RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 GNG4P50150 75 aa5.64□□□□□ -1.51
USF1-210ENST00000531842 CIRBPQ14011 172 aaKnown RBP5.64□□□□□ -1.51
USF1-210ENST00000531842 NTM-AS1Q6ZSK4 140 aa5.64□□□□□ -1.51
USF1-210ENST00000531842 CLRN3Q8NCR9 226 aa5.64□□□□□ -1.51
USF1-210ENST00000531842 OR2D3Q8NGH3 330 aa5.64□□□□□ -1.51
USF1-210ENST00000531842 SMIM12Q96EX1 92 aa5.64□□□□□ -1.51
USF1-210ENST00000531842 RNASE7Q9H1E1 156 aaKnown RBP5.64□□□□□ -1.51
USF1-210ENST00000531842 DPH3P1Q9H4G8 78 aa5.64□□□□□ -1.51
USF1-210ENST00000531842 hDV102S1A0JD36 115 aa5.63□□□□□ -1.51
USF1-210ENST00000531842 C9JQL5 133 aa5.63□□□□□ -1.51
USF1-210ENST00000531842 H7C1H1 209 aa5.63□□□□□ -1.51
USF1-210ENST00000531842 KRTAP10-8P60410 259 aa5.63□□□□□ -1.51
USF1-210ENST00000531842 BLOC1S1P78537 153 aa5.63□□□□□ -1.51
USF1-210ENST00000531842 REG3AQ06141 175 aa5.63□□□□□ -1.51
USF1-210ENST00000531842 LYZL1Q6UWQ5 148 aa5.63□□□□□ -1.51
USF1-210ENST00000531842 GTSF1Q8WW33 167 aa5.63□□□□□ -1.51
USF1-210ENST00000531842 AP5S1Q9NUS5 200 aa5.63□□□□□ -1.51
USF1-210ENST00000531842 PRR34Q9NV39 138 aa5.63□□□□□ -1.51
USF1-210ENST00000531842 TMEM250H0YL14 139 aa5.62□□□□□ -1.51
USF1-210ENST00000531842 TEX46H3BTG2 121 aa5.62□□□□□ -1.51
USF1-210ENST00000531842 IFNA1P01562 189 aa5.62□□□□□ -1.51
USF1-210ENST00000531842 FOXA3P55318 350 aaPredicted RBP5.62□□□□□ -1.51
USF1-210ENST00000531842 RPS20P60866 119 aaKnown RBP5.62□□□□□ -1.51
USF1-210ENST00000531842 SRSF3P84103 164 aaKnown RBP5.62□□□□□ -1.51
USF1-210ENST00000531842 IQCJQ1A5X6 159 aa5.62□□□□□ -1.51
USF1-210ENST00000531842 FER1L6-AS1Q8NA97 138 aa5.62□□□□□ -1.51
USF1-210ENST00000531842 SPACA4Q8TDM5 124 aa5.62□□□□□ -1.51
USF1-210ENST00000531842 FAM210AQ96ND0 272 aa5.62□□□□□ -1.51
USF1-210ENST00000531842 IGHV3-64A0A075B6Q5 118 aa5.61□□□□□ -1.51
USF1-210ENST00000531842 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.61□□□□□ -1.51
USF1-210ENST00000531842 TRAV8-4A0A0B4J246 113 aa5.61□□□□□ -1.51
USF1-210ENST00000531842 A0A0J9YXV3 536 aa5.61□□□□□ -1.51
USF1-210ENST00000531842 M0QY20 66 aa5.61□□□□□ -1.51
USF1-210ENST00000531842 UBE2L6O14933 153 aa5.61□□□□□ -1.51
USF1-210ENST00000531842 P01737 135 aa5.61□□□□□ -1.51
USF1-210ENST00000531842 SRP19P09132 144 aaKnown RBP5.61□□□□□ -1.51
USF1-210ENST00000531842 CTRLP40313 264 aa5.61□□□□□ -1.51
USF1-210ENST00000531842 CACNG7P62955 275 aa5.61□□□□□ -1.51
USF1-210ENST00000531842 PRR3P79522 188 aaKnown RBP5.61□□□□□ -1.51
USF1-210ENST00000531842 SUMO4Q6EEV6 95 aa5.61□□□□□ -1.51
USF1-210ENST00000531842 TMEM243Q9BU79 118 aa5.61□□□□□ -1.51
USF1-210ENST00000531842 CNFNQ9BYD5 112 aa5.61□□□□□ -1.51
USF1-210ENST00000531842 GFRA4Q9GZZ7 299 aa5.61□□□□□ -1.51
USF1-210ENST00000531842 IGKV2-24A0A0C4DH68 120 aa5.6□□□□□ -1.51
USF1-210ENST00000531842 XKRY2A2RUG3 117 aa5.6□□□□□ -1.51
USF1-210ENST00000531842 NTF3P20783 257 aa5.6□□□□□ -1.51
USF1-210ENST00000531842 TAGLN2P37802 199 aaKnown RBP5.6□□□□□ -1.51
USF1-210ENST00000531842 WDR73Q6P4I2 378 aa5.6□□□□□ -1.51
USF1-210ENST00000531842 C20orf203Q8NBC4 194 aa5.6□□□□□ -1.51
USF1-210ENST00000531842 RPP21Q9H633 154 aaKnown RBP5.6□□□□□ -1.51
USF1-210ENST00000531842 IGLV4-60A0A075B6I1 120 aa5.59□□□□□ -1.51
USF1-210ENST00000531842 IGKV3OR2-268A0A0C4DH90 116 aa5.59□□□□□ -1.51
USF1-210ENST00000531842 F2Z2F3 143 aa5.59□□□□□ -1.51
USF1-210ENST00000531842 TRGC1P0CF51 173 aa5.59□□□□□ -1.51
USF1-210ENST00000531842 AMTP48728 403 aa5.59□□□□□ -1.51
USF1-210ENST00000531842 CNBPP62633 177 aaKnown RBP5.59□□□□□ -1.51
USF1-210ENST00000531842 COX6A2Q02221 97 aa5.59□□□□□ -1.51
USF1-210ENST00000531842 COTL1Q14019 142 aa5.59□□□□□ -1.51
USF1-210ENST00000531842 CFAP161Q6P656 301 aa5.59□□□□□ -1.51
USF1-210ENST00000531842 RASL11AQ6T310 242 aa5.59□□□□□ -1.51
USF1-210ENST00000531842 TEX261Q6UWH6 196 aa5.59□□□□□ -1.51
USF1-210ENST00000531842 FAM231DQ6ZW35 169 aa5.59□□□□□ -1.51
USF1-210ENST00000531842 LINC01551Q86U37 167 aa5.59□□□□□ -1.51
USF1-210ENST00000531842 PRSS3P2Q8NHM4 247 aa5.59□□□□□ -1.51
USF1-210ENST00000531842 PLAC8Q9NZF1 115 aa5.59□□□□□ -1.51
USF1-210ENST00000531842 A0A1B0GUV1 79 aa5.58□□□□□ -1.52
USF1-210ENST00000531842 GAGE12HA6NDE8 117 aa5.58□□□□□ -1.52
USF1-210ENST00000531842 NDUFS6O75380 124 aaKnown RBP5.58□□□□□ -1.52
USF1-210ENST00000531842 MAJINQ3KP22 176 aa5.58□□□□□ -1.52
USF1-210ENST00000531842 NIT2Q9NQR4 276 aa5.58□□□□□ -1.52
USF1-210ENST00000531842 TRAV26-2A0A0B4J265 109 aa5.57□□□□□ -1.52
USF1-210ENST00000531842 CEBPGP53567 150 aa5.57□□□□□ -1.52
USF1-210ENST00000531842 TWIST1Q15672 202 aa5.57□□□□□ -1.52
USF1-210ENST00000531842 HIGD2BQ4VC39 106 aa5.57□□□□□ -1.52
USF1-210ENST00000531842 AMMECR1LQ6DCA0 310 aa5.57□□□□□ -1.52
USF1-210ENST00000531842 GATD1Q8NB37 220 aa5.57□□□□□ -1.52
USF1-210ENST00000531842 C7orf33Q8WU49 177 aa5.57□□□□□ -1.52
USF1-210ENST00000531842 RNF185Q96GF1 192 aa5.57□□□□□ -1.52
USF1-210ENST00000531842 EIF5A2Q9GZV4 153 aaKnown RBP5.57□□□□□ -1.52
USF1-210ENST00000531842 BIN3Q9NQY0 253 aa5.57□□□□□ -1.52
USF1-210ENST00000531842 FAT4Q6V0I7 4981 aa5.57□□□□□ -1.52
USF1-210ENST00000531842 KRTAP9-6A0A140TA67 174 aa5.56□□□□□ -1.52
USF1-210ENST00000531842 GATCO43716 136 aaKnown RBP5.56□□□□□ -1.52
USF1-210ENST00000531842 RNASEKQ6P5S7 137 aaKnown RBP5.56□□□□□ -1.52
USF1-210ENST00000531842 STPG4Q8N801 248 aa5.56□□□□□ -1.52
USF1-210ENST00000531842 C15orf56Q8N910 161 aa5.56□□□□□ -1.52
USF1-210ENST00000531842 RPL39LQ96EH5 51 aaKnown RBP5.56□□□□□ -1.52
USF1-210ENST00000531842 PGLYRP4Q96LB8 373 aa5.56□□□□□ -1.52
USF1-210ENST00000531842 SMIM7Q9BQ49 75 aa5.56□□□□□ -1.52
USF1-210ENST00000531842 V9GYV3 84 aa5.56□□□□□ -1.52
USF1-210ENST00000531842 A0A096LNI7 61 aa5.55□□□□□ -1.52
USF1-210ENST00000531842 RPS10P46783 165 aaKnown RBP5.55□□□□□ -1.52
USF1-210ENST00000531842 RPL23P62829 140 aaKnown RBP5.55□□□□□ -1.52
USF1-210ENST00000531842 CT83Q5H943 113 aa5.55□□□□□ -1.52
USF1-210ENST00000531842 SMIM15Q7Z3B0 74 aa5.55□□□□□ -1.52
USF1-210ENST00000531842 ISOC2Q96AB3 205 aa5.55□□□□□ -1.52
USF1-210ENST00000531842 ZNF727A8MUV8 499 aa5.54□□□□□ -1.52
USF1-210ENST00000531842 HIGD1CA8MV81 97 aa5.54□□□□□ -1.52
USF1-210ENST00000531842 SRSF9Q13242 221 aaKnown RBP eCLIP5.54□□□□□ -1.52
USF1-210ENST00000531842 TSKUQ8WUA8 353 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms