RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 SYS1-DBNDD2H3BUS1 97 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 DSCR4P56555 118 aaPredicted RBP1.08□□□□□ -2.24
PCM1-219ENST00000523540 GNG11P61952 73 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 Q1T7F1 81 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 ETDBQ3ZM63 59 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 BVES-AS1Q5T3Y7 98 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 SLC48A1Q6P1K1 146 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 HEPN1Q6WQI6 88 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 LINC00269Q8N2A0 174 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 SERP2Q8N6R1 65 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 TMEM141Q96I45 108 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 AMELYQ99218 206 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 MRPL35Q9NZE8 188 aaKnown RBP1.08□□□□□ -2.24
PCM1-219ENST00000523540 CACFD1Q9UGQ2 172 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 DLG5Q8TDM6 1919 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 ABCC1P33527 1531 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 CDK13Q14004 1512 aaKnown RBP1.08□□□□□ -2.24
PCM1-219ENST00000523540 URB2Q14146 1524 aaKnown RBP1.08□□□□□ -2.24
PCM1-219ENST00000523540 A0A1B0GUL6 1792 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 UNC13BO14795 1591 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 KDM6BO15054 1643 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 SNRNP200O75643 2136 aaKnown RBP1.07□□□□□ -2.24
PCM1-219ENST00000523540 EDC4Q6P2E9 1401 aaKnown RBP1.07□□□□□ -2.24
PCM1-219ENST00000523540 KIF1AQ12756 1690 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 LRRC9Q6ZRR7 1453 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 FANCD2Q9BXW9 1451 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 NRXN1Q9ULB1 1477 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.07□□□□□ -2.24
PCM1-219ENST00000523540 DUOX2Q9NRD8 1548 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 IGKV2-40A0A087WW87 121 aaPredicted RBP1.07□□□□□ -2.24
PCM1-219ENST00000523540 TRAV17A0A0B4J275 112 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 TRBV10-3A0A0K0K1G6 114 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 A6NIN4 97 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 E7EUB6 86 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 NDUFC1O43677 76 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 IGKV2D-40P01614 121 aaPredicted RBP1.07□□□□□ -2.24
PCM1-219ENST00000523540 BAALC-AS2P0C853 105 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 PRB4P10163 310 aaPredicted RBP1.07□□□□□ -2.24
PCM1-219ENST00000523540 UBE2G1P62253 170 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 SPATA45Q537H7 98 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 KRTAP5-10Q6L8G5 202 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 ZNF826PQ6ZT77 177 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 SPTSSBQ8NFR3 76 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 TMEM254Q8TBM7 123 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 TRGV9Q99603 122 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 NXT2Q9NPJ8 142 aaKnown RBP1.07□□□□□ -2.24
PCM1-219ENST00000523540 LINC00474Q9P2X8 69 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 HEATR5BQ9P2D3 2071 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 LAMA4Q16363 1823 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 PLXNC1O60486 1568 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 PDCD11Q14690 1871 aaKnown RBP1.07□□□□□ -2.24
PCM1-219ENST00000523540 PLCH1Q4KWH8 1693 aa1.07□□□□□ -2.24
PCM1-219ENST00000523540 IQSEC2Q5JU85 1478 aa1.06□□□□□ -2.24
PCM1-219ENST00000523540 AFDNP55196 1824 aaKnown RBP1.06□□□□□ -2.24
PCM1-219ENST00000523540 TOP2AP11388 1531 aaKnown RBP1.06□□□□□ -2.24
PCM1-219ENST00000523540 KCPQ6ZWJ8 1503 aa1.06□□□□□ -2.24
PCM1-219ENST00000523540 INTS1Q8N201 2190 aaKnown RBP1.06□□□□□ -2.24
PCM1-219ENST00000523540 A0A087WSZ3 146 aa1.06□□□□□ -2.24
PCM1-219ENST00000523540 TRAV13-2A0A0B4J235 113 aa1.06□□□□□ -2.24
PCM1-219ENST00000523540 KANTRA0A1W2PQU2 76 aa1.06□□□□□ -2.24
PCM1-219ENST00000523540 TCRBV4S1A1TA0A5B7 111 aa1.06□□□□□ -2.24
PCM1-219ENST00000523540 H3BUT2 72 aa1.06□□□□□ -2.24
PCM1-219ENST00000523540 CCL16O15467 120 aa1.06□□□□□ -2.24
PCM1-219ENST00000523540 ERC2-IT1O76042 136 aa1.06□□□□□ -2.24
PCM1-219ENST00000523540 MIFP14174 115 aa1.06□□□□□ -2.24
PCM1-219ENST00000523540 WFDC2Q14508 124 aa1.06□□□□□ -2.24
PCM1-219ENST00000523540 MPV17LQ2QL34 196 aa1.06□□□□□ -2.24
PCM1-219ENST00000523540 NMSQ5H8A3 153 aa1.06□□□□□ -2.24
PCM1-219ENST00000523540 C2orf82Q6UX34 121 aa1.06□□□□□ -2.24
PCM1-219ENST00000523540 ZCCHC23Q6ZST2 131 aa1.06□□□□□ -2.24
PCM1-219ENST00000523540 C9orf163Q8N9P6 203 aa1.06□□□□□ -2.24
PCM1-219ENST00000523540 OR8B3Q8NGG8 313 aa1.06□□□□□ -2.24
PCM1-219ENST00000523540 PIK3C2BO00750 1634 aa1.06□□□□□ -2.24
PCM1-219ENST00000523540 RNF17Q9BXT8 1623 aaKnown RBP1.06□□□□□ -2.24
PCM1-219ENST00000523540 ZNF142P52746 1687 aaPredicted RBP1.06□□□□□ -2.24
PCM1-219ENST00000523540 ITSN2Q9NZM3 1697 aa1.06□□□□□ -2.24
PCM1-219ENST00000523540 XRN1Q8IZH2 1706 aaKnown RBP1.06□□□□□ -2.24
PCM1-219ENST00000523540 DIP2CQ9Y2E4 1556 aa1.05□□□□□ -2.24
PCM1-219ENST00000523540 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
PCM1-219ENST00000523540 COL4A6Q14031 1691 aa1.05□□□□□ -2.24
PCM1-219ENST00000523540 PREX1Q8TCU6 1659 aa1.05□□□□□ -2.24
PCM1-219ENST00000523540 A0A087WXM4 84 aa1.05□□□□□ -2.24
PCM1-219ENST00000523540 TRBV7-1A0A0A6YYK4 115 aa1.05□□□□□ -2.24
PCM1-219ENST00000523540 TRAV10A0A0B4J240 114 aa1.05□□□□□ -2.24
PCM1-219ENST00000523540 HCG22E2RYF7 251 aa1.05□□□□□ -2.24
PCM1-219ENST00000523540 SIX6O95475 246 aa1.05□□□□□ -2.24
PCM1-219ENST00000523540 ASAH2BP0C7U1 165 aa1.05□□□□□ -2.24
PCM1-219ENST00000523540 CXCL8P10145 99 aa1.05□□□□□ -2.24
PCM1-219ENST00000523540 SNRPFP62306 86 aaKnown RBP1.05□□□□□ -2.24
PCM1-219ENST00000523540 MIR22HGQ0VDD5 57 aa1.05□□□□□ -2.24
PCM1-219ENST00000523540 PMCHL1Q16048 86 aa1.05□□□□□ -2.24
PCM1-219ENST00000523540 DEFB113Q30KQ7 82 aa1.05□□□□□ -2.24
PCM1-219ENST00000523540 C9orf116Q5BN46 136 aaPredicted RBP1.05□□□□□ -2.24
PCM1-219ENST00000523540 CYP2G1PQ6ZSU1 146 aa1.05□□□□□ -2.24
PCM1-219ENST00000523540 MED12LQ86YW9 2145 aa1.05□□□□□ -2.24
PCM1-219ENST00000523540 C18orf32Q8TCD1 76 aa1.05□□□□□ -2.24
PCM1-219ENST00000523540 CYP4F30PQ9H0H9 118 aa1.05□□□□□ -2.24
PCM1-219ENST00000523540 CDC42SE1Q9NRR8 79 aa1.05□□□□□ -2.24
PCM1-219ENST00000523540 SIPA1L3O60292 1781 aaPredicted RBP1.05□□□□□ -2.24
PCM1-219ENST00000523540 ARFGEF1Q9Y6D6 1849 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms