RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 DYNLRB2Q8TF09 96 aa10.43□□□□□ -0.74
USP44-203ENST00000537435 FAM208BQ5VWN6 2430 aa10.43□□□□□ -0.74
USP44-203ENST00000537435 TRBV20-1A0A075B6N2 111 aa10.42□□□□□ -0.74
USP44-203ENST00000537435 SCGB1C2P0DMR2 95 aa10.42□□□□□ -0.74
USP44-203ENST00000537435 SMAGPQ0VAQ4 97 aa10.42□□□□□ -0.74
USP44-203ENST00000537435 C4orf3Q8WVX3 66 aa10.42□□□□□ -0.74
USP44-203ENST00000537435 LINC01587Q99440 93 aa10.42□□□□□ -0.74
USP44-203ENST00000537435 PIK3CD-AS1Q5SR53 167 aa10.42□□□□□ -0.74
USP44-203ENST00000537435 PTH2Q96A98 100 aa10.42□□□□□ -0.74
USP44-203ENST00000537435 RAX2Q96IS3 184 aa10.42□□□□□ -0.74
USP44-203ENST00000537435 CHCHD7Q9BUK0 85 aa10.42□□□□□ -0.74
USP44-203ENST00000537435 TIMM21Q9BVV7 248 aa10.42□□□□□ -0.74
USP44-203ENST00000537435 A0A0J9YXY3 114 aa10.41□□□□□ -0.74
USP44-203ENST00000537435 ADARB2-AS1A8MUL3 147 aa10.41□□□□□ -0.74
USP44-203ENST00000537435 CRYBA4P53673 196 aa10.41□□□□□ -0.74
USP44-203ENST00000537435 TRAV8-3A0A0A6YYJ7 113 aa10.41□□□□□ -0.74
USP44-203ENST00000537435 C11orf72Q8NBR9 251 aa10.41□□□□□ -0.74
USP44-203ENST00000537435 TMEM263Q8WUH6 116 aaKnown RBP10.41□□□□□ -0.74
USP44-203ENST00000537435 CR1P17927 2039 aa10.41□□□□□ -0.74
USP44-203ENST00000537435 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.4□□□□□ -0.74
USP44-203ENST00000537435 IGKV2-29A2NJV5 120 aaPredicted RBP10.4□□□□□ -0.74
USP44-203ENST00000537435 UBE2D4Q9Y2X8 147 aa10.4□□□□□ -0.74
USP44-203ENST00000537435 MXRA5Q9NR99 2828 aa10.4□□□□□ -0.74
USP44-203ENST00000537435 A0A0B4J2C4 111 aa10.4□□□□□ -0.75
USP44-203ENST00000537435 IGHV3-38A0A0C4DH36 116 aa10.4□□□□□ -0.75
USP44-203ENST00000537435 IGHV3-33P01772 117 aa10.4□□□□□ -0.75
USP44-203ENST00000537435 DEFB114Q30KQ6 69 aa10.4□□□□□ -0.75
USP44-203ENST00000537435 DEFB113Q30KQ7 82 aa10.4□□□□□ -0.75
USP44-203ENST00000537435 SPANXA1Q9NS26 97 aa10.39□□□□□ -0.75
USP44-203ENST00000537435 IGHV1-58A0A0C4DH39 117 aa10.39□□□□□ -0.75
USP44-203ENST00000537435 H7C2G1 150 aa10.39□□□□□ -0.75
USP44-203ENST00000537435 ERG28Q9UKR5 140 aa10.39□□□□□ -0.75
USP44-203ENST00000537435 NACAE9PAV3 2078 aa10.38□□□□□ -0.75
USP44-203ENST00000537435 INSP01308 110 aa10.38□□□□□ -0.75
USP44-203ENST00000537435 IGHV3-53P01767 116 aa10.38□□□□□ -0.75
USP44-203ENST00000537435 Q96MF0 132 aa10.38□□□□□ -0.75
USP44-203ENST00000537435 BBC3Q96PG8 261 aaPredicted RBP10.38□□□□□ -0.75
USP44-203ENST00000537435 LINC00467Q9BRT7 94 aa10.38□□□□□ -0.75
USP44-203ENST00000537435 PTPN13Q12923 2485 aa10.38□□□□□ -0.75
USP44-203ENST00000537435 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.38□□□□□ -0.75
USP44-203ENST00000537435 TINCRA0A1B0GVN0 87 aa10.38□□□□□ -0.75
USP44-203ENST00000537435 SCGB1A1P11684 91 aa10.38□□□□□ -0.75
USP44-203ENST00000537435 Q6ZUT4 128 aa10.38□□□□□ -0.75
USP44-203ENST00000537435 SBSPONQ8IVN8 264 aa10.38□□□□□ -0.75
USP44-203ENST00000537435 PRRC2AP48634 2157 aaKnown RBP10.37□□□□□ -0.75
USP44-203ENST00000537435 TEN1Q86WV5 123 aa10.37□□□□□ -0.75
USP44-203ENST00000537435 LITAFQ99732 161 aa10.37□□□□□ -0.75
USP44-203ENST00000537435 BEAN1Q3B7T3 259 aa10.36□□□□□ -0.75
USP44-203ENST00000537435 DNAJC30Q96LL9 226 aa10.36□□□□□ -0.75
USP44-203ENST00000537435 CARD19Q96LW7 228 aa10.36□□□□□ -0.75
USP44-203ENST00000537435 NDUFA12Q9UI09 145 aa10.36□□□□□ -0.75
USP44-203ENST00000537435 ZNF462Q96JM2 2506 aa10.36□□□□□ -0.75
USP44-203ENST00000537435 A8MZ25 164 aa10.36□□□□□ -0.75
USP44-203ENST00000537435 RS1O15537 224 aa10.36□□□□□ -0.75
USP44-203ENST00000537435 SPINK8P0C7L1 97 aa10.36□□□□□ -0.75
USP44-203ENST00000537435 PPDPFLQ8WWR9 84 aa10.36□□□□□ -0.75
USP44-203ENST00000537435 XCL2Q9UBD3 114 aa10.36□□□□□ -0.75
USP44-203ENST00000537435 Q1RN00 199 aa10.35□□□□□ -0.75
USP44-203ENST00000537435 VSIG2Q96IQ7 327 aa10.35□□□□□ -0.75
USP44-203ENST00000537435 NAV2Q8IVL1 2488 aa10.35□□□□□ -0.75
USP44-203ENST00000537435 LRRC75A-AS1Q8N1F1 130 aa10.35□□□□□ -0.75
USP44-203ENST00000537435 LRRK2Q5S007 2527 aa10.35□□□□□ -0.75
USP44-203ENST00000537435 PRSS2P07478 247 aa10.34□□□□□ -0.75
USP44-203ENST00000537435 ODF3L2Q3SX64 289 aa10.34□□□□□ -0.75
USP44-203ENST00000537435 ZFYVE26Q68DK2 2539 aa10.34□□□□□ -0.75
USP44-203ENST00000537435 ADAMTSL4-AS1Q5T5F5 129 aa10.34□□□□□ -0.75
USP44-203ENST00000537435 Q6ZSV7 163 aa10.34□□□□□ -0.75
USP44-203ENST00000537435 ANKRD29Q8N6D5 301 aa10.34□□□□□ -0.75
USP44-203ENST00000537435 CDIP1Q9H305 208 aa10.34□□□□□ -0.75
USP44-203ENST00000537435 GEMIN7Q9H840 131 aaKnown RBP10.34□□□□□ -0.75
USP44-203ENST00000537435 CENPEQ02224 2701 aa10.34□□□□□ -0.75
USP44-203ENST00000537435 IGHV3OR16-12A0A075B7B8 117 aa10.33□□□□□ -0.76
USP44-203ENST00000537435 C9JAW5 83 aa10.33□□□□□ -0.76
USP44-203ENST00000537435 SLC25A20O43772 301 aa10.33□□□□□ -0.76
USP44-203ENST00000537435 FHL3Q13643 280 aa10.33□□□□□ -0.76
USP44-203ENST00000537435 SPANXDQ9BXN6 97 aa10.33□□□□□ -0.76
USP44-203ENST00000537435 SPANXCQ9NY87 97 aa10.33□□□□□ -0.76
USP44-203ENST00000537435 STHQ8IWL8 128 aa10.32□□□□□ -0.76
USP44-203ENST00000537435 C11orf44Q8N8P7 122 aa10.32□□□□□ -0.76
USP44-203ENST00000537435 KRTAP1-3Q8IUG1 177 aa10.32□□□□□ -0.76
USP44-203ENST00000537435 C1orf158Q8N1D5 194 aa10.32□□□□□ -0.76
USP44-203ENST00000537435 ZNF843Q8N446 348 aa10.32□□□□□ -0.76
USP44-203ENST00000537435 TEX15Q9BXT5 2789 aa10.32□□□□□ -0.76
USP44-203ENST00000537435 MYO9AB2RTY4 2548 aa10.32□□□□□ -0.76
USP44-203ENST00000537435 ZFAND6Q6FIF0 208 aa10.31□□□□□ -0.76
USP44-203ENST00000537435 CLUHP3Q96NS8 147 aa10.31□□□□□ -0.76
USP44-203ENST00000537435 CDKN2A-AS1Q9UH64 79 aa10.31□□□□□ -0.76
USP44-203ENST00000537435 ABCA12Q86UK0 2595 aa10.31□□□□□ -0.76
USP44-203ENST00000537435 A0A1W2PRX2 142 aa10.31□□□□□ -0.76
USP44-203ENST00000537435 NPC2P61916 151 aa10.31□□□□□ -0.76
USP44-203ENST00000537435 MIAQ16674 131 aa10.31□□□□□ -0.76
USP44-203ENST00000537435 TRGV1A0A0A0MS02 117 aa10.3□□□□□ -0.76
USP44-203ENST00000537435 DGAT2L7PQ6IED9 249 aa10.3□□□□□ -0.76
USP44-203ENST00000537435 TMEM86BQ8N661 226 aa10.3□□□□□ -0.76
USP44-203ENST00000537435 TRIAP1O43715 76 aa10.3□□□□□ -0.76
USP44-203ENST00000537435 ATXN8Q156A1 80 aa10.3□□□□□ -0.76
USP44-203ENST00000537435 TRAV25A0A0B4J276 109 aa10.29□□□□□ -0.76
USP44-203ENST00000537435 TRBV30A0A0K0K1B3 111 aa10.29□□□□□ -0.76
USP44-203ENST00000537435 TIRAPP58753 221 aa10.29□□□□□ -0.76
USP44-203ENST00000537435 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms