RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 SLC25A16P16260 332 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 ZNF816Q0VGE8 651 aaPredicted RBP2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 RHOHQ15669 191 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 Q6ZS52 159 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 Q8NDZ9 215 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 GABARAPL1Q9H0R8 117 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 HIGD1BQ9P298 99 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 XIRP2A4UGR9 3374 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 MUC6Q6W4X9 2439 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 CACNA1EQ15878 2313 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 ASXL3Q9C0F0 2248 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 PCNX2A6NKB5 2137 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 PLXNB1O43157 2135 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 FAM186AA6NE01 2351 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 VCANP13611 3396 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 C17orf51A8MQB3 221 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 B4DSR2 109 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 GNRH2O43555 120 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 SLC25A20O43772 301 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 LY6HO94772 140 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 NPYP01303 97 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 TRGV3P03979 118 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 RNASE2P10153 161 aaKnown RBP2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 PIPP12273 146 aaPredicted RBP2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 EFNA4P52798 201 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 KRTDAPP60985 99 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 MIAQ16674 131 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 MPV17LQ2QL34 196 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 S100A7L2Q5SY68 101 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 DEFB119Q8N690 84 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 TMEM105Q8N8V8 129 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 SMCR5Q8TEV8 140 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 CST11Q9H112 138 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 NXT2Q9NPJ8 142 aaKnown RBP2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 MRPL35Q9NZE8 188 aaKnown RBP2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 CACNA1DQ01668 2161 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 CACNA1HO95180 2353 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 SPTBP11277 2137 aa2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 PTPRZ1P23471 2315 aaPredicted RBP2.5□□□□□ -2.01
CTNNA1-238ENST00000523298 MDC1Q14676 2089 aaKnown RBP2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 CNOT1A5YKK6 2376 aaKnown RBP2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 IGKV2D-26A0A0A0MRZ7 120 aa2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 A6NED7 52 aa2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 F2Z2F3 143 aa2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 SH2D1AO60880 128 aa2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 MSMBP08118 114 aa2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 KRTAP10-10P60014 251 aa2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 SDIM1Q6ZPB5 146 aa2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 TMEM136Q6ZRR5 245 aa2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 Q8IYB0 196 aa2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 DYNAPQ8N1N2 210 aa2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 LINC00269Q8N2A0 174 aa2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 FAM19A2Q8N3H0 131 aa2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 Q8N814 137 aa2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 RNF5Q99942 180 aa2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 SLC50A1Q9BRV3 221 aa2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 SCRT1Q9BWW7 348 aa2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 NDUFA12Q9UI09 145 aa2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 TMEM14AQ9Y6G1 99 aa2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 HEATR5BQ9P2D3 2071 aa2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 RIF1Q5UIP0 2472 aaKnown RBP2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 SCN3AQ9NY46 2000 aa2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 EP300Q09472 2414 aaPredicted RBP2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 SEC16AO15027 2179 aa2.49□□□□□ -2.01
CTNNA1-238ENST00000523298 USP34Q70CQ2 3546 aa2.48□□□□□ -2.01
CTNNA1-238ENST00000523298 SPTBN2O15020 2390 aa2.48□□□□□ -2.01
CTNNA1-238ENST00000523298 hDV103S1A0JD37 113 aa2.48□□□□□ -2.01
CTNNA1-238ENST00000523298 CLPSP04118 112 aa2.48□□□□□ -2.01
CTNNA1-238ENST00000523298 SMIM13P0DJ93 91 aa2.48□□□□□ -2.01
CTNNA1-238ENST00000523298 SPANXN1Q5VSR9 72 aa2.48□□□□□ -2.01
CTNNA1-238ENST00000523298 NCBP2-AS2Q69YL0 99 aa2.48□□□□□ -2.01
CTNNA1-238ENST00000523298 LYPD5Q6UWN5 251 aa2.48□□□□□ -2.01
CTNNA1-238ENST00000523298 C2orf91Q6ZV80 131 aa2.48□□□□□ -2.01
CTNNA1-238ENST00000523298 Q96M85 177 aa2.48□□□□□ -2.01
CTNNA1-238ENST00000523298 LINC00467Q9BRT7 94 aa2.48□□□□□ -2.01
CTNNA1-238ENST00000523298 MED12LQ86YW9 2145 aa2.48□□□□□ -2.01
CTNNA1-238ENST00000523298 KNTC1P50748 2209 aa2.48□□□□□ -2.01
CTNNA1-238ENST00000523298 OTOGLQ3ZCN5 2332 aa2.47□□□□□ -2.01
CTNNA1-238ENST00000523298 TRAV13-2A0A0B4J235 113 aa2.47□□□□□ -2.01
CTNNA1-238ENST00000523298 TCRBV4S1A1TA0A5B7 111 aa2.47□□□□□ -2.01
CTNNA1-238ENST00000523298 CRYM-AS1A6NIL9 109 aa2.47□□□□□ -2.01
CTNNA1-238ENST00000523298 H3BMM0 161 aa2.47□□□□□ -2.01
CTNNA1-238ENST00000523298 H7BZZ5 65 aa2.47□□□□□ -2.01
CTNNA1-238ENST00000523298 IGHV1-46P01743 117 aa2.47□□□□□ -2.01
CTNNA1-238ENST00000523298 RPL28P46779 137 aaKnown RBP2.47□□□□□ -2.01
CTNNA1-238ENST00000523298 ESRGQ1W209 222 aa2.47□□□□□ -2.01
CTNNA1-238ENST00000523298 KRTAP13-2Q52LG2 175 aa2.47□□□□□ -2.01
CTNNA1-238ENST00000523298 C1orf64Q8NEQ6 169 aa2.47□□□□□ -2.01
CTNNA1-238ENST00000523298 UBE2WQ96B02 151 aa2.47□□□□□ -2.01
CTNNA1-238ENST00000523298 TMEM141Q96I45 108 aa2.47□□□□□ -2.01
CTNNA1-238ENST00000523298 LINC00574Q9H8X3 128 aa2.47□□□□□ -2.01
CTNNA1-238ENST00000523298 COL5A1P20908 1838 aaPredicted RBP2.47□□□□□ -2.01
CTNNA1-238ENST00000523298 IGHV3-15A0A0B4J1V0 119 aa2.46□□□□□ -2.02
CTNNA1-238ENST00000523298 IGHV1-3A0A0C4DH29 117 aa2.46□□□□□ -2.02
CTNNA1-238ENST00000523298 C16orf90A8MZG2 172 aa2.46□□□□□ -2.02
CTNNA1-238ENST00000523298 NDUFC1O43677 76 aa2.46□□□□□ -2.02
CTNNA1-238ENST00000523298 CPSF4O95639 269 aaKnown RBP2.46□□□□□ -2.02
CTNNA1-238ENST00000523298 XCL1P47992 114 aa2.46□□□□□ -2.02
CTNNA1-238ENST00000523298 DSCR4P56555 118 aaPredicted RBP2.46□□□□□ -2.02
CTNNA1-238ENST00000523298 ROMO1P60602 79 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms