RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 CPSF1Q10570 1443 aaKnown RBP0.63□□□□□ -2.31
BRCA2-203ENST00000528762 F8P00451 2351 aa0.62□□□□□ -2.31
BRCA2-203ENST00000528762 MUC5ACP98088 5654 aa0.62□□□□□ -2.31
BRCA2-203ENST00000528762 TRGV1A0A0A0MS02 117 aa0.62□□□□□ -2.31
BRCA2-203ENST00000528762 S100PP25815 95 aa0.62□□□□□ -2.31
BRCA2-203ENST00000528762 GNG4P50150 75 aa0.62□□□□□ -2.31
BRCA2-203ENST00000528762 TPPP2P59282 170 aa0.62□□□□□ -2.31
BRCA2-203ENST00000528762 MRPL54Q6P161 138 aaKnown RBP0.62□□□□□ -2.31
BRCA2-203ENST00000528762 LINC00474Q9P2X8 69 aa0.62□□□□□ -2.31
BRCA2-203ENST00000528762 CACNA1EQ15878 2313 aa0.62□□□□□ -2.31
BRCA2-203ENST00000528762 POLQO75417 2590 aa0.62□□□□□ -2.31
BRCA2-203ENST00000528762 PZPP20742 1482 aa0.61□□□□□ -2.31
BRCA2-203ENST00000528762 CACNA1CQ13936 2221 aa0.61□□□□□ -2.31
BRCA2-203ENST00000528762 KTN1Q86UP2 1357 aaKnown RBP0.61□□□□□ -2.31
BRCA2-203ENST00000528762 SNAPC5O75971 98 aa0.61□□□□□ -2.31
BRCA2-203ENST00000528762 PPP3R1P63098 170 aa0.61□□□□□ -2.31
BRCA2-203ENST00000528762 C8orf59Q8N0T1 100 aaPredicted RBP0.61□□□□□ -2.31
BRCA2-203ENST00000528762 DPH3P1Q9H4G8 78 aa0.61□□□□□ -2.31
BRCA2-203ENST00000528762 GOLGA3Q08378 1498 aa0.61□□□□□ -2.31
BRCA2-203ENST00000528762 S100A1P23297 94 aa0.6□□□□□ -2.31
BRCA2-203ENST00000528762 C9orf153Q5TBE3 101 aa0.6□□□□□ -2.31
BRCA2-203ENST00000528762 Q5VV11 94 aa0.6□□□□□ -2.31
BRCA2-203ENST00000528762 COMMD6Q7Z4G1 85 aa0.6□□□□□ -2.31
BRCA2-203ENST00000528762 VMO1Q7Z5L0 202 aa0.6□□□□□ -2.31
BRCA2-203ENST00000528762 C14orf144Q96I85 54 aa0.6□□□□□ -2.31
BRCA2-203ENST00000528762 AQP10Q96PS8 301 aa0.6□□□□□ -2.31
BRCA2-203ENST00000528762 AHCTF1Q8WYP5 2266 aa0.6□□□□□ -2.31
BRCA2-203ENST00000528762 PPIP5K1Q6PFW1 1433 aa0.59□□□□□ -2.31
BRCA2-203ENST00000528762 TRAV1-2A0A0B4J238 106 aa0.59□□□□□ -2.31
BRCA2-203ENST00000528762 TMEM14DPA8MWL7 114 aa0.59□□□□□ -2.31
BRCA2-203ENST00000528762 SMIM6P0DI80 62 aa0.59□□□□□ -2.31
BRCA2-203ENST00000528762 CCL18P55774 89 aa0.59□□□□□ -2.31
BRCA2-203ENST00000528762 MRPS10P82664 201 aaKnown RBP0.59□□□□□ -2.31
BRCA2-203ENST00000528762 WHAMMP3Q1A5X7 153 aa0.59□□□□□ -2.31
BRCA2-203ENST00000528762 CYP4F30PQ9H0H9 118 aa0.59□□□□□ -2.31
BRCA2-203ENST00000528762 ZNF236Q9UL36 1845 aa0.59□□□□□ -2.32
BRCA2-203ENST00000528762 TET3O43151 1660 aa0.59□□□□□ -2.32
BRCA2-203ENST00000528762 NRKQ7Z2Y5 1582 aa0.58□□□□□ -2.32
BRCA2-203ENST00000528762 G3V318 75 aa0.58□□□□□ -2.32
BRCA2-203ENST00000528762 SSSCA1O60232 199 aa0.58□□□□□ -2.32
BRCA2-203ENST00000528762 C10orf128Q5T292 105 aa0.58□□□□□ -2.32
BRCA2-203ENST00000528762 TTC9CQ8N5M4 171 aa0.58□□□□□ -2.32
BRCA2-203ENST00000528762 PLXNB2O15031 1838 aa0.58□□□□□ -2.32
BRCA2-203ENST00000528762 FAM208BQ5VWN6 2430 aa0.58□□□□□ -2.32
BRCA2-203ENST00000528762 TTC28Q96AY4 2481 aa0.58□□□□□ -2.32
BRCA2-203ENST00000528762 MAPKBP1O60336 1514 aa0.58□□□□□ -2.32
BRCA2-203ENST00000528762 ABCA12Q86UK0 2595 aa0.57□□□□□ -2.32
BRCA2-203ENST00000528762 MRC1P22897 1456 aa0.57□□□□□ -2.32
BRCA2-203ENST00000528762 GCHFRP30047 84 aa0.57□□□□□ -2.32
BRCA2-203ENST00000528762 Q6ZRX8 168 aa0.57□□□□□ -2.32
BRCA2-203ENST00000528762 BAGE3Q86Y29 109 aa0.57□□□□□ -2.32
BRCA2-203ENST00000528762 TSLPQ969D9 159 aa0.57□□□□□ -2.32
BRCA2-203ENST00000528762 PROK2Q9HC23 129 aa0.57□□□□□ -2.32
BRCA2-203ENST00000528762 SPHKAPQ2M3C7 1700 aa0.57□□□□□ -2.32
BRCA2-203ENST00000528762 ZFYVE16Q7Z3T8 1539 aa0.57□□□□□ -2.32
BRCA2-203ENST00000528762 PIEZO1Q92508 2521 aa0.57□□□□□ -2.32
BRCA2-203ENST00000528762 C10orf71Q711Q0 1435 aa0.56□□□□□ -2.32
BRCA2-203ENST00000528762 USP24Q9UPU5 2620 aa0.56□□□□□ -2.32
BRCA2-203ENST00000528762 ZFHX3Q15911 3703 aa0.56□□□□□ -2.32
BRCA2-203ENST00000528762 TRBV7-3A0A075B6L6 115 aa0.56□□□□□ -2.32
BRCA2-203ENST00000528762 C20orf202A1L168 122 aa0.56□□□□□ -2.32
BRCA2-203ENST00000528762 KRTAP2-3P0C7H8 128 aa0.56□□□□□ -2.32
BRCA2-203ENST00000528762 HSD52Q0P140 79 aa0.56□□□□□ -2.32
BRCA2-203ENST00000528762 C12orf57Q99622 126 aa0.56□□□□□ -2.32
BRCA2-203ENST00000528762 KRTAP2-4Q9BYR9 128 aa0.56□□□□□ -2.32
BRCA2-203ENST00000528762 KRTAP2-1Q9BYU5 128 aa0.56□□□□□ -2.32
BRCA2-203ENST00000528762 LENEPQ9Y5L5 61 aa0.56□□□□□ -2.32
BRCA2-203ENST00000528762 SBF2Q86WG5 1849 aa0.56□□□□□ -2.32
BRCA2-203ENST00000528762 WNK3Q9BYP7 1800 aa0.56□□□□□ -2.32
BRCA2-203ENST00000528762 CELSR2Q9HCU4 2923 aa0.56□□□□□ -2.32
BRCA2-203ENST00000528762 TNCP24821 2201 aa0.56□□□□□ -2.32
BRCA2-203ENST00000528762 KIF21AQ7Z4S6 1674 aa0.56□□□□□ -2.32
BRCA2-203ENST00000528762 TPRP12270 2363 aaKnown RBP0.55□□□□□ -2.32
BRCA2-203ENST00000528762 UBE2L5PA0A1B0GUS4 154 aa0.55□□□□□ -2.32
BRCA2-203ENST00000528762 PPP1R17O96001 155 aa0.55□□□□□ -2.32
BRCA2-203ENST00000528762 NMBP08949 121 aa0.55□□□□□ -2.32
BRCA2-203ENST00000528762 IFITM1P13164 125 aa0.55□□□□□ -2.32
BRCA2-203ENST00000528762 UBE2L3P68036 154 aaKnown RBP0.55□□□□□ -2.32
BRCA2-203ENST00000528762 AMELXQ99217 191 aa0.55□□□□□ -2.32
BRCA2-203ENST00000528762 NDUFA4L2Q9NRX3 87 aa0.55□□□□□ -2.32
BRCA2-203ENST00000528762 CHD9Q3L8U1 2897 aa0.55□□□□□ -2.32
BRCA2-203ENST00000528762 KDM3BQ7LBC6 1761 aa0.55□□□□□ -2.32
BRCA2-203ENST00000528762 PLCE1Q9P212 2302 aa0.54□□□□□ -2.32
BRCA2-203ENST00000528762 ATP6V1G2-DDX39BF2Z307 99 aa0.54□□□□□ -2.32
BRCA2-203ENST00000528762 PRH1P02810 166 aa0.54□□□□□ -2.32
BRCA2-203ENST00000528762 R4GMQ9 66 aa0.54□□□□□ -2.32
BRCA2-203ENST00000528762 ZNF609O15014 1411 aa0.54□□□□□ -2.32
BRCA2-203ENST00000528762 MYO7BQ6PIF6 2116 aa0.53□□□□□ -2.32
BRCA2-203ENST00000528762 CC2D2AQ9P2K1 1620 aa0.53□□□□□ -2.32
BRCA2-203ENST00000528762 MYOM1P52179 1685 aa0.53□□□□□ -2.32
BRCA2-203ENST00000528762 LRRC37A2A6NM11 1700 aa0.53□□□□□ -2.32
BRCA2-203ENST00000528762 FAM24AA6NFZ4 105 aa0.53□□□□□ -2.32
BRCA2-203ENST00000528762 M0R135 149 aa0.53□□□□□ -2.32
BRCA2-203ENST00000528762 SPINK8P0C7L1 97 aa0.53□□□□□ -2.32
BRCA2-203ENST00000528762 DCDP81605 110 aaKnown RBP0.53□□□□□ -2.32
BRCA2-203ENST00000528762 SPAG11BQ08648 103 aa0.53□□□□□ -2.32
BRCA2-203ENST00000528762 SPAG11AQ6PDA7 123 aa0.53□□□□□ -2.32
BRCA2-203ENST00000528762 MGST2Q99735 147 aa0.53□□□□□ -2.32
BRCA2-203ENST00000528762 V9GYH0 126 aa0.53□□□□□ -2.32
BRCA2-203ENST00000528762 C2CD3Q4AC94 2353 aa0.53□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms