RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 TSPAN13O95857 204 aa9.26□□□□□ -0.93
SCN3B-206ENST00000530277 A0A0J9YY99 117 aa9.26□□□□□ -0.93
SCN3B-206ENST00000530277 DEFB113Q30KQ7 82 aa9.26□□□□□ -0.93
SCN3B-206ENST00000530277 RNASE3P12724 160 aaKnown RBP9.26□□□□□ -0.93
SCN3B-206ENST00000530277 SIVA1O15304 175 aa9.25□□□□□ -0.93
SCN3B-206ENST00000530277 C6orf226Q5I0X4 101 aa9.25□□□□□ -0.93
SCN3B-206ENST00000530277 MUSTN1Q8IVN3 82 aa9.25□□□□□ -0.93
SCN3B-206ENST00000530277 SPAG8Q99932 426 aaPredicted RBP9.25□□□□□ -0.93
SCN3B-206ENST00000530277 GAGE2BQ13066 116 aa9.25□□□□□ -0.93
SCN3B-206ENST00000530277 GAGE2EQ4V326 116 aa9.25□□□□□ -0.93
SCN3B-206ENST00000530277 NRACQ8N912 160 aa9.25□□□□□ -0.93
SCN3B-206ENST00000530277 TOMM6Q96B49 74 aa9.25□□□□□ -0.93
SCN3B-206ENST00000530277 PRORYQ9H606 182 aa9.25□□□□□ -0.93
SCN3B-206ENST00000530277 GAGE2DQ9UEU5 116 aa9.25□□□□□ -0.93
SCN3B-206ENST00000530277 ZANQ9Y493 2812 aa9.25□□□□□ -0.93
SCN3B-206ENST00000530277 H3BUA1 57 aa9.25□□□□□ -0.93
SCN3B-206ENST00000530277 ZFAND6Q6FIF0 208 aa9.25□□□□□ -0.93
SCN3B-206ENST00000530277 C5orf38Q86SI9 138 aa9.25□□□□□ -0.93
SCN3B-206ENST00000530277 GPHB5Q86YW7 130 aa9.25□□□□□ -0.93
SCN3B-206ENST00000530277 CITED2Q99967 270 aaPredicted RBP9.25□□□□□ -0.93
SCN3B-206ENST00000530277 F8P00451 2351 aa9.25□□□□□ -0.93
SCN3B-206ENST00000530277 WFDC10AQ9H1F0 79 aa9.24□□□□□ -0.93
SCN3B-206ENST00000530277 MALP21145 153 aa9.24□□□□□ -0.93
SCN3B-206ENST00000530277 Q9H8V8 135 aa9.24□□□□□ -0.93
SCN3B-206ENST00000530277 NTN5Q8WTR8 489 aaPredicted RBP9.23□□□□□ -0.93
SCN3B-206ENST00000530277 CRYBG3Q68DQ2 2970 aa9.23□□□□□ -0.93
SCN3B-206ENST00000530277 IGSF10Q6WRI0 2623 aa9.23□□□□□ -0.93
SCN3B-206ENST00000530277 NBEAL2Q6ZNJ1 2754 aa9.23□□□□□ -0.93
SCN3B-206ENST00000530277 IGLV10-54A0A075B6I4 117 aa9.22□□□□□ -0.93
SCN3B-206ENST00000530277 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.22□□□□□ -0.93
SCN3B-206ENST00000530277 PIFOQ8TCI5 191 aa9.22□□□□□ -0.93
SCN3B-206ENST00000530277 RNF183Q96D59 192 aa9.22□□□□□ -0.93
SCN3B-206ENST00000530277 MT-ATP8P03928 68 aa9.22□□□□□ -0.93
SCN3B-206ENST00000530277 MORN3Q6PF18 240 aaPredicted RBP9.22□□□□□ -0.93
SCN3B-206ENST00000530277 E9PLD3 99 aa9.21□□□□□ -0.93
SCN3B-206ENST00000530277 RHODO00212 210 aa9.21□□□□□ -0.93
SCN3B-206ENST00000530277 XCL1P47992 114 aa9.21□□□□□ -0.93
SCN3B-206ENST00000530277 U3KQK5 164 aa9.21□□□□□ -0.93
SCN3B-206ENST00000530277 TEX15Q9BXT5 2789 aa9.21□□□□□ -0.94
SCN3B-206ENST00000530277 K7EQG2 157 aa9.21□□□□□ -0.94
SCN3B-206ENST00000530277 SLC25A20O43772 301 aa9.21□□□□□ -0.94
SCN3B-206ENST00000530277 J3QLI3 93 aa9.21□□□□□ -0.94
SCN3B-206ENST00000530277 Q6ZTI0 123 aa9.21□□□□□ -0.94
SCN3B-206ENST00000530277 TRAV8-4A0A0B4J246 113 aa9.2□□□□□ -0.94
SCN3B-206ENST00000530277 F8W1H4 67 aa9.2□□□□□ -0.94
SCN3B-206ENST00000530277 Q6ZUT4 128 aa9.2□□□□□ -0.94
SCN3B-206ENST00000530277 CFAP161Q6P656 301 aa9.2□□□□□ -0.94
SCN3B-206ENST00000530277 C20orf203Q8NBC4 194 aa9.2□□□□□ -0.94
SCN3B-206ENST00000530277 K7EMT4 169 aa9.2□□□□□ -0.94
SCN3B-206ENST00000530277 CFC1BP0CG36 223 aa9.2□□□□□ -0.94
SCN3B-206ENST00000530277 CFC1P0CG37 223 aa9.2□□□□□ -0.94
SCN3B-206ENST00000530277 CITED1Q99966 193 aa9.2□□□□□ -0.94
SCN3B-206ENST00000530277 HHLA3Q9XRX5 114 aa9.2□□□□□ -0.94
SCN3B-206ENST00000530277 F5H768 121 aa9.19□□□□□ -0.94
SCN3B-206ENST00000530277 ATXN8Q156A1 80 aa9.19□□□□□ -0.94
SCN3B-206ENST00000530277 NEXN-AS1Q8NBZ9 246 aa9.19□□□□□ -0.94
SCN3B-206ENST00000530277 SCGB1A1P11684 91 aa9.19□□□□□ -0.94
SCN3B-206ENST00000530277 ZNF580Q9UK33 172 aa9.19□□□□□ -0.94
SCN3B-206ENST00000530277 GCN1Q92616 2671 aaKnown RBP9.18□□□□□ -0.94
SCN3B-206ENST00000530277 CRPP02741 224 aa9.18□□□□□ -0.94
SCN3B-206ENST00000530277 TMEM243Q9BU79 118 aa9.18□□□□□ -0.94
SCN3B-206ENST00000530277 MAP6D1Q9H9H5 199 aa9.18□□□□□ -0.94
SCN3B-206ENST00000530277 IGHV3-30-3P0DP02 117 aa9.18□□□□□ -0.94
SCN3B-206ENST00000530277 IGHV4-31P0DP07 118 aa9.18□□□□□ -0.94
SCN3B-206ENST00000530277 PSMB8P28062 276 aa9.18□□□□□ -0.94
SCN3B-206ENST00000530277 CLEC2BQ92478 149 aa9.18□□□□□ -0.94
SCN3B-206ENST00000530277 H3BMM0 161 aa9.17□□□□□ -0.94
SCN3B-206ENST00000530277 C10orf126Q8N4M7 172 aa9.17□□□□□ -0.94
SCN3B-206ENST00000530277 DCANP1Q8TF63 244 aa9.17□□□□□ -0.94
SCN3B-206ENST00000530277 SMG1Q96Q15 3661 aaKnown RBP9.17□□□□□ -0.94
SCN3B-206ENST00000530277 TAL2Q16559 108 aa9.17□□□□□ -0.94
SCN3B-206ENST00000530277 HIGD1BQ9P298 99 aa9.17□□□□□ -0.94
SCN3B-206ENST00000530277 TRAV12-1A0A0B4J245 112 aa9.16□□□□□ -0.94
SCN3B-206ENST00000530277 RHOHQ15669 191 aa9.16□□□□□ -0.94
SCN3B-206ENST00000530277 DNAJC9-AS1A6NH13 148 aa9.16□□□□□ -0.94
SCN3B-206ENST00000530277 M0QY20 66 aa9.16□□□□□ -0.94
SCN3B-206ENST00000530277 LINC00467Q9BRT7 94 aa9.16□□□□□ -0.94
SCN3B-206ENST00000530277 CDKN2A-AS1Q9UH64 79 aa9.16□□□□□ -0.94
SCN3B-206ENST00000530277 CRLF1O75462 422 aa9.15□□□□□ -0.94
SCN3B-206ENST00000530277 NDUFA7O95182 113 aa9.15□□□□□ -0.94
SCN3B-206ENST00000530277 CARD19Q96LW7 228 aa9.15□□□□□ -0.94
SCN3B-206ENST00000530277 UTP20O75691 2785 aaKnown RBP9.15□□□□□ -0.94
SCN3B-206ENST00000530277 UBR5O95071 2799 aaPredicted RBP9.15□□□□□ -0.94
SCN3B-206ENST00000530277 HERV-K104P63124 156 aa9.15□□□□□ -0.94
SCN3B-206ENST00000530277 GAGE2AQ6NT46 116 aa9.15□□□□□ -0.95
SCN3B-206ENST00000530277 PPDPFLQ8WWR9 84 aa9.15□□□□□ -0.95
SCN3B-206ENST00000530277 C1QTNF4Q9BXJ3 329 aa9.15□□□□□ -0.95
SCN3B-206ENST00000530277 LEPROTO15243 131 aa9.14□□□□□ -0.95
SCN3B-206ENST00000530277 ANGP03950 147 aaKnown RBP9.14□□□□□ -0.95
SCN3B-206ENST00000530277 SMR3AQ99954 134 aa9.14□□□□□ -0.95
SCN3B-206ENST00000530277 TIMM17AQ99595 171 aa9.14□□□□□ -0.95
SCN3B-206ENST00000530277 SPANXB1Q9NS25 103 aaPredicted RBP9.14□□□□□ -0.95
SCN3B-206ENST00000530277 COL27A1Q8IZC6 1860 aaPredicted RBP9.14□□□□□ -0.95
SCN3B-206ENST00000530277 TCL1BO95988 128 aa9.14□□□□□ -0.95
SCN3B-206ENST00000530277 CRYGDP07320 174 aa9.14□□□□□ -0.95
SCN3B-206ENST00000530277 MRPL23Q16540 153 aaKnown RBP9.14□□□□□ -0.95
SCN3B-206ENST00000530277 DCHS2Q6V1P9 2916 aa9.13□□□□□ -0.95
SCN3B-206ENST00000530277 Q6ZSV7 163 aa9.13□□□□□ -0.95
SCN3B-206ENST00000530277 NDUFA11Q86Y39 141 aa9.13□□□□□ -0.95
SCN3B-206ENST00000530277 COPS9Q8WXC6 57 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms