RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 CACNG7P62955 275 aa8.24□□□□□ -1.09
CAPN1-223ENST00000533079 PRR9Q5T870 116 aa8.24□□□□□ -1.09
CAPN1-223ENST00000533079 KCNS1Q96KK3 526 aa8.24□□□□□ -1.09
CAPN1-223ENST00000533079 SPXQ9BT56 116 aa8.24□□□□□ -1.09
CAPN1-223ENST00000533079 TMSB15BA0A087X1C1 80 aa8.23□□□□□ -1.09
CAPN1-223ENST00000533079 TRAV4A0A0B4J268 109 aa8.23□□□□□ -1.09
CAPN1-223ENST00000533079 ALKBH7Q9BT30 221 aaPredicted RBP8.23□□□□□ -1.09
CAPN1-223ENST00000533079 TMEM191AQ9H0A3 160 aa8.23□□□□□ -1.09
CAPN1-223ENST00000533079 IFITM10A6NMD0 228 aa8.22□□□□□ -1.09
CAPN1-223ENST00000533079 FAM104BQ5XKR9 115 aa8.22□□□□□ -1.09
CAPN1-223ENST00000533079 CHAC1Q9BUX1 264 aa8.22□□□□□ -1.09
CAPN1-223ENST00000533079 TRGV11A0A075B6L2 103 aa8.21□□□□□ -1.1
CAPN1-223ENST00000533079 NTF3P20783 257 aa8.21□□□□□ -1.1
CAPN1-223ENST00000533079 S100A2P29034 98 aa8.21□□□□□ -1.1
CAPN1-223ENST00000533079 TRAV8-3A0A0A6YYJ7 113 aa8.2□□□□□ -1.1
CAPN1-223ENST00000533079 GRIFINA4D1Z8 144 aa8.2□□□□□ -1.1
CAPN1-223ENST00000533079 PPBPP02775 128 aa8.2□□□□□ -1.1
CAPN1-223ENST00000533079 ASIPP42127 132 aa8.2□□□□□ -1.1
CAPN1-223ENST00000533079 TWIST1Q15672 202 aa8.2□□□□□ -1.1
CAPN1-223ENST00000533079 KIAA1644Q3SXP7 199 aa8.2□□□□□ -1.1
CAPN1-223ENST00000533079 FAM159AQ6UWV7 190 aa8.2□□□□□ -1.1
CAPN1-223ENST00000533079 BAGE3Q86Y29 109 aa8.2□□□□□ -1.1
CAPN1-223ENST00000533079 OR4C5Q8NGB2 326 aa8.2□□□□□ -1.1
CAPN1-223ENST00000533079 C18orf32Q8TCD1 76 aa8.2□□□□□ -1.1
CAPN1-223ENST00000533079 TMEM18Q96B42 140 aa8.2□□□□□ -1.1
CAPN1-223ENST00000533079 TPPP3Q9BW30 176 aa8.2□□□□□ -1.1
CAPN1-223ENST00000533079 COX11Q9Y6N1 276 aa8.2□□□□□ -1.1
CAPN1-223ENST00000533079 WFDC2Q14508 124 aa8.19□□□□□ -1.1
CAPN1-223ENST00000533079 LELP1Q5T871 98 aa8.19□□□□□ -1.1
CAPN1-223ENST00000533079 HIST1H2BLQ99880 126 aa8.19□□□□□ -1.1
CAPN1-223ENST00000533079 LAMTOR2Q9Y2Q5 125 aa8.19□□□□□ -1.1
CAPN1-223ENST00000533079 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.18□□□□□ -1.1
CAPN1-223ENST00000533079 LOC100131303A0A0U1RQF7 123 aa8.18□□□□□ -1.1
CAPN1-223ENST00000533079 CIDEAO60543 219 aa8.18□□□□□ -1.1
CAPN1-223ENST00000533079 IGHV3-30P01768 117 aa8.18□□□□□ -1.1
CAPN1-223ENST00000533079 IGHV3-33P01772 117 aa8.18□□□□□ -1.1
CAPN1-223ENST00000533079 IGHV3-30-3P0DP02 117 aa8.18□□□□□ -1.1
CAPN1-223ENST00000533079 IGHV3-30-5P0DP03 117 aa8.18□□□□□ -1.1
CAPN1-223ENST00000533079 GATA1P15976 413 aaPredicted RBP8.18□□□□□ -1.1
CAPN1-223ENST00000533079 AKR1D1P51857 326 aa8.18□□□□□ -1.1
CAPN1-223ENST00000533079 LINC00310P59036 64 aa8.18□□□□□ -1.1
CAPN1-223ENST00000533079 Q6ZQT7 251 aa8.18□□□□□ -1.1
CAPN1-223ENST00000533079 SMIM15Q7Z3B0 74 aa8.18□□□□□ -1.1
CAPN1-223ENST00000533079 LINC00518Q8N0U6 118 aa8.18□□□□□ -1.1
CAPN1-223ENST00000533079 CIRBP-AS1Q8TBR5 109 aa8.18□□□□□ -1.1
CAPN1-223ENST00000533079 M0R2P5 195 aa8.17□□□□□ -1.1
CAPN1-223ENST00000533079 NUPR1O60356 82 aa8.17□□□□□ -1.1
CAPN1-223ENST00000533079 SMIM6P0DI80 62 aa8.17□□□□□ -1.1
CAPN1-223ENST00000533079 RNASE3P12724 160 aaKnown RBP8.17□□□□□ -1.1
CAPN1-223ENST00000533079 RAB4AP20338 218 aa8.17□□□□□ -1.1
CAPN1-223ENST00000533079 S100A4P26447 101 aaKnown RBP8.17□□□□□ -1.1
CAPN1-223ENST00000533079 RHOHQ15669 191 aa8.17□□□□□ -1.1
CAPN1-223ENST00000533079 MUC21Q5SSG8 566 aa8.17□□□□□ -1.1
CAPN1-223ENST00000533079 ATP6V0E2Q8NHE4 81 aa8.17□□□□□ -1.1
CAPN1-223ENST00000533079 CHCHD1Q96BP2 118 aaKnown RBP8.17□□□□□ -1.1
CAPN1-223ENST00000533079 IGHV3-16A0A0C4DH30 117 aa8.16□□□□□ -1.1
CAPN1-223ENST00000533079 TRBV6-4A0A1B0GX49 114 aa8.16□□□□□ -1.1
CAPN1-223ENST00000533079 GNRH2O43555 120 aa8.16□□□□□ -1.1
CAPN1-223ENST00000533079 SERF1AO75920 110 aa8.16□□□□□ -1.1
CAPN1-223ENST00000533079 FABP4P15090 132 aa8.16□□□□□ -1.1
CAPN1-223ENST00000533079 PMCHP20382 165 aa8.16□□□□□ -1.1
CAPN1-223ENST00000533079 MRPL51Q4U2R6 128 aaKnown RBP8.16□□□□□ -1.1
CAPN1-223ENST00000533079 PIK3CD-AS1Q5SR53 167 aa8.16□□□□□ -1.1
CAPN1-223ENST00000533079 SPANXN1Q5VSR9 72 aa8.16□□□□□ -1.1
CAPN1-223ENST00000533079 ORMDL3Q8N138 153 aa8.16□□□□□ -1.1
CAPN1-223ENST00000533079 Q8N976 141 aa8.16□□□□□ -1.1
CAPN1-223ENST00000533079 OR10AG1Q8NH19 301 aa8.16□□□□□ -1.1
CAPN1-223ENST00000533079 PTH2Q96A98 100 aa8.16□□□□□ -1.1
CAPN1-223ENST00000533079 RNF185Q96GF1 192 aa8.16□□□□□ -1.1
CAPN1-223ENST00000533079 C9orf85Q96MD7 179 aa8.16□□□□□ -1.1
CAPN1-223ENST00000533079 PRADC1Q9BSG0 188 aa8.16□□□□□ -1.1
CAPN1-223ENST00000533079 NAGKQ9UJ70 344 aa8.16□□□□□ -1.1
CAPN1-223ENST00000533079 PHLDA3Q9Y5J5 127 aa8.16□□□□□ -1.1
CAPN1-223ENST00000533079 PRSS47A8MTI9 375 aa8.15□□□□□ -1.1
CAPN1-223ENST00000533079 H3BVH4 76 aa8.15□□□□□ -1.1
CAPN1-223ENST00000533079 LECT2O14960 151 aa8.15□□□□□ -1.1
CAPN1-223ENST00000533079 RPL37AP61513 92 aaKnown RBP8.15□□□□□ -1.1
CAPN1-223ENST00000533079 NIT1Q86X76 327 aa8.15□□□□□ -1.1
CAPN1-223ENST00000533079 AMN1Q8IY45 258 aa8.15□□□□□ -1.1
CAPN1-223ENST00000533079 OR10D4PQ8NGN7 298 aa8.15□□□□□ -1.1
CAPN1-223ENST00000533079 RMI2Q96E14 147 aa8.15□□□□□ -1.1
CAPN1-223ENST00000533079 GTSF1LQ9H1H1 148 aa8.15□□□□□ -1.1
CAPN1-223ENST00000533079 PKHD1L1Q86WI1 4243 aa8.14□□□□□ -1.11
CAPN1-223ENST00000533079 LINC00614P0C842 121 aa8.14□□□□□ -1.11
CAPN1-223ENST00000533079 PDZD11Q5EBL8 140 aa8.14□□□□□ -1.11
CAPN1-223ENST00000533079 SLC25A29Q8N8R3 303 aa8.14□□□□□ -1.11
CAPN1-223ENST00000533079 PRELID3AQ96N28 172 aa8.14□□□□□ -1.11
CAPN1-223ENST00000533079 LINC01546A6NGU7 62 aa8.13□□□□□ -1.11
CAPN1-223ENST00000533079 CKS2P33552 79 aa8.13□□□□□ -1.11
CAPN1-223ENST00000533079 JOSD1Q15040 202 aaPredicted RBP8.13□□□□□ -1.11
CAPN1-223ENST00000533079 LINC01620Q4KN68 170 aa8.13□□□□□ -1.11
CAPN1-223ENST00000533079 MRAP2Q96G30 205 aa8.13□□□□□ -1.11
CAPN1-223ENST00000533079 MUC21A0A0G2JKD1 596 aa8.12□□□□□ -1.11
CAPN1-223ENST00000533079 MUC21A0A140T8X8 626 aa8.12□□□□□ -1.11
CAPN1-223ENST00000533079 D6R8Y8 96 aa8.12□□□□□ -1.11
CAPN1-223ENST00000533079 PPP1R17O96001 155 aa8.12□□□□□ -1.11
CAPN1-223ENST00000533079 URB1-AS1Q96HZ7 61 aa8.12□□□□□ -1.11
CAPN1-223ENST00000533079 DPH3P1Q9H4G8 78 aa8.12□□□□□ -1.11
CAPN1-223ENST00000533079 KIF25-AS1Q9Y6Z4 181 aa8.12□□□□□ -1.11
CAPN1-223ENST00000533079 RNF213Q63HN8 5207 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms