RNA–Protein interactions for RNA: ENST00000529098.5

PDZD3-210, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,532 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-210ENST00000529098 CITED2Q99967 270 aaPredicted RBP13.28□□□□□ -0.28
PDZD3-210ENST00000529098 TRAV41A0A0B4J266 112 aa13.27□□□□□ -0.29
PDZD3-210ENST00000529098 DAZ2Q13117 558 aaKnown RBP13.27□□□□□ -0.29
PDZD3-210ENST00000529098 DAZ4Q86SG3 579 aaKnown RBP13.27□□□□□ -0.29
PDZD3-210ENST00000529098 DAZ1Q9NQZ3 744 aaKnown RBP13.27□□□□□ -0.29
PDZD3-210ENST00000529098 DAZ3Q9NR90 486 aaKnown RBP13.27□□□□□ -0.29
PDZD3-210ENST00000529098 TRACP01848 142 aa13.27□□□□□ -0.29
PDZD3-210ENST00000529098 C9orf85Q96MD7 179 aa13.26□□□□□ -0.29
PDZD3-210ENST00000529098 LRBAP50851 2863 aa13.25□□□□□ -0.29
PDZD3-210ENST00000529098 FAM104AQ969W3 186 aa13.25□□□□□ -0.29
PDZD3-210ENST00000529098 TINCRA0A1B0GVN0 87 aa13.24□□□□□ -0.29
PDZD3-210ENST00000529098 hADV29S1A0JD25 119 aa13.24□□□□□ -0.29
PDZD3-210ENST00000529098 UNQ9165/PRO28630Q6UXU0 137 aa13.24□□□□□ -0.29
PDZD3-210ENST00000529098 ABCA4P78363 2273 aa13.24□□□□□ -0.29
PDZD3-210ENST00000529098 IGHV3-16A0A0C4DH30 117 aa13.23□□□□□ -0.29
PDZD3-210ENST00000529098 INAFM2P0DMQ5 153 aa13.23□□□□□ -0.29
PDZD3-210ENST00000529098 TMEM258P61165 79 aa13.23□□□□□ -0.29
PDZD3-210ENST00000529098 PRRC2AP48634 2157 aaKnown RBP13.23□□□□□ -0.29
PDZD3-210ENST00000529098 ITPR1Q14643 2758 aa13.23□□□□□ -0.29
PDZD3-210ENST00000529098 FAM223BA6NKX1 122 aa13.23□□□□□ -0.29
PDZD3-210ENST00000529098 NDUFA4O00483 81 aa13.23□□□□□ -0.29
PDZD3-210ENST00000529098 BAALC-AS2P0C853 105 aa13.23□□□□□ -0.29
PDZD3-210ENST00000529098 FAM223AQ8IWN6 122 aa13.23□□□□□ -0.29
PDZD3-210ENST00000529098 CSMD1Q96PZ7 3565 aa13.23□□□□□ -0.29
PDZD3-210ENST00000529098 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.22□□□□□ -0.29
PDZD3-210ENST00000529098 A8MZ25 164 aa13.22□□□□□ -0.29
PDZD3-210ENST00000529098 TIRAPP58753 221 aa13.22□□□□□ -0.29
PDZD3-210ENST00000529098 BEAN1Q3B7T3 259 aa13.22□□□□□ -0.29
PDZD3-210ENST00000529098 TRAV12-3A0A0B4J271 114 aa13.22□□□□□ -0.29
PDZD3-210ENST00000529098 FAM222AQ5U5X8 452 aa13.22□□□□□ -0.29
PDZD3-210ENST00000529098 CIRBPQ14011 172 aaKnown RBP13.21□□□□□ -0.29
PDZD3-210ENST00000529098 DPH3Q96FX2 82 aa13.21□□□□□ -0.29
PDZD3-210ENST00000529098 DCHS2Q6V1P9 2916 aa13.2□□□□□ -0.3
PDZD3-210ENST00000529098 ANKHD1Q8IWZ3 2542 aaKnown RBP13.2□□□□□ -0.3
PDZD3-210ENST00000529098 GRNP28799 593 aaKnown RBP13.2□□□□□ -0.3
PDZD3-210ENST00000529098 NDUFA1O15239 70 aa13.19□□□□□ -0.3
PDZD3-210ENST00000529098 UCNP55089 124 aa13.19□□□□□ -0.3
PDZD3-210ENST00000529098 RPL18AQ02543 176 aaKnown RBP13.19□□□□□ -0.3
PDZD3-210ENST00000529098 C22orf24Q9Y442 160 aa13.19□□□□□ -0.3
PDZD3-210ENST00000529098 CACNA1AO00555 2505 aa13.19□□□□□ -0.3
PDZD3-210ENST00000529098 SPTBN1Q01082 2364 aaKnown RBP13.19□□□□□ -0.3
PDZD3-210ENST00000529098 LINC00308Q8TCZ7 52 aa13.19□□□□□ -0.3
PDZD3-210ENST00000529098 TACC2O95359 2948 aa13.19□□□□□ -0.3
PDZD3-210ENST00000529098 LY6HO94772 140 aa13.18□□□□□ -0.3
PDZD3-210ENST00000529098 CDSNQ15517 529 aa13.18□□□□□ -0.3
PDZD3-210ENST00000529098 CYSTM1Q9H1C7 97 aa13.18□□□□□ -0.3
PDZD3-210ENST00000529098 IGKV3-7A0A075B6H7 116 aa13.17□□□□□ -0.3
PDZD3-210ENST00000529098 IGHV3OR16-10A0A075B7F0 116 aa13.17□□□□□ -0.3
PDZD3-210ENST00000529098 LINC01560Q8TB33 94 aa13.17□□□□□ -0.3
PDZD3-210ENST00000529098 COPS9Q8WXC6 57 aa13.17□□□□□ -0.3
PDZD3-210ENST00000529098 TRBV12-3P01733 135 aa13.16□□□□□ -0.3
PDZD3-210ENST00000529098 RNASE13Q5GAN3 156 aaKnown RBP13.16□□□□□ -0.3
PDZD3-210ENST00000529098 SERP2Q8N6R1 65 aa13.16□□□□□ -0.3
PDZD3-210ENST00000529098 CCL21O00585 134 aa13.15□□□□□ -0.3
PDZD3-210ENST00000529098 KLRB1Q12918 225 aa13.15□□□□□ -0.3
PDZD3-210ENST00000529098 KIR2DL5BQ8NHK3 375 aa13.15□□□□□ -0.3
PDZD3-210ENST00000529098 C5orf56Q8N8D9 126 aa13.15□□□□□ -0.3
PDZD3-210ENST00000529098 SIRPDQ9H106 197 aa13.15□□□□□ -0.3
PDZD3-210ENST00000529098 HIVEP3Q5T1R4 2406 aa13.15□□□□□ -0.3
PDZD3-210ENST00000529098 C19orf54Q5BKX5 351 aa13.14□□□□□ -0.31
PDZD3-210ENST00000529098 UPK3BQ9BT76 320 aa13.14□□□□□ -0.31
PDZD3-210ENST00000529098 RHPN1-AS1Q9BWJ2 59 aa13.14□□□□□ -0.31
PDZD3-210ENST00000529098 Q8N2B8 174 aa13.14□□□□□ -0.31
PDZD3-210ENST00000529098 PKD1L2Q7Z442 2459 aa13.13□□□□□ -0.31
PDZD3-210ENST00000529098 HRNRQ86YZ3 2850 aaPredicted RBP13.13□□□□□ -0.31
PDZD3-210ENST00000529098 TRAV13-1A0A0B4J241 112 aa13.13□□□□□ -0.31
PDZD3-210ENST00000529098 ZNF415Q09FC8 603 aa13.12□□□□□ -0.31
PDZD3-210ENST00000529098 UBE2D4Q9Y2X8 147 aa13.12□□□□□ -0.31
PDZD3-210ENST00000529098 PF4V1P10720 104 aa13.11□□□□□ -0.31
PDZD3-210ENST00000529098 MALP21145 153 aa13.11□□□□□ -0.31
PDZD3-210ENST00000529098 ZFP36P26651 326 aaKnown RBP13.11□□□□□ -0.31
PDZD3-210ENST00000529098 ADORA2A-AS1P86434 159 aa13.11□□□□□ -0.31
PDZD3-210ENST00000529098 FAM218AQ96MZ4 157 aa13.11□□□□□ -0.31
PDZD3-210ENST00000529098 IGHV1OR15-1A0A075B7D0 117 aa13.11□□□□□ -0.31
PDZD3-210ENST00000529098 Q6JHZ5 121 aa13.11□□□□□ -0.31
PDZD3-210ENST00000529098 CDKN2A-AS1Q9UH64 79 aa13.11□□□□□ -0.31
PDZD3-210ENST00000529098 IGLV5-45A0A087WSX0 123 aa13.1□□□□□ -0.31
PDZD3-210ENST00000529098 IGHG2P01859 326 aa13.1□□□□□ -0.31
PDZD3-210ENST00000529098 OXTP01178 125 aa13.1□□□□□ -0.31
PDZD3-210ENST00000529098 SAA4P35542 130 aa13.1□□□□□ -0.31
PDZD3-210ENST00000529098 PRIMA1Q86XR5 153 aa13.1□□□□□ -0.31
PDZD3-210ENST00000529098 DNAL4O96015 105 aa13.09□□□□□ -0.31
PDZD3-210ENST00000529098 DSCR8Q96T75 97 aa13.09□□□□□ -0.31
PDZD3-210ENST00000529098 CHCHD7Q9BUK0 85 aa13.09□□□□□ -0.31
PDZD3-210ENST00000529098 Q9H8V8 135 aa13.09□□□□□ -0.31
PDZD3-210ENST00000529098 COL12A1Q99715 3063 aa13.08□□□□□ -0.31
PDZD3-210ENST00000529098 C4orf26Q17RF5 130 aa13.08□□□□□ -0.32
PDZD3-210ENST00000529098 SOSTDC1Q6X4U4 206 aa13.08□□□□□ -0.32
PDZD3-210ENST00000529098 TRAV12-2A0A075B6T6 113 aa13.08□□□□□ -0.32
PDZD3-210ENST00000529098 F5H768 121 aa13.07□□□□□ -0.32
PDZD3-210ENST00000529098 Q5XG85 94 aa13.07□□□□□ -0.32
PDZD3-210ENST00000529098 USMG5Q96IX5 58 aa13.07□□□□□ -0.32
PDZD3-210ENST00000529098 IGLV5-39A0A0G2JS06 123 aa13.06□□□□□ -0.32
PDZD3-210ENST00000529098 PRORYQ9H606 182 aa13.06□□□□□ -0.32
PDZD3-210ENST00000529098 MOB4Q9Y3A3 225 aa13.06□□□□□ -0.32
PDZD3-210ENST00000529098 IGKV3D-7A0A0C4DH55 119 aa13.06□□□□□ -0.32
PDZD3-210ENST00000529098 Q9HAA7 133 aa13.06□□□□□ -0.32
PDZD3-210ENST00000529098 HIST2H2BCQ6DN03 193 aa13.05□□□□□ -0.32
PDZD3-210ENST00000529098 HIST2H2BDQ6DRA6 164 aa13.05□□□□□ -0.32
PDZD3-210ENST00000529098 ASH1LQ9NR48 2969 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms