -2.23
SRGAP1-203ENST00000537585 F2Z2F3 143 aa1.12□□□□□ -2.23
SRGAP1-203ENST00000537585 KLKP1Q107X0 134 aa1.12□□□□□ -2.23
SRGAP1-203ENST00000537585 LENEPQ9Y5L5 61 aa1.12□□□□□ -2.23
SRGAP1-203ENST00000537585 INTS1Q8N201 2190 aaKnown RBP1.12□□□□□ -2.23
SRGAP1-203ENST00000537585 NINQ8N4C6 2090 aa1.12□□□□□ -2.23
SRGAP1-203ENST00000537585 CFAP46Q8IYW2 2715 aa1.12□□□□□ -2.23
SRGAP1-203ENST00000537585 SIP14410 1827 aa1.12□□□□□ -2.23
SRGAP1-203ENST00000537585 SDK1Q7Z5N4 2213 aa1.12□□□□□ -2.23
SRGAP1-203ENST00000537585 NBEAL2Q6ZNJ1 2754 aa1.12□□□□□ -2.23
SRGAP1-203ENST00000537585 BCORL1Q5H9F3 1711 aa1.12□□□□□ -2.23
SRGAP1-203ENST00000537585 ZFHX3Q15911 3703 aa1.12□□□□□ -2.23
SRGAP1-203ENST00000537585 RAPGEF2Q9Y4G8 1499 aa1.12□□□□□ -2.23
SRGAP1-203ENST00000537585 STRCP1A6NGW2 1772 aa1.11□□□□□ -2.23
SRGAP1-203ENST00000537585 AKAP11Q9UKA4 1901 aa1.11□□□□□ -2.23
SRGAP1-203ENST00000537585 COL6A5A8TX70 2615 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms