RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 CEMP1Q6PRD7 247 aaPredicted RBP9.77□□□□□ -0.84
PCDHGB1-201ENST00000523390 ODF3Q96PU9 254 aa9.77□□□□□ -0.84
PCDHGB1-201ENST00000523390 SCRT2Q9NQ03 307 aa9.77□□□□□ -0.84
PCDHGB1-201ENST00000523390 SIVA1O15304 175 aa9.77□□□□□ -0.85
PCDHGB1-201ENST00000523390 MRPL23Q16540 153 aaKnown RBP9.77□□□□□ -0.85
PCDHGB1-201ENST00000523390 AMTNQ6UX39 209 aa9.77□□□□□ -0.85
PCDHGB1-201ENST00000523390 TOMM6Q96B49 74 aa9.77□□□□□ -0.85
PCDHGB1-201ENST00000523390 Q9HAA7 133 aa9.77□□□□□ -0.85
PCDHGB1-201ENST00000523390 C11orf86A6NJI1 115 aa9.77□□□□□ -0.85
PCDHGB1-201ENST00000523390 RBX1P62877 108 aa9.77□□□□□ -0.85
PCDHGB1-201ENST00000523390 PRO1854Q9UHT4 67 aa9.77□□□□□ -0.85
PCDHGB1-201ENST00000523390 C20orf203Q8NBC4 194 aa9.77□□□□□ -0.85
PCDHGB1-201ENST00000523390 ZNF292O60281 2723 aa9.76□□□□□ -0.85
PCDHGB1-201ENST00000523390 F8W735 103 aaPredicted RBP9.76□□□□□ -0.85
PCDHGB1-201ENST00000523390 TAL2Q16559 108 aa9.76□□□□□ -0.85
PCDHGB1-201ENST00000523390 USP34Q70CQ2 3546 aa9.76□□□□□ -0.85
PCDHGB1-201ENST00000523390 TIMM17AQ99595 171 aa9.76□□□□□ -0.85
PCDHGB1-201ENST00000523390 EYSQ5T1H1 3165 aa9.76□□□□□ -0.85
PCDHGB1-201ENST00000523390 C12orf74Q32Q52 190 aa9.75□□□□□ -0.85
PCDHGB1-201ENST00000523390 LINC00482Q8N8I6 264 aa9.75□□□□□ -0.85
PCDHGB1-201ENST00000523390 WDFY4Q6ZS81 3184 aa9.75□□□□□ -0.85
PCDHGB1-201ENST00000523390 IGKV2D-24A0A075B6R9 120 aa9.75□□□□□ -0.85
PCDHGB1-201ENST00000523390 WFDC10AQ9H1F0 79 aa9.75□□□□□ -0.85
PCDHGB1-201ENST00000523390 ETDBQ3ZM63 59 aa9.75□□□□□ -0.85
PCDHGB1-201ENST00000523390 GHRHP01286 108 aa9.74□□□□□ -0.85
PCDHGB1-201ENST00000523390 PRM2P04554 102 aa9.74□□□□□ -0.85
PCDHGB1-201ENST00000523390 ICOSQ9Y6W8 199 aa9.74□□□□□ -0.85
PCDHGB1-201ENST00000523390 F8P00451 2351 aa9.74□□□□□ -0.85
PCDHGB1-201ENST00000523390 TRAV8-4A0A0B4J246 113 aa9.74□□□□□ -0.85
PCDHGB1-201ENST00000523390 MRPS12O15235 138 aaKnown RBP9.74□□□□□ -0.85
PCDHGB1-201ENST00000523390 HILS1P60008 231 aa9.74□□□□□ -0.85
PCDHGB1-201ENST00000523390 C10orf126Q8N4M7 172 aa9.74□□□□□ -0.85
PCDHGB1-201ENST00000523390 IGHV3-30P01768 117 aa9.74□□□□□ -0.85
PCDHGB1-201ENST00000523390 IGHV3-33P01772 117 aa9.74□□□□□ -0.85
PCDHGB1-201ENST00000523390 IGHV3-30-3P0DP02 117 aa9.74□□□□□ -0.85
PCDHGB1-201ENST00000523390 IGHV3-30-5P0DP03 117 aa9.74□□□□□ -0.85
PCDHGB1-201ENST00000523390 MRGPRG-AS1Q2M3A8 158 aa9.74□□□□□ -0.85
PCDHGB1-201ENST00000523390 SLC25A29Q8N8R3 303 aa9.74□□□□□ -0.85
PCDHGB1-201ENST00000523390 SIGMAR1Q99720 223 aa9.74□□□□□ -0.85
PCDHGB1-201ENST00000523390 MGAQ8IWI9 3026 aa9.74□□□□□ -0.85
PCDHGB1-201ENST00000523390 TRAV12-1A0A0B4J245 112 aa9.73□□□□□ -0.85
PCDHGB1-201ENST00000523390 K7EP34 96 aa9.73□□□□□ -0.85
PCDHGB1-201ENST00000523390 LAMTOR3Q9UHA4 124 aa9.73□□□□□ -0.85
PCDHGB1-201ENST00000523390 A0A1W2PPM0 123 aa9.73□□□□□ -0.85
PCDHGB1-201ENST00000523390 DCANP1Q8TF63 244 aa9.73□□□□□ -0.85
PCDHGB1-201ENST00000523390 MYO15AQ9UKN7 3530 aa9.73□□□□□ -0.85
PCDHGB1-201ENST00000523390 VSIG2Q96IQ7 327 aa9.73□□□□□ -0.85
PCDHGB1-201ENST00000523390 H3BMG7 143 aa9.72□□□□□ -0.85
PCDHGB1-201ENST00000523390 RNF185Q96GF1 192 aa9.72□□□□□ -0.85
PCDHGB1-201ENST00000523390 TRAV4A0A0B4J268 109 aa9.72□□□□□ -0.85
PCDHGB1-201ENST00000523390 PRO0255Q9UI72 69 aa9.72□□□□□ -0.85
PCDHGB1-201ENST00000523390 REV3LO60673 3130 aa9.72□□□□□ -0.85
PCDHGB1-201ENST00000523390 RNASE3P12724 160 aaKnown RBP9.72□□□□□ -0.85
PCDHGB1-201ENST00000523390 PROK1P58294 105 aa9.72□□□□□ -0.85
PCDHGB1-201ENST00000523390 FXYD2P54710 66 aa9.71□□□□□ -0.85
PCDHGB1-201ENST00000523390 TRBV10-1A0A0K0K1A3 114 aa9.71□□□□□ -0.86
PCDHGB1-201ENST00000523390 FAM222AQ5U5X8 452 aa9.71□□□□□ -0.86
PCDHGB1-201ENST00000523390 Q6ZUT4 128 aa9.71□□□□□ -0.86
PCDHGB1-201ENST00000523390 DAND5Q8N907 189 aa9.71□□□□□ -0.86
PCDHGB1-201ENST00000523390 TRBV20-1A0A075B6N2 111 aa9.7□□□□□ -0.86
PCDHGB1-201ENST00000523390 C1orf43Q9BWL3 253 aa9.7□□□□□ -0.86
PCDHGB1-201ENST00000523390 E9PLD3 99 aa9.7□□□□□ -0.86
PCDHGB1-201ENST00000523390 GAS8-AS1O95177 125 aa9.7□□□□□ -0.86
PCDHGB1-201ENST00000523390 BOD1L2Q8IYS8 172 aa9.7□□□□□ -0.86
PCDHGB1-201ENST00000523390 KLLNB2CW77 178 aa9.7□□□□□ -0.86
PCDHGB1-201ENST00000523390 EDA2RQ9HAV5 297 aa9.7□□□□□ -0.86
PCDHGB1-201ENST00000523390 TEX48A0A1B0GUV7 120 aa9.69□□□□□ -0.86
PCDHGB1-201ENST00000523390 A4D1N5 150 aa9.69□□□□□ -0.86
PCDHGB1-201ENST00000523390 CRIP2P52943 208 aaPredicted RBP9.69□□□□□ -0.86
PCDHGB1-201ENST00000523390 URB1-AS1Q96HZ7 61 aa9.69□□□□□ -0.86
PCDHGB1-201ENST00000523390 CFC1BP0CG36 223 aa9.68□□□□□ -0.86
PCDHGB1-201ENST00000523390 CFC1P0CG37 223 aa9.68□□□□□ -0.86
PCDHGB1-201ENST00000523390 KLK12Q9UKR0 248 aa9.68□□□□□ -0.86
PCDHGB1-201ENST00000523390 M0QY20 66 aa9.68□□□□□ -0.86
PCDHGB1-201ENST00000523390 MUSTN1Q8IVN3 82 aa9.68□□□□□ -0.86
PCDHGB1-201ENST00000523390 NBEAQ8NFP9 2946 aa9.68□□□□□ -0.86
PCDHGB1-201ENST00000523390 COX7A2LO14548 114 aa9.68□□□□□ -0.86
PCDHGB1-201ENST00000523390 NKAPP1Q8N9T2 125 aa9.68□□□□□ -0.86
PCDHGB1-201ENST00000523390 SPTBN5Q9NRC6 3674 aaKnown RBP9.67□□□□□ -0.86
PCDHGB1-201ENST00000523390 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.67□□□□□ -0.86
PCDHGB1-201ENST00000523390 TRAV26-1A0A087WT03 109 aa9.67□□□□□ -0.86
PCDHGB1-201ENST00000523390 CFAP126Q5VTH2 177 aa9.66□□□□□ -0.86
PCDHGB1-201ENST00000523390 RMI2Q96E14 147 aa9.66□□□□□ -0.86
PCDHGB1-201ENST00000523390 OVOL2Q9BRP0 275 aa9.66□□□□□ -0.86
PCDHGB1-201ENST00000523390 LINC00467Q9BRT7 94 aa9.66□□□□□ -0.86
PCDHGB1-201ENST00000523390 PRSS47A8MTI9 375 aa9.66□□□□□ -0.86
PCDHGB1-201ENST00000523390 SH2D6Q7Z4S9 175 aa9.66□□□□□ -0.86
PCDHGB1-201ENST00000523390 NEXN-AS1Q8NBZ9 246 aa9.66□□□□□ -0.86
PCDHGB1-201ENST00000523390 FRYLO94915 3013 aa9.66□□□□□ -0.86
PCDHGB1-201ENST00000523390 CCL18P55774 89 aa9.66□□□□□ -0.86
PCDHGB1-201ENST00000523390 AGRNO00468 2067 aa9.66□□□□□ -0.86
PCDHGB1-201ENST00000523390 TRAV13-2A0A0B4J235 113 aa9.65□□□□□ -0.86
PCDHGB1-201ENST00000523390 HERV-K104P63124 156 aa9.65□□□□□ -0.86
PCDHGB1-201ENST00000523390 COX7B2Q8TF08 81 aa9.65□□□□□ -0.86
PCDHGB1-201ENST00000523390 FAM110AQ9BQ89 295 aa9.65□□□□□ -0.86
PCDHGB1-201ENST00000523390 U3KQK5 164 aa9.65□□□□□ -0.86
PCDHGB1-201ENST00000523390 IGLL5B9A064 214 aa9.65□□□□□ -0.87
PCDHGB1-201ENST00000523390 ODF3L2Q3SX64 289 aa9.65□□□□□ -0.87
PCDHGB1-201ENST00000523390 GAGE2AQ6NT46 116 aa9.65□□□□□ -0.87
PCDHGB1-201ENST00000523390 NRACQ8N912 160 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms