RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 RAPGEF6Q8TEU7 1601 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 ZFC3H1O60293 1989 aaKnown RBP0.95□□□□□ -2.26
CPNE3-207ENST00000523588 BLMP54132 1417 aaPredicted RBP0.95□□□□□ -2.26
CPNE3-207ENST00000523588 PPLO60437 1756 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 SETBP1Q9Y6X0 1596 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 SPHKAPQ2M3C7 1700 aa0.95□□□□□ -2.26
CPNE3-207ENST00000523588 ABCC2Q92887 1545 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 NCOA2Q15596 1464 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 CDK12Q9NYV4 1490 aaPredicted RBP0.94□□□□□ -2.26
CPNE3-207ENST00000523588 LAMC1P11047 1609 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 RNF17Q9BXT8 1623 aaKnown RBP0.94□□□□□ -2.26
CPNE3-207ENST00000523588 CC2D2AQ9P2K1 1620 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 BIVM-ERCC5R4GMW8 1640 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 SCN11AQ9UI33 1791 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 TRAV12-2A0A075B6T6 113 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 RBAKDNA6NC62 111 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 MCRIP1C9JLW8 97 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 CD3DP04234 171 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 PRB4P10163 310 aaPredicted RBP0.94□□□□□ -2.26
CPNE3-207ENST00000523588 SLC25A4P12235 298 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 HLA-DRB4P13762 266 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 POLR2JP52435 117 aaKnown RBP0.94□□□□□ -2.26
CPNE3-207ENST00000523588 LSM3P62310 102 aaKnown RBP0.94□□□□□ -2.26
CPNE3-207ENST00000523588 Q56UQ5 140 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 BVES-AS1Q5T3Y7 98 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 XAF1Q6GPH4 301 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 TMEM91Q6ZNR0 172 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 Q6ZS92 163 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 S100A16Q96FQ6 103 aaKnown RBP0.94□□□□□ -2.26
CPNE3-207ENST00000523588 AQP10Q96PS8 301 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 ST20Q9HBF5 79 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 SPCS1Q9Y6A9 102 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 SERP1Q9Y6X1 66 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 HLA-DRB4X5D2U9 266 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 ANKARQ7Z5J8 1434 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 ABCA8O94911 1581 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 DIP2CQ9Y2E4 1556 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 MON2Q7Z3U7 1717 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 DOCK1Q14185 1865 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 PLIN4Q96Q06 1357 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 CDK13Q14004 1512 aaKnown RBP0.94□□□□□ -2.26
CPNE3-207ENST00000523588 SYCP2Q9BX26 1530 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 DOCK2Q92608 1830 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 TANC2Q9HCD6 1990 aa0.94□□□□□ -2.26
CPNE3-207ENST00000523588 KDM3BQ7LBC6 1761 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 RGPD4Q7Z3J3 1758 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 PIK3C2BO00750 1634 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 CFTRP13569 1480 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 MUC4Q99102 2169 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 MARF1Q9Y4F3 1742 aaKnown RBP0.93□□□□□ -2.26
CPNE3-207ENST00000523588 PLXNC1O60486 1568 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 GLI2P10070 1586 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 LAMC3Q9Y6N6 1575 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 A0A087WWC5 75 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 APOC4-APOC2K7ER74 178 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 SNCGO76070 127 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 APOC2P02655 101 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 GYPAP02724 150 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 RBP4P02753 201 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 SFTA3P0C7M3 94 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 CCL4P13236 92 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 CBLN1P23435 193 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 SNRPD3P62318 126 aaKnown RBP0.93□□□□□ -2.26
CPNE3-207ENST00000523588 SEC11AP67812 179 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 WFDC2Q14508 124 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 ADIRFQ15847 76 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 VSTM2AQ8TAG5 236 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 DSCR8Q96T75 97 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 NAA60Q9H7X0 242 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 LSM2Q9Y333 95 aaKnown RBP0.93□□□□□ -2.26
CPNE3-207ENST00000523588 DNAJC15Q9Y5T4 150 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 V9GYH0 126 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 PATJQ8NI35 1801 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 ROBO1Q9Y6N7 1651 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 EFCAB5A4FU69 1503 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 ABCC6O95255 1503 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 HMGXB3Q12766 1538 aa0.93□□□□□ -2.26
CPNE3-207ENST00000523588 URB2Q14146 1524 aaKnown RBP0.93□□□□□ -2.26
CPNE3-207ENST00000523588 RGPD3A6NKT7 1758 aaPredicted RBP0.93□□□□□ -2.26
CPNE3-207ENST00000523588 LRRC9Q6ZRR7 1453 aa0.92□□□□□ -2.26
CPNE3-207ENST00000523588 NWD2Q9ULI1 1742 aa0.92□□□□□ -2.26
CPNE3-207ENST00000523588 ADGRB1O14514 1584 aa0.92□□□□□ -2.26
CPNE3-207ENST00000523588 TIAM1Q13009 1591 aa0.92□□□□□ -2.26
CPNE3-207ENST00000523588 IQGAP2Q13576 1575 aa0.92□□□□□ -2.26
CPNE3-207ENST00000523588 WIZO95785 1651 aa0.92□□□□□ -2.26
CPNE3-207ENST00000523588 TRBV7-7A0A0K0K1E9 115 aa0.92□□□□□ -2.26
CPNE3-207ENST00000523588 hADV29S1A0JD25 119 aa0.92□□□□□ -2.26
CPNE3-207ENST00000523588 FAM24AA6NFZ4 105 aa0.92□□□□□ -2.26
CPNE3-207ENST00000523588 SYS1-DBNDD2H3BUS1 97 aa0.92□□□□□ -2.26
CPNE3-207ENST00000523588 H3BUT2 72 aa0.92□□□□□ -2.26
CPNE3-207ENST00000523588 GNGT2O14610 69 aa0.92□□□□□ -2.26
CPNE3-207ENST00000523588 HBDP02042 147 aa0.92□□□□□ -2.26
CPNE3-207ENST00000523588 GYPBP06028 91 aa0.92□□□□□ -2.26
CPNE3-207ENST00000523588 FAUP35544 74 aaKnown RBP0.92□□□□□ -2.26
CPNE3-207ENST00000523588 ASIPP42127 132 aa0.92□□□□□ -2.26
CPNE3-207ENST00000523588 ETDBQ3ZM63 59 aa0.92□□□□□ -2.26
CPNE3-207ENST00000523588 SPINK9Q5DT21 86 aa0.92□□□□□ -2.26
CPNE3-207ENST00000523588 NMSQ5H8A3 153 aa0.92□□□□□ -2.26
CPNE3-207ENST00000523588 LINC01545Q5VT33 79 aa0.92□□□□□ -2.26
CPNE3-207ENST00000523588 MIC13Q5XKP0 118 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms