RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 TMEM61Q8N0U2 210 aa2.25□□□□□ -2.05
USP48-215ENST00000534705 FAM216BQ8N7L0 139 aa2.25□□□□□ -2.05
USP48-215ENST00000534705 LY6G5BQ8NDX9 201 aa2.25□□□□□ -2.05
USP48-215ENST00000534705 PPDPFLQ8WWR9 84 aa2.25□□□□□ -2.05
USP48-215ENST00000534705 FAM19A4Q96LR4 140 aa2.25□□□□□ -2.05
USP48-215ENST00000534705 CCL13Q99616 98 aa2.25□□□□□ -2.05
USP48-215ENST00000534705 HDHD3Q9BSH5 251 aaPredicted RBP2.25□□□□□ -2.05
USP48-215ENST00000534705 NPCDR1Q9BY65 106 aa2.25□□□□□ -2.05
USP48-215ENST00000534705 YTHDF2Q9Y5A9 579 aaKnown RBP2.25□□□□□ -2.05
USP48-215ENST00000534705 TRBV7-3A0A075B6L6 115 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 TRAV40A0A0B4J280 105 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 IGHV1-69DA0A0B4J2H0 117 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 IGKV1-12A0A0C4DH73 117 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 GGTLC3B5MD39 225 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 H3BSH0 61 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 PANO1I0J062 215 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 M0R2P5 195 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 PSPHP1O15172 72 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 ZNF861PO60384 105 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 PDCD6O75340 191 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 PGLYRP1O75594 196 aaPredicted RBP2.24□□□□□ -2.05
USP48-215ENST00000534705 LEPROTL1O95214 131 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 IGKV1D-12P01611 117 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 NTF3P20783 257 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 GCHFRP30047 84 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 NMUP48645 174 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 FOXA3P55318 350 aaPredicted RBP2.24□□□□□ -2.05
USP48-215ENST00000534705 FGF12P61328 243 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 CACNG7P62955 275 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 EIF4EBP1Q13541 118 aaPredicted RBP2.24□□□□□ -2.05
USP48-215ENST00000534705 IBA57Q5T440 356 aaKnown RBP2.24□□□□□ -2.05
USP48-215ENST00000534705 CASC10Q5T4H9 136 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 MORN3Q6PF18 240 aaPredicted RBP2.24□□□□□ -2.05
USP48-215ENST00000534705 AMTNQ6UX39 209 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 CLEC19AQ6UXS0 136 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 ZNF818PQ6ZRF7 136 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 C6orf201Q7Z4U5 140 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 TEX29Q8N6K0 151 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 NUP35Q8NFH5 326 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 OR11H6Q8NGC7 330 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 TMEM101Q96IK0 257 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 METTL26Q96S19 204 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 RTL8AQ9BWD3 113 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 SLC25A2Q9BXI2 301 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 EDA2RQ9HAV5 297 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 CCL28Q9NRJ3 127 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 PSENENQ9NZ42 101 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 RPUSD1Q9UJJ7 312 aaKnown RBP2.24□□□□□ -2.05
USP48-215ENST00000534705 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
USP48-215ENST00000534705 MGAM2Q2M2H8 2515 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 TRAV8-2A0A0B4J237 113 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 IGKV1-6A0A0C4DH72 117 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 A0A0J9YXV3 536 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 A0A0U1RQV1 116 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 ANGPTL7O43827 346 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 NDUFS5O43920 106 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 APOMO95445 188 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 SCTP09683 121 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 ZNF688P0C7X2 276 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 CHTF8P0CG12 524 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 IFITM1P13164 125 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 ORM2P19652 201 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 HLA-DMBP28068 263 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 G6PCP35575 357 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 TAS2R45P59539 299 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 PRB3Q04118 309 aaPredicted RBP2.23□□□□□ -2.05
USP48-215ENST00000534705 EBI3Q14213 229 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 DEFB112Q30KQ8 113 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 C12orf74Q32Q52 190 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 DEFB121Q5J5C9 76 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 BRD3OSQ6XYD6 125 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 SDIM1Q6ZPB5 146 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 VMO1Q7Z5L0 202 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 C11orf72Q8NBR9 251 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 OR51H1Q8NH63 302 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 RNF185Q96GF1 192 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 ODF3Q96PU9 254 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 SPACA5Q96QH8 159 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 NAA38Q9BRA0 125 aaKnown RBP2.23□□□□□ -2.05
USP48-215ENST00000534705 IMUPQ9GZP8 106 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 PRO0628Q9UI54 55 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 HHLA3Q9XRX5 114 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 HILPDAQ9Y5L2 63 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 U3KQK5 164 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 NOTCH1P46531 2555 aa2.23□□□□□ -2.05
USP48-215ENST00000534705 SORL1Q92673 2214 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 COL7A1Q02388 2944 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 TRAV4A0A0B4J268 109 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 UBE2L5PA0A1B0GUS4 154 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 C19orf71A6NCJ1 209 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 C17orf98A8MV24 154 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 ODF3BA8MYP8 253 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 J3KT08 172 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 M0R1W7 72 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 HMGB3O15347 200 aaKnown RBP2.22□□□□□ -2.05
USP48-215ENST00000534705 NDUFB3O43676 98 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 NCR2O95944 276 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 IGHV1-69P01742 117 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 ARL14EPLP0DKL9 152 aa2.22□□□□□ -2.05
USP48-215ENST00000534705 CGB3P0DN86 165 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms