RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 SMKR1H3BMG3 65 aa12.02□□□□□ -0.49
PTPN11-204ENST00000531326 NCR2O95944 276 aa12.02□□□□□ -0.49
PTPN11-204ENST00000531326 OR10J3Q5JRS4 329 aa12.02□□□□□ -0.49
PTPN11-204ENST00000531326 ATRAIDQ6UW56 229 aa12.02□□□□□ -0.49
PTPN11-204ENST00000531326 URGCP-MRPS24S4R325 110 aa12.02□□□□□ -0.49
PTPN11-204ENST00000531326 VPS13BQ7Z7G8 4022 aa12.01□□□□□ -0.49
PTPN11-204ENST00000531326 TRAV8-6A0A0B4J262 113 aa12.01□□□□□ -0.49
PTPN11-204ENST00000531326 TRBV6-5A0A0K0K1A5 114 aa12.01□□□□□ -0.49
PTPN11-204ENST00000531326 INAFM2P0DMQ5 153 aa12.01□□□□□ -0.49
PTPN11-204ENST00000531326 S100PP25815 95 aa12.01□□□□□ -0.49
PTPN11-204ENST00000531326 NTM-AS1Q6ZSK4 140 aa12.01□□□□□ -0.49
PTPN11-204ENST00000531326 TRBV6-8A0A0A6YYG3 113 aa12□□□□□ -0.49
PTPN11-204ENST00000531326 Q5VSD8 79 aa12□□□□□ -0.49
PTPN11-204ENST00000531326 NRACQ8N912 160 aa12□□□□□ -0.49
PTPN11-204ENST00000531326 TRAV9-2A0A087WT02 112 aa11.99□□□□□ -0.49
PTPN11-204ENST00000531326 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.99□□□□□ -0.49
PTPN11-204ENST00000531326 DMBT1Q9UGM3 2413 aaPredicted RBP11.99□□□□□ -0.49
PTPN11-204ENST00000531326 MYCBP2O75592 4640 aa11.99□□□□□ -0.49
PTPN11-204ENST00000531326 SDHAF1A6NFY7 115 aa11.98□□□□□ -0.49
PTPN11-204ENST00000531326 TMEM97Q5BJF2 176 aa11.98□□□□□ -0.49
PTPN11-204ENST00000531326 TMEM136Q6ZRR5 245 aa11.98□□□□□ -0.49
PTPN11-204ENST00000531326 D6R8Y8 96 aa11.97□□□□□ -0.49
PTPN11-204ENST00000531326 CKS2P33552 79 aa11.97□□□□□ -0.49
PTPN11-204ENST00000531326 LINC01556Q5JQF7 62 aa11.97□□□□□ -0.49
PTPN11-204ENST00000531326 Q8N3U1 123 aa11.97□□□□□ -0.49
PTPN11-204ENST00000531326 DEFB104AQ8WTQ1 72 aa11.97□□□□□ -0.49
PTPN11-204ENST00000531326 TMEM70Q9BUB7 260 aa11.97□□□□□ -0.49
PTPN11-204ENST00000531326 ST20Q9HBF5 79 aa11.97□□□□□ -0.49
PTPN11-204ENST00000531326 K7EP13 123 aa11.96□□□□□ -0.49
PTPN11-204ENST00000531326 POLR2KP53803 58 aaKnown RBP11.96□□□□□ -0.49
PTPN11-204ENST00000531326 IQCJQ1A5X6 159 aa11.96□□□□□ -0.49
PTPN11-204ENST00000531326 TRBV24-1A0A075B6N3 115 aa11.95□□□□□ -0.5
PTPN11-204ENST00000531326 PPP1R17O96001 155 aa11.95□□□□□ -0.5
PTPN11-204ENST00000531326 SMR3BP02814 79 aaPredicted RBP11.95□□□□□ -0.5
PTPN11-204ENST00000531326 ELOBQ15370 118 aa11.95□□□□□ -0.5
PTPN11-204ENST00000531326 NIT1Q86X76 327 aa11.95□□□□□ -0.5
PTPN11-204ENST00000531326 SRRM2Q9UQ35 2752 aaKnown RBP11.94□□□□□ -0.5
PTPN11-204ENST00000531326 IGHV1-24A0A0C4DH33 117 aa11.94□□□□□ -0.5
PTPN11-204ENST00000531326 TNFRSF6BO95407 300 aa11.94□□□□□ -0.5
PTPN11-204ENST00000531326 NPYP01303 97 aa11.94□□□□□ -0.5
PTPN11-204ENST00000531326 PPBPP02775 128 aa11.94□□□□□ -0.5
PTPN11-204ENST00000531326 GCSHP23434 173 aa11.94□□□□□ -0.5
PTPN11-204ENST00000531326 COTL1Q14019 142 aa11.94□□□□□ -0.5
PTPN11-204ENST00000531326 YPEL4Q96NS1 127 aa11.94□□□□□ -0.5
PTPN11-204ENST00000531326 TRBV25-1A0A075B6N4 114 aa11.93□□□□□ -0.5
PTPN11-204ENST00000531326 TGIF2-C20orf24A0A0A6YYL0 155 aa11.93□□□□□ -0.5
PTPN11-204ENST00000531326 TRBV27A0A0K0K1C4 114 aa11.93□□□□□ -0.5
PTPN11-204ENST00000531326 I3L3M4 83 aa11.93□□□□□ -0.5
PTPN11-204ENST00000531326 IGHV3-30P01768 117 aa11.93□□□□□ -0.5
PTPN11-204ENST00000531326 IGHV3-33P01772 117 aa11.93□□□□□ -0.5
PTPN11-204ENST00000531326 IGHV3-30-3P0DP02 117 aa11.93□□□□□ -0.5
PTPN11-204ENST00000531326 IGHV3-30-5P0DP03 117 aa11.93□□□□□ -0.5
PTPN11-204ENST00000531326 SUMO2P61956 95 aaKnown RBP11.93□□□□□ -0.5
PTPN11-204ENST00000531326 HAMPP81172 84 aa11.93□□□□□ -0.5
PTPN11-204ENST00000531326 ORMDL3Q8N138 153 aa11.93□□□□□ -0.5
PTPN11-204ENST00000531326 C20orf78Q9BR46 151 aa11.93□□□□□ -0.5
PTPN11-204ENST00000531326 GNB1LQ9BYB4 327 aa11.93□□□□□ -0.5
PTPN11-204ENST00000531326 FLG2Q5D862 2391 aaPredicted RBP11.93□□□□□ -0.5
PTPN11-204ENST00000531326 LRCOL1A6NCL2 159 aa11.92□□□□□ -0.5
PTPN11-204ENST00000531326 TSHBP01222 138 aa11.92□□□□□ -0.5
PTPN11-204ENST00000531326 PMCHP20382 165 aa11.92□□□□□ -0.5
PTPN11-204ENST00000531326 PRELID3AQ96N28 172 aa11.92□□□□□ -0.5
PTPN11-204ENST00000531326 CHCHD5Q9BSY4 110 aa11.92□□□□□ -0.5
PTPN11-204ENST00000531326 PHOX2AO14813 284 aa11.91□□□□□ -0.5
PTPN11-204ENST00000531326 HLA-DQA1P01909 254 aa11.91□□□□□ -0.5
PTPN11-204ENST00000531326 RPL32P62910 135 aaKnown RBP11.91□□□□□ -0.5
PTPN11-204ENST00000531326 COX19Q49B96 90 aa11.91□□□□□ -0.5
PTPN11-204ENST00000531326 CBLN2Q8IUK8 224 aa11.91□□□□□ -0.5
PTPN11-204ENST00000531326 C10orf126Q8N4M7 172 aa11.91□□□□□ -0.5
PTPN11-204ENST00000531326 TMEM243Q9BU79 118 aa11.91□□□□□ -0.5
PTPN11-204ENST00000531326 VCYO14598 125 aa11.9□□□□□ -0.5
PTPN11-204ENST00000531326 APCSP02743 223 aa11.9□□□□□ -0.5
PTPN11-204ENST00000531326 AMTP48728 403 aa11.9□□□□□ -0.5
PTPN11-204ENST00000531326 CHCHD7Q9BUK0 85 aa11.9□□□□□ -0.5
PTPN11-204ENST00000531326 TMEM262E9PQX1 116 aa11.89□□□□□ -0.51
PTPN11-204ENST00000531326 GAGE6Q13070 117 aa11.89□□□□□ -0.51
PTPN11-204ENST00000531326 KIAA1644Q3SXP7 199 aa11.89□□□□□ -0.51
PTPN11-204ENST00000531326 MPV17L2Q567V2 206 aa11.89□□□□□ -0.51
PTPN11-204ENST00000531326 SMCO4Q9NRQ5 59 aa11.89□□□□□ -0.51
PTPN11-204ENST00000531326 LAMTOR2Q9Y2Q5 125 aa11.89□□□□□ -0.51
PTPN11-204ENST00000531326 A0A087WX48 190 aa11.88□□□□□ -0.51
PTPN11-204ENST00000531326 IBA57-AS1B1ANH7 110 aa11.88□□□□□ -0.51
PTPN11-204ENST00000531326 MT-ND6P03923 174 aa11.88□□□□□ -0.51
PTPN11-204ENST00000531326 PKIAP61925 76 aa11.88□□□□□ -0.51
PTPN11-204ENST00000531326 SMIM2Q9BVW6 85 aa11.88□□□□□ -0.51
PTPN11-204ENST00000531326 DNAH8Q96JB1 4490 aa11.88□□□□□ -0.51
PTPN11-204ENST00000531326 IGLV5-52A0A0A0MRZ9 124 aa11.87□□□□□ -0.51
PTPN11-204ENST00000531326 PRSS47A8MTI9 375 aa11.87□□□□□ -0.51
PTPN11-204ENST00000531326 ESDP10768 282 aa11.87□□□□□ -0.51
PTPN11-204ENST00000531326 MRPL18Q9H0U6 180 aaKnown RBP11.87□□□□□ -0.51
PTPN11-204ENST00000531326 PSCAO43653 123 aa11.86□□□□□ -0.51
PTPN11-204ENST00000531326 RBX1P62877 108 aa11.86□□□□□ -0.51
PTPN11-204ENST00000531326 Q8N976 141 aa11.86□□□□□ -0.51
PTPN11-204ENST00000531326 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.85□□□□□ -0.51
PTPN11-204ENST00000531326 IGKV2-29A2NJV5 120 aaPredicted RBP11.85□□□□□ -0.51
PTPN11-204ENST00000531326 FAM229AH3BQW9 127 aa11.85□□□□□ -0.51
PTPN11-204ENST00000531326 LAGE3Q14657 143 aa11.85□□□□□ -0.51
PTPN11-204ENST00000531326 NTN5Q8WTR8 489 aaPredicted RBP11.85□□□□□ -0.51
PTPN11-204ENST00000531326 KIR2DL4Q99706 377 aa11.85□□□□□ -0.51
PTPN11-204ENST00000531326 FAM30AQ9NZY2 134 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms