RNA–Protein interactions for RNA: ENST00000529469.1

SOX6-212, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-212ENST00000529469 TXNDC17Q9BRA2 123 aa2.26□□□□□ -2.05
SOX6-212ENST00000529469 TTTY13Q9BZ97 58 aa2.26□□□□□ -2.05
SOX6-212ENST00000529469 BPESC1Q9GZL8 116 aa2.26□□□□□ -2.05
SOX6-212ENST00000529469 TAC3Q9UHF0 121 aa2.26□□□□□ -2.05
SOX6-212ENST00000529469 NDUFA12Q9UI09 145 aa2.26□□□□□ -2.05
SOX6-212ENST00000529469 SLIT1O75093 1534 aa2.26□□□□□ -2.05
SOX6-212ENST00000529469 PAPPA2Q9BXP8 1791 aa2.26□□□□□ -2.05
SOX6-212ENST00000529469 SHROOM3Q8TF72 1996 aa2.25□□□□□ -2.05
SOX6-212ENST00000529469 GREB1Q4ZG55 1949 aa2.25□□□□□ -2.05
SOX6-212ENST00000529469 MGAMO43451 1857 aa2.25□□□□□ -2.05
SOX6-212ENST00000529469 UBR3Q6ZT12 1888 aa2.25□□□□□ -2.05
SOX6-212ENST00000529469 TRAV7A0A075B6U4 112 aa2.25□□□□□ -2.05
SOX6-212ENST00000529469 CTXND1A0A1B0GTU2 59 aa2.25□□□□□ -2.05
SOX6-212ENST00000529469 SMIM27A0A1W2PRY6 76 aa2.25□□□□□ -2.05
SOX6-212ENST00000529469 C5orf67F2Z3F1 127 aa2.25□□□□□ -2.05
SOX6-212ENST00000529469 IGKV1-39P01597 117 aa2.25□□□□□ -2.05
SOX6-212ENST00000529469 IGKV1D-39P04432 117 aa2.25□□□□□ -2.05
SOX6-212ENST00000529469 UBE2D1P51668 147 aa2.25□□□□□ -2.05
SOX6-212ENST00000529469 CMC4P56277 68 aaPredicted RBP2.25□□□□□ -2.05
SOX6-212ENST00000529469 KLKP1Q107X0 134 aa2.25□□□□□ -2.05
SOX6-212ENST00000529469 SPANXN1Q5VSR9 72 aa2.25□□□□□ -2.05
SOX6-212ENST00000529469 RPS27LQ71UM5 84 aaKnown RBP2.25□□□□□ -2.05
SOX6-212ENST00000529469 PFN4Q8NHR9 129 aa2.25□□□□□ -2.05
SOX6-212ENST00000529469 SMCR5Q8TEV8 140 aa2.25□□□□□ -2.05
SOX6-212ENST00000529469 TMEM141Q96I45 108 aa2.25□□□□□ -2.05
SOX6-212ENST00000529469 TIMM21Q9BVV7 248 aa2.25□□□□□ -2.05
SOX6-212ENST00000529469 PHLDA3Q9Y5J5 127 aa2.25□□□□□ -2.05
SOX6-212ENST00000529469 V9GYV3 84 aa2.25□□□□□ -2.05
SOX6-212ENST00000529469 SVILO95425 2214 aa2.25□□□□□ -2.05
SOX6-212ENST00000529469 PTPRSQ13332 1948 aa2.25□□□□□ -2.05
SOX6-212ENST00000529469 SIP14410 1827 aa2.24□□□□□ -2.05
SOX6-212ENST00000529469 NUP98P52948 1817 aa2.24□□□□□ -2.05
SOX6-212ENST00000529469 KIAA1549LQ6ZVL6 1849 aa2.24□□□□□ -2.05
SOX6-212ENST00000529469 IGHV3-49A0A0A0MS15 119 aa2.24□□□□□ -2.05
SOX6-212ENST00000529469 IGKV1-6A0A0C4DH72 117 aa2.24□□□□□ -2.05
SOX6-212ENST00000529469 C17orf51A8MQB3 221 aa2.24□□□□□ -2.05
SOX6-212ENST00000529469 E7EUB6 86 aa2.24□□□□□ -2.05
SOX6-212ENST00000529469 J3QRE1 110 aa2.24□□□□□ -2.05
SOX6-212ENST00000529469 SUPT4H1P63272 117 aaKnown RBP2.24□□□□□ -2.05
SOX6-212ENST00000529469 LUZP6Q538Z0 58 aa2.24□□□□□ -2.05
SOX6-212ENST00000529469 KPRPQ5T749 579 aaPredicted RBP2.24□□□□□ -2.05
SOX6-212ENST00000529469 VMO1Q7Z5L0 202 aa2.24□□□□□ -2.05
SOX6-212ENST00000529469 DYNAPQ8N1N2 210 aa2.24□□□□□ -2.05
SOX6-212ENST00000529469 SCGB3A1Q96QR1 104 aa2.24□□□□□ -2.05
SOX6-212ENST00000529469 RNF5Q99942 180 aa2.24□□□□□ -2.05
SOX6-212ENST00000529469 RETNLBQ9BQ08 111 aa2.24□□□□□ -2.05
SOX6-212ENST00000529469 CHCHD7Q9BUK0 85 aa2.24□□□□□ -2.05
SOX6-212ENST00000529469 PLA2G12AQ9BZM1 189 aa2.24□□□□□ -2.05
SOX6-212ENST00000529469 PSENENQ9NZ42 101 aa2.24□□□□□ -2.05
SOX6-212ENST00000529469 PRO1854Q9UHT4 67 aa2.24□□□□□ -2.05
SOX6-212ENST00000529469 TIMM9Q9Y5J7 89 aa2.24□□□□□ -2.05
SOX6-212ENST00000529469 NRXN3Q9Y4C0 1643 aa2.24□□□□□ -2.05
SOX6-212ENST00000529469 PCDH15Q96QU1 1955 aa2.23□□□□□ -2.05
SOX6-212ENST00000529469 BAZ2BQ9UIF8 2168 aaKnown RBP2.23□□□□□ -2.05
SOX6-212ENST00000529469 DOCK11Q5JSL3 2073 aa2.23□□□□□ -2.05
SOX6-212ENST00000529469 IGLV3-9A0A075B6K5 115 aa2.23□□□□□ -2.05
SOX6-212ENST00000529469 ZNF815PA8K554 130 aa2.23□□□□□ -2.05
SOX6-212ENST00000529469 HCG22E2RYF7 251 aa2.23□□□□□ -2.05
SOX6-212ENST00000529469 C3orf84H3BNL1 204 aa2.23□□□□□ -2.05
SOX6-212ENST00000529469 TFF1P04155 84 aa2.23□□□□□ -2.05
SOX6-212ENST00000529469 NPPCP23582 126 aa2.23□□□□□ -2.05
SOX6-212ENST00000529469 LYPD6Q86Y78 171 aa2.23□□□□□ -2.05
SOX6-212ENST00000529469 CLECL1Q8IZS7 167 aa2.23□□□□□ -2.05
SOX6-212ENST00000529469 Q8N6K4 173 aa2.23□□□□□ -2.05
SOX6-212ENST00000529469 CCL4L1Q8NHW4 92 aa2.23□□□□□ -2.05
SOX6-212ENST00000529469 Q96M85 177 aa2.23□□□□□ -2.05
SOX6-212ENST00000529469 C11orf1Q9H5F2 150 aa2.23□□□□□ -2.05
SOX6-212ENST00000529469 THADAQ6YHU6 1953 aa2.23□□□□□ -2.05
SOX6-212ENST00000529469 LCTP09848 1927 aa2.23□□□□□ -2.05
SOX6-212ENST00000529469 NRAPQ86VF7 1730 aa2.22□□□□□ -2.05
SOX6-212ENST00000529469 TNS1Q9HBL0 1735 aaKnown RBP2.22□□□□□ -2.05
SOX6-212ENST00000529469 IGLV3-12A0A075B6K2 115 aa2.22□□□□□ -2.05
SOX6-212ENST00000529469 IGKV2D-26A0A0A0MRZ7 120 aa2.22□□□□□ -2.05
SOX6-212ENST00000529469 IGLV3-32A0A0A0MS00 114 aa2.22□□□□□ -2.05
SOX6-212ENST00000529469 TRAV22A0A0B4J277 110 aa2.22□□□□□ -2.05
SOX6-212ENST00000529469 IGKV3D-7A0A0C4DH55 119 aa2.22□□□□□ -2.05
SOX6-212ENST00000529469 C16orf90A8MZG2 172 aa2.22□□□□□ -2.05
SOX6-212ENST00000529469 CHKB-CPT1BH3BT56 60 aa2.22□□□□□ -2.05
SOX6-212ENST00000529469 PIN1P1O15428 100 aa2.22□□□□□ -2.05
SOX6-212ENST00000529469 GNRH2O43555 120 aa2.22□□□□□ -2.05
SOX6-212ENST00000529469 IFI6P09912 130 aa2.22□□□□□ -2.05
SOX6-212ENST00000529469 MIFP14174 115 aa2.22□□□□□ -2.05
SOX6-212ENST00000529469 RPL27AP46776 148 aaKnown RBP2.22□□□□□ -2.05
SOX6-212ENST00000529469 EDDM3BP56851 147 aa2.22□□□□□ -2.05
SOX6-212ENST00000529469 RPL38P63173 70 aaKnown RBP2.22□□□□□ -2.05
SOX6-212ENST00000529469 COL18A1P39060 1754 aa2.22□□□□□ -2.05
SOX6-212ENST00000529469 DUOX1Q9NRD9 1551 aa2.22□□□□□ -2.05
SOX6-212ENST00000529469 RICTORQ6R327 1708 aa2.22□□□□□ -2.05
SOX6-212ENST00000529469 SCN3AQ9NY46 2000 aa2.22□□□□□ -2.05
SOX6-212ENST00000529469 SHANK1Q9Y566 2161 aa2.22□□□□□ -2.05
SOX6-212ENST00000529469 NHSL1Q5SYE7 1610 aa2.21□□□□□ -2.06
SOX6-212ENST00000529469 A0A1B0GW54 56 aa2.21□□□□□ -2.06
SOX6-212ENST00000529469 A8MUU9 505 aa2.21□□□□□ -2.06
SOX6-212ENST00000529469 C19orf84I3L1E1 186 aa2.21□□□□□ -2.06
SOX6-212ENST00000529469 PLXNA2O75051 1894 aa2.21□□□□□ -2.06
SOX6-212ENST00000529469 COX6CP09669 75 aa2.21□□□□□ -2.06
SOX6-212ENST00000529469 TSPEAR-AS2P59090 65 aa2.21□□□□□ -2.06
SOX6-212ENST00000529469 FXYD3Q14802 87 aa2.21□□□□□ -2.06
SOX6-212ENST00000529469 PRR9Q5T870 116 aa2.21□□□□□ -2.06
SOX6-212ENST00000529469 ATP5EP2Q5VTU8 51 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms