RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 F5H697 171 aa11.55□□□□□ -0.56
CHFR-213ENST00000536843 SOCS3O14543 225 aa11.55□□□□□ -0.56
CHFR-213ENST00000536843 PRB1P04280 392 aa11.55□□□□□ -0.56
CHFR-213ENST00000536843 RPS28P62857 69 aaKnown RBP11.55□□□□□ -0.56
CHFR-213ENST00000536843 TMEM219Q86XT9 240 aa11.55□□□□□ -0.56
CHFR-213ENST00000536843 ZNF843Q8N446 348 aa11.55□□□□□ -0.56
CHFR-213ENST00000536843 TIMM21Q9BVV7 248 aa11.55□□□□□ -0.56
CHFR-213ENST00000536843 CXCL5P42830 114 aa11.54□□□□□ -0.56
CHFR-213ENST00000536843 FAM19A5Q7Z5A7 132 aaPredicted RBP11.54□□□□□ -0.56
CHFR-213ENST00000536843 SPXQ9BT56 116 aa11.54□□□□□ -0.56
CHFR-213ENST00000536843 MUC4Q99102 2169 aa11.54□□□□□ -0.56
CHFR-213ENST00000536843 IGLV4-3A0A075B6K6 122 aa11.54□□□□□ -0.56
CHFR-213ENST00000536843 A0A087WWL8 130 aa11.54□□□□□ -0.56
CHFR-213ENST00000536843 TRAV8-3A0A0A6YYJ7 113 aa11.54□□□□□ -0.56
CHFR-213ENST00000536843 ADARB2-AS1A8MUL3 147 aa11.54□□□□□ -0.56
CHFR-213ENST00000536843 Q6ZSV7 163 aa11.54□□□□□ -0.56
CHFR-213ENST00000536843 C5orf56Q8N8D9 126 aa11.54□□□□□ -0.56
CHFR-213ENST00000536843 C20orf203Q8NBC4 194 aa11.54□□□□□ -0.56
CHFR-213ENST00000536843 COX7CP15954 63 aa11.53□□□□□ -0.56
CHFR-213ENST00000536843 WIPF1O43516 503 aa11.52□□□□□ -0.56
CHFR-213ENST00000536843 C5orf38Q86SI9 138 aa11.52□□□□□ -0.56
CHFR-213ENST00000536843 EPG5Q9HCE0 2579 aa11.52□□□□□ -0.57
CHFR-213ENST00000536843 CRYGAP11844 174 aa11.52□□□□□ -0.57
CHFR-213ENST00000536843 MAP1AP78559 2803 aaPredicted RBP11.52□□□□□ -0.57
CHFR-213ENST00000536843 IGHV4-61A0A0C4DH41 118 aa11.51□□□□□ -0.57
CHFR-213ENST00000536843 NDUFA12Q9UI09 145 aa11.51□□□□□ -0.57
CHFR-213ENST00000536843 KLK5Q9Y337 293 aaPredicted RBP11.51□□□□□ -0.57
CHFR-213ENST00000536843 ZFYVE26Q68DK2 2539 aa11.51□□□□□ -0.57
CHFR-213ENST00000536843 IGHV1-58A0A0C4DH39 117 aa11.51□□□□□ -0.57
CHFR-213ENST00000536843 DEFB1P60022 68 aa11.51□□□□□ -0.57
CHFR-213ENST00000536843 BRD3OSQ6XYD6 125 aa11.51□□□□□ -0.57
CHFR-213ENST00000536843 M0QY20 66 aa11.5□□□□□ -0.57
CHFR-213ENST00000536843 MRPS36P82909 103 aaKnown RBP11.5□□□□□ -0.57
CHFR-213ENST00000536843 C2orf48Q96LS8 159 aa11.5□□□□□ -0.57
CHFR-213ENST00000536843 PEMTQ9UBM1 199 aa11.49□□□□□ -0.57
CHFR-213ENST00000536843 MOB4Q9Y3A3 225 aa11.49□□□□□ -0.57
CHFR-213ENST00000536843 KLLNB2CW77 178 aa11.49□□□□□ -0.57
CHFR-213ENST00000536843 TIMM17BO60830 172 aa11.49□□□□□ -0.57
CHFR-213ENST00000536843 ABCA2Q9BZC7 2435 aa11.48□□□□□ -0.57
CHFR-213ENST00000536843 TRAV41A0A0B4J266 112 aa11.48□□□□□ -0.57
CHFR-213ENST00000536843 HIST1H4AP62805 103 aaKnown RBP11.48□□□□□ -0.57
CHFR-213ENST00000536843 GAGE2AQ6NT46 116 aa11.48□□□□□ -0.57
CHFR-213ENST00000536843 PIMREGQ9BSJ6 248 aa11.48□□□□□ -0.57
CHFR-213ENST00000536843 OR13C6PQ8NH95 151 aa11.48□□□□□ -0.57
CHFR-213ENST00000536843 CCL19Q99731 98 aa11.48□□□□□ -0.57
CHFR-213ENST00000536843 PYGO1Q9Y3Y4 419 aa11.48□□□□□ -0.57
CHFR-213ENST00000536843 F6UB75 175 aa11.47□□□□□ -0.57
CHFR-213ENST00000536843 RPL11P62913 178 aaKnown RBP11.47□□□□□ -0.57
CHFR-213ENST00000536843 C19orf54Q5BKX5 351 aa11.47□□□□□ -0.57
CHFR-213ENST00000536843 FAM74A4Q5TZK3 123 aa11.47□□□□□ -0.57
CHFR-213ENST00000536843 C10orf105Q8TEF2 133 aa11.47□□□□□ -0.57
CHFR-213ENST00000536843 VSIG2Q96IQ7 327 aa11.47□□□□□ -0.57
CHFR-213ENST00000536843 DUX5Q96PT3 197 aa11.47□□□□□ -0.57
CHFR-213ENST00000536843 IGHV4-38-2P0DP08 117 aa11.46□□□□□ -0.57
CHFR-213ENST00000536843 NPC2P61916 151 aa11.46□□□□□ -0.57
CHFR-213ENST00000536843 COX7A2LO14548 114 aa11.46□□□□□ -0.58
CHFR-213ENST00000536843 LY6EQ16553 131 aa11.46□□□□□ -0.58
CHFR-213ENST00000536843 DAND5Q8N907 189 aa11.46□□□□□ -0.58
CHFR-213ENST00000536843 FAM104AQ969W3 186 aa11.46□□□□□ -0.58
CHFR-213ENST00000536843 CITED2Q99967 270 aaPredicted RBP11.46□□□□□ -0.58
CHFR-213ENST00000536843 CELSR1Q9NYQ6 3014 aa11.45□□□□□ -0.58
CHFR-213ENST00000536843 ZFHX3Q15911 3703 aa11.45□□□□□ -0.58
CHFR-213ENST00000536843 ATOX1O00244 68 aa11.45□□□□□ -0.58
CHFR-213ENST00000536843 C9orf85Q96MD7 179 aa11.45□□□□□ -0.58
CHFR-213ENST00000536843 ZNF462Q96JM2 2506 aa11.45□□□□□ -0.58
CHFR-213ENST00000536843 VPS13CQ709C8 3753 aa11.45□□□□□ -0.58
CHFR-213ENST00000536843 DOPEY1Q5JWR5 2465 aa11.44□□□□□ -0.58
CHFR-213ENST00000536843 IGHV4-30-2A0A087WSY4 118 aa11.44□□□□□ -0.58
CHFR-213ENST00000536843 CD28P10747 220 aa11.44□□□□□ -0.58
CHFR-213ENST00000536843 EDA2RQ9HAV5 297 aa11.44□□□□□ -0.58
CHFR-213ENST00000536843 TRAV25A0A0B4J276 109 aa11.44□□□□□ -0.58
CHFR-213ENST00000536843 DAZ2Q13117 558 aaKnown RBP11.44□□□□□ -0.58
CHFR-213ENST00000536843 DAZ4Q86SG3 579 aaKnown RBP11.44□□□□□ -0.58
CHFR-213ENST00000536843 DAZ1Q9NQZ3 744 aaKnown RBP11.44□□□□□ -0.58
CHFR-213ENST00000536843 DAZ3Q9NR90 486 aaKnown RBP11.44□□□□□ -0.58
CHFR-213ENST00000536843 FAM223BA6NKX1 122 aa11.43□□□□□ -0.58
CHFR-213ENST00000536843 UNQ9165/PRO28630Q6UXU0 137 aa11.43□□□□□ -0.58
CHFR-213ENST00000536843 FAM223AQ8IWN6 122 aa11.43□□□□□ -0.58
CHFR-213ENST00000536843 TINCRA0A1B0GVN0 87 aa11.43□□□□□ -0.58
CHFR-213ENST00000536843 TRBV12-3P01733 135 aa11.43□□□□□ -0.58
CHFR-213ENST00000536843 BEAN1Q3B7T3 259 aa11.43□□□□□ -0.58
CHFR-213ENST00000536843 PRRC2AP48634 2157 aaKnown RBP11.42□□□□□ -0.58
CHFR-213ENST00000536843 FLNCQ14315 2725 aa11.42□□□□□ -0.58
CHFR-213ENST00000536843 IGHV3-16A0A0C4DH30 117 aa11.42□□□□□ -0.58
CHFR-213ENST00000536843 TRACP01848 142 aa11.42□□□□□ -0.58
CHFR-213ENST00000536843 MYO18BQ8IUG5 2567 aa11.42□□□□□ -0.58
CHFR-213ENST00000536843 NDUFA4O00483 81 aa11.41□□□□□ -0.58
CHFR-213ENST00000536843 FAM222AQ5U5X8 452 aa11.41□□□□□ -0.58
CHFR-213ENST00000536843 H3BUX3 64 aa11.41□□□□□ -0.58
CHFR-213ENST00000536843 USP9XQ93008 2570 aaPredicted RBP11.41□□□□□ -0.58
CHFR-213ENST00000536843 hADV29S1A0JD25 119 aa11.4□□□□□ -0.58
CHFR-213ENST00000536843 C22orf24Q9Y442 160 aa11.4□□□□□ -0.58
CHFR-213ENST00000536843 A6NDX4 124 aa11.4□□□□□ -0.58
CHFR-213ENST00000536843 A8MZ25 164 aa11.4□□□□□ -0.58
CHFR-213ENST00000536843 INAFM2P0DMQ5 153 aa11.4□□□□□ -0.58
CHFR-213ENST00000536843 TIRAPP58753 221 aa11.4□□□□□ -0.58
CHFR-213ENST00000536843 TMEM258P61165 79 aa11.4□□□□□ -0.58
CHFR-213ENST00000536843 BLCAPP62952 87 aa11.39□□□□□ -0.59
CHFR-213ENST00000536843 SPG11Q96JI7 2443 aa11.39□□□□□ -0.59
CHFR-213ENST00000536843 TRAV12-3A0A0B4J271 114 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms